Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10n01f
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   1.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.7  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.5  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 566 MQ*APDVFANKSLSVCSPLSVQYFVKL-RNFS 474
           MQ  P+  +NKS S+  PLS+    +L  NFS
Sbjct: 26  MQDEPENLSNKSNSITVPLSISTGQRLPANFS 57


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 341 SSMYCIIAIDSTKVTPSISRAGTFCAGLMAL-YSSVSCLPVFTISTGRSSKGMLFACSI 168
           S ++C++  +  +    +S+A +FC  + AL Y SV+   +  + T  ++  +L   S+
Sbjct: 20  SEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTFFALSELLTDLATSILLKVSSL 78


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 508 ERGLQTLNDLLAKTSGAYCIGDQITL 585
           ERG+ T N ++   S   C GD++ +
Sbjct: 161 ERGILTANRMIPGPSIQVCEGDKVVI 186


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 508 ERGLQTLNDLLAKTSGAYCIGDQITL 585
           ERG+ T N ++   S   C GD++ +
Sbjct: 161 ERGILTANRMIPGPSIQVCEGDKVVI 186


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/12 (66%), Positives = 12/12 (100%)
 Frame = +2

Query: 545 KHQELTASEIKL 580
           +H++LTA+EIKL
Sbjct: 116 RHEKLTAAEIKL 127


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 60  IFCAVSVYDCFLTREDL 10
           + C VS   C+L R +L
Sbjct: 225 LLCVVSTLSCYLERTEL 241


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -3

Query: 235 AVYQFLQYPPDVLRKVCFLHVALLEHATNTKTANRRAKSHDFQ 107
           A++   +YP   +R+   L + L E        NRRAK    Q
Sbjct: 86  ALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 128


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 342 YET*TETHARHSTTTRPYERNMRDY-CI 422
           Y+   E H R+   ++P++ N  DY C+
Sbjct: 242 YKHHLEYHLRNHAGSKPFQCNKCDYTCV 269


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 150 TRRQPIGVQNHTIFNH 103
           T  QP+G Q H   NH
Sbjct: 188 TSSQPVGTQIHQQTNH 203


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 416 LYPVYNHYKISV*RNIWER 472
           L P YN  K S+   +W++
Sbjct: 23  LVPYYNFEKFSLEHQLWQK 41


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 164 EQCYMQKAYLSKNVRWIL*KLVN 232
           E+ ++  AY+SK  RW L + +N
Sbjct: 259 EKEFLFNAYVSKQKRWELARNLN 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,383
Number of Sequences: 336
Number of extensions: 3201
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)