Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m22f
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p pro...   217   7e-57
AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p pro...   217   7e-57
AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC...   217   7e-57
AY060597-1|AAL28145.1|  664|Drosophila melanogaster GH01406p pro...    36   0.057
AE014134-1719|ABC65887.1|  664|Drosophila melanogaster CG5899-PB...    36   0.057
AE014134-1718|ABC65886.1|  831|Drosophila melanogaster CG5899-PC...    36   0.057
AE014134-1717|AAF52824.1|  844|Drosophila melanogaster CG5899-PA...    36   0.057
BT022800-1|AAY55216.1|  323|Drosophila melanogaster IP13716p pro...    29   3.8  
BT022769-1|AAY55185.1|  538|Drosophila melanogaster IP13916p pro...    29   3.8  
AE014134-571|AAF51133.1|  528|Drosophila melanogaster CG3347-PA ...    29   3.8  
AJ297734-1|CAC11127.1|  702|Drosophila melanogaster hypothetical...    28   8.7  
AF145663-1|AAD38638.1|  702|Drosophila melanogaster BcDNA.GH1102...    28   8.7  
AF145636-1|AAD38611.1|  683|Drosophila melanogaster BcDNA.GH0718...    28   8.7  
AE014297-4283|AAF56830.1|  683|Drosophila melanogaster CG14526-P...    28   8.7  
AE014297-4282|AAF56829.1|  700|Drosophila melanogaster CG14527-P...    28   8.7  
AE014296-1369|AAF50489.3|  702|Drosophila melanogaster CG7927-PA...    28   8.7  

>AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p
           protein.
          Length = 208

 Score =  217 bits (531), Expect = 7e-57
 Identities = 101/144 (70%), Positives = 120/144 (83%), Gaps = 2/144 (1%)
 Frame = +1

Query: 139 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 318
           ISRD  HKRRATGGKR  +RKKRK+ELGRPAANT+LG  R+H VR+RGGNTK RALRL+T
Sbjct: 3   ISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLET 62

Query: 319 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 498
           GNF+W SE   RKTRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLG
Sbjct: 63  GNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLG 122

Query: 499 RKKGAKLTEAEEA--IITRREVKR 564
           RK+  K  + E+   ++T++  ++
Sbjct: 123 RKRNPKHAQKEDENDVLTKKRSEK 146


>AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p
           protein.
          Length = 208

 Score =  217 bits (531), Expect = 7e-57
 Identities = 101/144 (70%), Positives = 120/144 (83%), Gaps = 2/144 (1%)
 Frame = +1

Query: 139 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 318
           ISRD  HKRRATGGKR  +RKKRK+ELGRPAANT+LG  R+H VR+RGGNTK RALRL+T
Sbjct: 3   ISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLET 62

Query: 319 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 498
           GNF+W SE   RKTRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLG
Sbjct: 63  GNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLG 122

Query: 499 RKKGAKLTEAEEA--IITRREVKR 564
           RK+  K  + E+   ++T++  ++
Sbjct: 123 RKRNPKHAQKEDENDVLTKKRSEK 146


>AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC
           protein.
          Length = 208

 Score =  217 bits (531), Expect = 7e-57
 Identities = 101/144 (70%), Positives = 120/144 (83%), Gaps = 2/144 (1%)
 Frame = +1

Query: 139 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 318
           ISRD  HKRRATGGKR  +RKKRK+ELGRPAANT+LG  R+H VR+RGGNTK RALRL+T
Sbjct: 3   ISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLET 62

Query: 319 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLG 498
           GNF+W SE   RKTRI DVVYNASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLG
Sbjct: 63  GNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLG 122

Query: 499 RKKGAKLTEAEEA--IITRREVKR 564
           RK+  K  + E+   ++T++  ++
Sbjct: 123 RKRNPKHAQKEDENDVLTKKRSEK 146


>AY060597-1|AAL28145.1|  664|Drosophila melanogaster GH01406p
           protein.
          Length = 664

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = +1

Query: 337 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 501
           SE ST+ T    ++   +  AS  EL   KTL  K A+ ++D  PF  W +    L   R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233

Query: 502 KKGAKLTEAEEAI 540
             G  L  A+E I
Sbjct: 234 MSGDLLNYAQELI 246


>AE014134-1719|ABC65887.1|  664|Drosophila melanogaster CG5899-PB,
           isoform B protein.
          Length = 664

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = +1

Query: 337 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 501
           SE ST+ T    ++   +  AS  EL   KTL  K A+ ++D  PF  W +    L   R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233

Query: 502 KKGAKLTEAEEAI 540
             G  L  A+E I
Sbjct: 234 MSGDLLNYAQELI 246


>AE014134-1718|ABC65886.1|  831|Drosophila melanogaster CG5899-PC,
           isoform C protein.
          Length = 831

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = +1

Query: 337 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 501
           SE ST+ T    ++   +  AS  EL   KTL  K A+ ++D  PF  W +    L   R
Sbjct: 161 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 220

