Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m24r
(783 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31708| Best HMM Match : GTP_CDC (HMM E-Value=0) 194 9e-50
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 136 2e-32
SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09) 54 1e-07
SB_31902| Best HMM Match : GTP_CDC (HMM E-Value=0.48) 50 3e-06
SB_12556| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_6159| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_2290| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42) 33 0.20
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 33 0.26
SB_593| Best HMM Match : TrmB (HMM E-Value=0.0047) 32 0.60
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 31 1.1
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 31 1.1
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 30 1.8
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_39220| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) 29 5.6
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08) 28 9.8
>SB_31708| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 272
Score = 194 bits (472), Expect = 9e-50
Identities = 84/138 (60%), Positives = 111/138 (80%)
Frame = -2
Query: 782 EMMERLHRKVNIVVVIAKADSLTAIEIKRLKARILNDLEEHQIQVYQFPECDSDEDEDFK 603
E M+ LH KVNIV VIAK+DSLT EI RLK ++L+++ +H+I++Y FPECDS++DE+F
Sbjct: 124 EFMKALHTKVNIVPVIAKSDSLTKTEISRLKRKVLDEIADHEIKIYSFPECDSEDDEEFL 183
Query: 602 QQDRELKEAAPFAVVASDIVLEMGGKRVRGRQYPWGIVDVENPRHSDFTKLRTMLISTHM 423
+++LK + PFAV+ S+ V+E+ G++VR R YPWG +VENP H DF KLR ML+ THM
Sbjct: 184 AINKDLKASLPFAVIGSNTVIEVKGRKVRARWYPWGYAEVENPDHCDFIKLRNMLVRTHM 243
Query: 422 QDLKDVTQDVHYENFRAQ 369
QDLKDVTQDVHYEN+RAQ
Sbjct: 244 QDLKDVTQDVHYENYRAQ 261
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 136 bits (328), Expect = 2e-32
Identities = 71/187 (37%), Positives = 115/187 (61%), Gaps = 8/187 (4%)
Frame = -2
Query: 704 IKRLKARILNDLEEHQIQVYQFPECDSDEDEDFKQQDRELKEAAPFAVVASDIVLEMGGK 525
+K+L +IL +++E+ I +Y+FP+ +ED + + +++ PFAVV S+ VLE+ GK
Sbjct: 155 MKKLHNKILQEIKENNISIYEFPDLGGEEDAELDAVN--MRDKVPFAVVGSNTVLEVNGK 212
Query: 524 RVRGRQYPWGIVDVENPRHSDFTKLRTMLISTHMQDLKDVTQDVHYENFRAQCISQI--- 354
RVR R YPWG+V+VEN H DF LR MLI THMQDLKDVT D HYEN+R ++ +
Sbjct: 213 RVRARVYPWGVVEVENVEHCDFVALRNMLIRTHMQDLKDVTNDAHYENYRCDKLASMTVG 272
Query: 353 SQHAMRERGKLKRDSMGNNNDVVITDTDRLLLQKDEEIRRMQDM-LTQMQQKLKASD--- 186
S + L + + + D ++ L + ++E+ ++ D+ + + ++KLK S+
Sbjct: 273 SPSSSPSHVSLSKSPL-EQLEAEKDDHEKKLKKMEQEMEQVFDIKVKEKKKKLKDSEAEL 331
Query: 185 -KKHDSI 168
KKH+ +
Sbjct: 332 GKKHEQM 338
>SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09)
Length = 337
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/50 (42%), Positives = 39/50 (78%)
Frame = -2
Query: 776 MERLHRKVNIVVVIAKADSLTAIEIKRLKARILNDLEEHQIQVYQFPECD 627
M++L +KVNI+ +IAKAD++ E+K+ K +I+++LE + +++Y+FP D
Sbjct: 30 MKQLDKKVNIIPIIAKADTIAKSELKQFKQKIMDELESNGVEIYRFPVDD 79
>SB_31902| Best HMM Match : GTP_CDC (HMM E-Value=0.48)
Length = 154
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = -2
Query: 674 DLEEHQIQVYQFPECDSDEDEDFKQQDRELKEAAPFAVVASDIVLEMGGKRVRGRQYPWG 495
