Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10n01f
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 38 0.001
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 36 0.005
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 33 0.034
SPCC1183.02 |||glutathione S-transferase |Schizosaccharomyces po... 31 0.18
SPBC16D10.01c ||SPBC418.03c|conserved fungal protein|Schizosacch... 27 2.2
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 26 5.2
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 25 6.8
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 6.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 6.8
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 9.0
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 37.9 bits (84), Expect = 0.001
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +1
Query: 118 VILHAYWLSSCSWRVRAMLHAKSIPFEERPVDIVKTGKQLTEEYRAINPAQKVPALEIDG 297
++LH + +S S R+ ML +P+E + D + + Y ++P K P + DG
Sbjct: 2 IVLH-HLKNSRSTRIVWMLEELKVPYEIKVYD--RVDGRAPPAYTKLSPLGKSPIVVDDG 58
Query: 298 VTLVESMAIIQYI 336
VT +ES AI++++
Sbjct: 59 VTYIESAAILEHL 71
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 35.9 bits (79), Expect = 0.005
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Frame = +1
Query: 154 WRVRAMLHAKSIPFEERPVDIVKTGKQLTEEYRAINPAQKVPAL---EIDGVTLVESMAI 324
W+V L ++ +E+ D K G+Q +E+ A+NP +VP L + + T+ ES AI
Sbjct: 16 WKVVLALKELNLSYEQIFYDFQK-GEQKCKEHLALNPNGRVPTLVDHKNNDYTIWESDAI 74
Query: 325 IQYIE---DTRPEPKLMPDTALQRARMREICETIVSGIQPL-QNFGLKKHLGTEEKFLSF 492
+ Y+ DT + L D + ++ + SG + G E +
Sbjct: 75 LIYLADKYDTDRKISLSFDDP-EYYKLIQYLFFQASGQGVIWGQAGWFNFFHHEPVVSAV 133
Query: 493 TKYWTE--RGLQTLNDLLAKTSGAYCIGDQITLADICLVPQIYN 618
T+Y E R L L D+L Y + ++ T+AD+ +P YN
Sbjct: 134 TRYRNEIKRVLGVLEDILKDRD--YLVANKYTIADLSFIPWNYN 175
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 33.1 bits (72), Expect = 0.034
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 154 WRVRAMLHAKSIPFEERPVDIVKTGKQLTEEYRAINPAQKVPAL---EIDGVTLVESMAI 324
W+V L + +E R V+ K +Q + E+ A+NP +VP L + T+ ES AI
Sbjct: 16 WKVVQALKELDLTYETRYVNFSKN-EQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAI 74
Query: 325 IQYIED 342
+ Y+ D
Sbjct: 75 LIYLAD 80
>SPCC1183.02 |||glutathione S-transferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 220
Score = 30.7 bits (66), Expect = 0.18
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Frame = +1
Query: 208 VDIVKT-GKQLTEEYRAINPAQKVPA-LEIDGVTLVESMAIIQYI-EDTRPEPK--LMPD 372
VD+V+T + + + A P QK+P + DG L E +AI++Y E + K L P
Sbjct: 29 VDLVETYPHKFSADLAAKFPLQKLPVFIGADGFELSEVIAIVKYFYEKGKHNDKEGLGPV 88
Query: 373 TALQRARMREICETIVSGIQPLQNF----GL-KKHLGTEEKFLSFTKYWTERGLQTLNDL 537
++ A M + I I QN G+ + ++ EEK + L+ N+L
Sbjct: 89 NEVEEAEMLKWMCFINFDIVTPQNVRPWVGMFRGNIPYEEKPFKESATRAIDSLKIPNEL 148
Query: 538 LAKTSGAYCIGDQITLADI 594
+ + Y +GD+ TLAD+
Sbjct: 149 VKDRT--YLVGDRFTLADL 165
>SPBC16D10.01c ||SPBC418.03c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 532 DLLAKTSGAYCIGDQITLADICLVP 606
DL K GAYC ++ + D+C+ P
Sbjct: 117 DLKKKIQGAYCSIAELFMTDLCMQP 141
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 319 AIIQYIEDTRPEPKLMPDTALQRARMREICETIVSGIQPLQNFGLKKHLGTEE 477
++ +Y + + L+P + IC I SG+ L N G+ H T E
Sbjct: 460 SVFEYKDPSTKLSALIPKYFFSELNIASICYEISSGLAFLHNSGIAHHNLTTE 512
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 315 YGDNTVHRRYET*TETHARHSTTTRPYERNMR 410
+G + H Y T H RHSTT +R+ R
Sbjct: 149 HGSHRRHEPYRTHLSRHHRHSTTNYHSKRDDR 180
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 433 PLQNFGLKKHLGTEEKFLSFTKYWTERGLQTLNDLLAKTSG 555
PL L HLGT +++ S ERG+ + DL T G
Sbjct: 145 PLDYTILDHHLGTIDQWRSTITAMHERGMYLVVDLTVATLG 185
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 314 DSTKVTPSISRAGTFCAGLMALYSSVSCL 228
+S K+ +IS G+F A L YSS S +
Sbjct: 31 ESLKLKSNISHTGSFFANLSQSYSSTSII 59
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 321 DNTVHRRYET*TETHARHSTTTRPYER-NMRDYCIRY 428
+N HR Y++ + TH + T Y R + D C+ +
Sbjct: 621 NNLFHRAYKSSSRTHLANRYFTADYARLQINDMCVSW 657
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,645,374
Number of Sequences: 5004
Number of extensions: 55749
Number of successful extensions: 158
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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