Query: 502 KKGAKLTEAEEAI 540
             G  L  A+E I
Sbjct: 221 MSGDLLNYAQELI 233


>AE014134-1717|AAF52824.1|  844|Drosophila melanogaster CG5899-PA,
           isoform A protein.
          Length = 844

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = +1

Query: 337 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 501
           SE ST+ T    ++   +  AS  EL   KTL  K A+ ++D  PF  W +    L   R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233

Query: 502 KKGAKLTEAEEAI 540
             G  L  A+E I
Sbjct: 234 MSGDLLNYAQELI 246


>BT022800-1|AAY55216.1|  323|Drosophila melanogaster IP13716p
           protein.
          Length = 323

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 468 PLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDT 361
           P+PE SC  Y         C    I+RCI+ N++ T
Sbjct: 261 PVPETSCQKYRKLSFTDENCEKIKIIRCIVSNMSPT 296


>BT022769-1|AAY55185.1|  538|Drosophila melanogaster IP13916p
           protein.
          Length = 538

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 468 PLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDT 361
           P+PE SC  Y         C    I+RCI+ N++ T
Sbjct: 476 PVPETSCQKYRKLSFTDENCEKIKIIRCIVSNMSPT 511


>AE014134-571|AAF51133.1|  528|Drosophila melanogaster CG3347-PA
           protein.
          Length = 528

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 468 PLPEWSCIYYNNCILDKGLCTHQFIVRCIIHNINDT 361
           P+PE SC  Y         C    I+RCI+ N++ T
Sbjct: 466 PVPETSCQKYRKLSFTDENCEKIKIIRCIVSNMSPT 501


>AJ297734-1|CAC11127.1|  702|Drosophila melanogaster hypothetical
           protein protein.
          Length = 702

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 419 RVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPPR 276
           RV  R N +L  L +   I + R+E  DP       +RS RY   PPR
Sbjct: 484 RVVWRQNEVLPWLESNVNIVLDRIESKDPLVNEYKEKRSLRYSGTPPR 531


>AF145663-1|AAD38638.1|  702|Drosophila melanogaster BcDNA.GH11023
           protein.
          Length = 702

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 419 RVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPPR 276
           RV  R N +L  L +   I + R+E  DP       +RS RY   PPR
Sbjct: 484 RVVWRQNEVLPWLESNVNIVLDRIESKDPLVNEYKEKRSLRYSGTPPR 531


>AF145636-1|AAD38611.1|  683|Drosophila melanogaster BcDNA.GH07188
           protein.
          Length = 683

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = +1

Query: 283 GNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASN--NELVRTKTLVKNAIVVVDATP 456
           GN+K       + NF    +C T++      VY+         +++ +  N  + +  T 
Sbjct: 528 GNSKDWWDEKSSSNFLKRRDCFTKQYG--RYVYDGIQLKESTAQSENIADNGGMRLAYTA 585

Query: 457 FRQWYESHYTLPLGRKKGAKLT 522
           +R+WYE+  TLP G +   K T
Sbjct: 586 YRKWYENQLTLPNGAQDMTKET 607


>AE014297-4283|AAF56830.1|  683|Drosophila melanogaster CG14526-PA
           protein.
          Length = 683

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = +1

Query: 283 GNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASN--NELVRTKTLVKNAIVVVDATP 456
           GN+K       + NF    +C T++      VY+         +++ +  N  + +  T 
Sbjct: 528 GNSKDWWDEKSSSNFLKRRDCFTKQYG--RYVYDGIQLKESTAQSENIADNGGMRLAYTA 585

Query: 457 FRQWYESHYTLPLGRKKGAKLT 522
           +R+WYE+  TLP G +   K T
Sbjct: 586 YRKWYENQLTLPNGAQDMTKET 607


>AE014297-4282|AAF56829.1|  700|Drosophila melanogaster CG14527-PA
           protein.
          Length = 700

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = +1

Query: 283 GNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASN--NELVRTKTLVKNAIVVVDATP 456
           GN+K       + NF    +C T++      VY+         +++ +  N  + +  T 
Sbjct: 545 GNSKDWWDEKSSSNFLKRRDCFTKQYG--RYVYDGIQLKESTAQSENIADNGGMRLAYTA 602

Query: 457 FRQWYESHYTLPLGRKKGAKLT 522
           +R+WYE+  TLP G +   K T
Sbjct: 603 YRKWYENQLTLPNGAQDMTKET 624


>AE014296-1369|AAF50489.3|  702|Drosophila melanogaster CG7927-PA
           protein.
          Length = 702

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 419 RVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVFPPR 276
           RV  R N +L  L +   I + R+E  DP       +RS RY   PPR
Sbjct: 484 RVVWRQNEVLPWLESNVNIVLDRIESKDPLVNEYKEKRSLRYSGTPPR 531


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,418,805
Number of Sequences: 53049
Number of extensions: 567051
Number of successful extensions: 1459
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)