D++ H I +Y + ++E+ + R ++E PFAVV SD + + GK V GR+ WG
Sbjct: 4 DIQAHNINIYPMMDRHDLDEEELRVNSR-IREQLPFAVVGSDSYVTVSGKSVLGRKTKWG 62
Query: 494 IVD 486
+++
Sbjct: 63 VIE 65
>SB_12556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -2
Query: 431 THMQDLKDVTQDVHYENFRAQCISQ--ISQHAMRERGKLKRDSMGNNNDVVITDTDRLLL 258
THMQDLK+VTQDVHYENFRA + + + + R + + + I + +R L
Sbjct: 2 THMQDLKEVTQDVHYENFRAMRLGEAAVPREPGTPRSAKSLTRAKDASSLEIMEKERALQ 61
Query: 257 QKDEEI 240
+K+ E+
Sbjct: 62 EKEAEV 67
>SB_6159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -2
Query: 431 THMQDLKDVTQDVHYENFRAQ 369
THMQDLKDVTQDVHYEN+RAQ
Sbjct: 2 THMQDLKDVTQDVHYENYRAQ 22
>SB_2290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -2
Query: 782 EMMERLHRKVNIVVVIAKADSLTAIEIKRLKAR 684
E M+ LH VNIV VI KAD+LT E+K +K R
Sbjct: 8 EFMKALHHIVNIVPVIGKADTLTPTELKEMKRR 40
>SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42)
Length = 275
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -2
Query: 782 EMMERLHRKVNIVVVIAKADSLTAIEIKRLKAR 684
E M+RL + VNIV VIAKAD++T E + + R
Sbjct: 243 EFMKRLDKCVNIVPVIAKADNMTLEEREAFRRR 275
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 33.1 bits (72), Expect = 0.26
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Frame = -2
Query: 527 KRVRGRQYPWGIVDVENPRHSDFTKLRTMLISTHMQDLKDVTQDVHYENFRAQCISQISQ 348
K R Y V++E + TK T++ Q++KD T D + + +I +
Sbjct: 3462 KHTEIRVYEEKYVEIEKRYYELETKYYTVI-----QEMKDATVDNDITKDELERLKKIVE 3516
Query: 347 HAMRERGKLKRDSMGNNNDVVITDTDRLLLQKD-----EEIRRMQDMLTQMQQKLKASDK 183
+ +E+ LKR G+++D + +R LQ+D EI R++ + +++ + + K
Sbjct: 3517 NDEKEKENLKRKLQGSDSDGTM---ERKRLQRDMSDARAEISRLEKEVKRLKDDQELARK 3573
Query: 182 KHDSIID 162
+ +I+
Sbjct: 3574 QRQEVIE 3580
>SB_593| Best HMM Match : TrmB (HMM E-Value=0.0047)
Length = 168
Score = 31.9 bits (69), Expect = 0.60
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 386 ENFRAQC-ISQISQHAMRERGKLKRDSMGNNNDVVITDTDRLLLQKDEEIRRMQDMLTQM 210
E F+A+ I +++ + ER K + D M D ++D D +KDEE++ DM++Q+
Sbjct: 81 EFFKAEKDIWKVAMRIISERKKRELDPMVAVLDK-LSDIDED--KKDEEVKAFTDMVSQL 137
Query: 209 QQKLKASDK 183
Q+ K +DK
Sbjct: 138 QKFTKQADK 146
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 31.1 bits (67), Expect = 1.1
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Frame = -2
Query: 635 ECDSDEDEDFKQQDRELKEAAPFAVVASDIVLEMGGKRVRGRQYPWGIVDVENPRHSDFT 456
E + E+E + L AAP A+V D+V + RG G+ D S
Sbjct: 1154 EISAVEEEIVMTAESNLGAAAPDAMVIMDVV-----ENSRGEDVNEGLQDRLKDLESQLE 1208
Query: 455 KLRTMLISTHMQDLKDVTQDVHYENFRAQCI--SQISQHAMRERGKLKRDSMGNNNDVVI 282
+ + L + + +D++D+ D+ R ++ ++ +RE ++K+++ V
Sbjct: 1209 E-QKKLNANYQKDIEDLLNDIVKLKMRGMDDDGTEEMENQIREELEVKQENKLLQEQVEN 1267
Query: 281 TDTDRLLLQKDE------------EIRRMQDMLTQMQQKLK 195
D LLQKD EI+R++++++ +Q++L+
Sbjct: 1268 LIKDNALLQKDNTDKSTEIQNMELEIKRLENIVSDLQKELE 1308
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 499 HGYCLPRTLLPPISRTISEATTANGA 576
H + L +TL+PP S T+SEA+TA+ A
Sbjct: 38 HRFHLGKTLVPPQSPTVSEASTADTA 63
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 474 WIFNINNPPRILSTPHSFAS 533
W I++PPR LS+P SFAS
Sbjct: 642 WSIGISSPPRRLSSPQSFAS 661
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = -2
