Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m24f
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-8|CAB63329.1|  459|Caenorhabditis elegans Hypothetical pr...    44   8e-05
AL117200-14|CAJ85779.1|  465|Caenorhabditis elegans Hypothetical...    33   0.15 
AL117200-12|CAB60583.1|  461|Caenorhabditis elegans Hypothetical...    33   0.15 
AL117200-11|CAD54172.1|  530|Caenorhabditis elegans Hypothetical...    33   0.15 
Z83116-12|CAB60294.2|  346|Caenorhabditis elegans Hypothetical p...    27   9.5  
Z81047-15|CAB02826.2|  346|Caenorhabditis elegans Hypothetical p...    27   9.5  
Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z82077-8|CAB63329.1|  459|Caenorhabditis elegans Hypothetical
           protein W09C5.2 protein.
          Length = 459

 Score = 44.0 bits (99), Expect = 8e-05
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +1

Query: 490 DYIGFATLPEQVHRKSVKRGFDFTLMVV 573
           +Y GFA  P QV R++VK GFDFTLMVV
Sbjct: 26  NYWGFANFPNQVFRRAVKNGFDFTLMVV 53


>AL117200-14|CAJ85779.1|  465|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4c protein.
          Length = 465

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 493 YIGFATLPEQVHRKSVKRGFDFTLMVV 573
           ++GF +LP Q+ +K+V+ GF F LM V
Sbjct: 79  HVGFDSLPHQLVKKAVEAGFQFNLMCV 105


>AL117200-12|CAB60583.1|  461|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4b protein.
          Length = 461

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 493 YIGFATLPEQVHRKSVKRGFDFTLMVV 573
           ++GF +LP Q+ +K+V+ GF F LM V
Sbjct: 79  HVGFDSLPHQLVKKAVEAGFQFNLMCV 105


>AL117200-11|CAD54172.1|  530|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4a protein.
          Length = 530

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 493 YIGFATLPEQVHRKSVKRGFDFTLMVV 573
           ++GF +LP Q+ +K+V+ GF F LM V
Sbjct: 148 HVGFDSLPHQLVKKAVEAGFQFNLMCV 174


>Z83116-12|CAB60294.2|  346|Caenorhabditis elegans Hypothetical
           protein C41G6.2 protein.
          Length = 346

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 379 QCNFYSVPSSRPGVASYIYNFS 314
           Q N Y++PSS   +++YIY  S
Sbjct: 197 QINVYAIPSSINSISTYIYELS 218


>Z81047-15|CAB02826.2|  346|Caenorhabditis elegans Hypothetical
           protein C41G6.2 protein.
          Length = 346

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 379 QCNFYSVPSSRPGVASYIYNFS 314
           Q N Y++PSS   +++YIY  S
Sbjct: 197 QINVYAIPSSINSISTYIYELS 218


>Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical
           protein C49F8.1 protein.
          Length = 407

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 369 FIPFLRLVRASLHTFIISRKN 307
           F+PFLRL  A +H +  SR N
Sbjct: 82  FLPFLRLHFAYIHPYFFSRNN 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,327,386
Number of Sequences: 27780
Number of extensions: 201313
Number of successful extensions: 414
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)