Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m22f
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 254 2e-67
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 254 2e-67
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 254 2e-67
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 254 2e-67
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 194 3e-49
U27193-1|AAA83151.1| 625|Homo sapiens protein-tyrosine phosphat... 29 9.9
BC045110-1|AAH45110.1| 625|Homo sapiens dual specificity phosph... 29 9.9
BC038231-1|AAH38231.1| 625|Homo sapiens dual specificity phosph... 29 9.9
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 29 9.9
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 254 bits (622), Expect = 2e-67
Identities = 114/145 (78%), Positives = 128/145 (88%)
Frame = +1
Query: 139 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 318
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDV 62
Query: 319 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 498
GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 63 GNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 122
Query: 499 RKKGAKLTEAEEAIITRREVKRQQE 573
RKKGAKLT EE I+ ++ K+ Q+
Sbjct: 123 RKKGAKLTPEEEEILNKKRSKKIQK 147
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 254 bits (622), Expect = 2e-67
Identities = 114/145 (78%), Positives = 128/145 (88%)
Frame = +1
Query: 139 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 318
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDV 62
Query: 319 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 498
GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 63 GNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 122
Query: 499 RKKGAKLTEAEEAIITRREVKRQQE 573
RKKGAKLT EE I+ ++ K+ Q+
Sbjct: 123 RKKGAKLTPEEEEILNKKRSKKIQK 147
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 254 bits (622), Expect = 2e-67
Identities = 114/145 (78%), Positives = 128/145 (88%)
Frame = +1
Query: 139 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 318
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDV 62
Query: 319 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 498
GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 63 GNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 122
Query: 499 RKKGAKLTEAEEAIITRREVKRQQE 573
RKKGAKLT EE I+ ++ K+ Q+
Sbjct: 123 RKKGAKLTPEEEEILNKKRSKKIQK 147
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 254 bits (622), Expect = 2e-67
Identities = 114/145 (78%), Positives = 128/145 (88%)
Frame = +1
Query: 139 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 318
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDV 62
Query: 319 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 498
GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 63 GNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 122
Query: 499 RKKGAKLTEAEEAIITRREVKRQQE 573
RKKGAKLT EE I+ ++ K+ Q+
Sbjct: 123 RKKGAKLTPEEEEILNKKRSKKIQK 147
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 194 bits (472), Expect = 3e-49
Identities = 97/145 (66%), Positives = 111/145 (76%)
Frame = +1
Query: 139 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 318
ISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG----------- 51
Query: 319 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 498
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 52 --------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 102
Query: 499 RKKGAKLTEAEEAIITRREVKRQQE 573
RKKGAKLT EE I+ ++ K+ Q+
Sbjct: 103 RKKGAKLTPEEEEILNKKRSKKIQK 127
>U27193-1|AAA83151.1| 625|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 625
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 243 PGVCSGTP*LILPLLAYGRTFPTGGPSLMPVIPTNTLGSQ 124
PG+C G P +LP+ P L ++P LGSQ
Sbjct: 134 PGLCEGKPAALLPMSLSQPCLPVPSVGLTRILPHLYLGSQ 173
>BC045110-1|AAH45110.1| 625|Homo sapiens dual specificity
phosphatase 8 protein.
Length = 625
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 243 PGVCSGTP*LILPLLAYGRTFPTGGPSLMPVIPTNTLGSQ 124
PG+C G P +LP+ P L ++P LGSQ
Sbjct: 134 PGLCEGKPAALLPMSLSQPCLPVPSVGLTRILPHLYLGSQ 173
>BC038231-1|AAH38231.1| 625|Homo sapiens dual specificity
phosphatase 8 protein.
Length = 625
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 243 PGVCSGTP*LILPLLAYGRTFPTGGPSLMPVIPTNTLGSQ 124
PG+C G P +LP+ P L ++P LGSQ
Sbjct: 134 PGLCEGKPAALLPMSLSQPCLPVPSVGLTRILPHLYLGSQ 173
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 29.5 bits (63), Expect = 9.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 362 RVLRVEHSDPQEKLPVSRRSARYLVFPPRERTE 264
R R E PQ+ + V RS R L PPR RT+
Sbjct: 411 RTARCELRSPQQPVSVPGRSPRALWRPPRRRTQ 443
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,750,976
Number of Sequences: 237096
Number of extensions: 1884412
Number of successful extensions: 4051
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4051
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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