Query: 710 IEIKRLKARILNDLEEHQIQVYQFPECDSDEDEDFKQQDRELKEAAPFAVVASDIVLEMG 531
IEI++LKA+ L L+ + Q++ + EDE+ +Q++R+ AA + MG
Sbjct: 62 IEIEKLKAK-LESLKNEKHQMFLQLKKVLSEDEEKRQRERQAALAAMPVMAPRPFHAVMG 120
Query: 530 GKRVRG 513
G R G
Sbjct: 121 GPRPFG 126
>SB_39220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -2
Query: 731 KADSLTAIEIKRLKARILNDLEEHQIQVYQFPECDSDEDEDFKQQDRELKEAAPFAVVAS 552
K++S E+ + + L+ H +Q F E +DED ++ L PFA++A
Sbjct: 225 KSESRRQREVDEEVSELRMRLKPHSLQPRDFMESADGDDEDETAEEGGLVSNNPFALLAD 284
Query: 551 D 549
+
Sbjct: 285 E 285
>SB_12321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 656 IQVYQFPECDSDEDEDFKQQDRELKEAAP 570
++ Y+ P+ DSDED+ KQ + K AP
Sbjct: 91 VKAYRRPKDDSDEDKKSKQPPKPKKSEAP 119
>SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027)
Length = 674
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = -2
Query: 491 VDVENPRHSDFTKLRTMLISTHMQDLKDVTQDVHYENFRAQCISQISQHAMRERGKLKRD 312
V EN + KL+ I + ++++ + + +N + I + Q ++ +L D
Sbjct: 424 VQKENEKSETILKLKAD-IQAKDEQIEELERQLKEQNKKLTTIKRNQQLEREKQAQLLND 482
Query: 311 --SMGNNNDVVITDTDRLLLQKDEEIRRMQDMLTQ 213
GN +D + + + L K+E I +++ LT+
Sbjct: 483 VKKQGNEHDERVDEIRKELKTKEERIAVLEEALTE 517
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 489 NNPPRILSTPHSFASHLEDYIRSDHSKWG 575
N+PP ++ H+ H+ DY + ++ K G
Sbjct: 515 NHPPMVIPIHHTLMYHVSDYFQEEYRKEG 543
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 278 DTDRLLLQKDEEIRRMQDMLTQMQQKLKASDKKHDSI 168
D D+ L+K+E +R+Q ++ +K K +K D++
Sbjct: 1604 DRDKYQLEKEEAEKRLQSYEDELNEKQKQKEKAEDNL 1640
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = -2
Query: 311 SMGNNNDVVITDTDRLLLQKDEEIRRMQDMLTQMQQKLKASDKKHDSIID 162
++ + N V+++ + L+ Q +E + + L + ++ LKAS + DS+ D
Sbjct: 250 TLEHENSVLLSKKEELMAQIGKETAALGEQLIEKEESLKASLAEVDSLKD 299
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/94 (19%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = -2
Query: 446 TMLISTHMQDLKDVTQDVHYENFRAQCISQISQHAMRERGKLKRDSMGNNNDVVITDTDR 267
T + ++L+D+ + E + I I ++ + + R + + D +R
Sbjct: 4320 TREVMEQKKELQDIRTEHVKEAEKQAMIEGIRENGVEAAEFVIRKVLDKRQGQELKDLER 4379
Query: 266 LLLQK-----DEEIRRMQDMLTQMQQKLKASDKK 180
+ +++ DE + +M+D Q Q++L+ DK+
Sbjct: 4380 MYMEERRVAVDEALAKMEDRHAQQQEELRLQDKQ 4413
>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2671
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 350 QHAMRERGKLKRDSMGNNND 291
QH E+GKLK + GN ND
Sbjct: 1029 QHPNNEKGKLKTNEPGNQND 1048
>SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08)
Length = 1057
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = -2
Query: 437 ISTHMQDLKDVTQDVHYENFRAQCISQISQHAMRERGKLKRDSMGNNNDVVITDTDRLLL 258
I +++LK +V +E R Q S++ E KL ++ N V++T + L
Sbjct: 748 IQQSLEELKSGHTNVSFEQVR-QLKSEL------EASKLSSEAAEKEN-VILTLS---LK 796
Query: 257 QKDEEIRRMQDMLTQMQQKLK 195
QKD+EI R+ +M +QQ ++
Sbjct: 797 QKDKEIERLGEMTRGLQQSMR 817
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,804,801
Number of Sequences: 59808
Number of extensions: 432521
Number of successful extensions: 1836
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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