Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m21r
(794 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 39 0.003
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 39 0.004
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 35 0.054
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 35 0.054
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 34 0.095
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 33 0.17
At1g79890.1 68414.m09334 helicase-related similar to CHL1 potent... 33 0.22
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 32 0.38
At5g59590.1 68418.m07467 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.88
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 31 0.88
At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to vil... 30 1.5
At5g04590.1 68418.m00458 sulfite reductase / ferredoxin (SIR) id... 30 2.0
At5g03390.1 68418.m00292 expressed protein contains Pfam profile... 30 2.0
At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family pr... 30 2.0
At4g14630.1 68417.m02251 germin-like protein (GLP9) identical to... 30 2.0
At1g75460.1 68414.m08765 ATP-dependent protease La (LON) domain-... 29 3.6
At1g26110.1 68414.m03186 expressed protein 29 4.7
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 28 8.2
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 39.1 bits (87), Expect = 0.003
Identities = 38/155 (24%), Positives = 60/155 (38%)
Frame = -2
Query: 667 NADAAVTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEG 488
+ D+ V W+ +G P++K VL +G W L AD P H GP + +G
Sbjct: 125 SGDSGVKDWIDAGLPAEKAVLGFPYYGWAWTL-AD------PKNHGYYVDTTGPAISDDG 177
Query: 487 LLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTA 308
+SY ++ +++ K H V G Y + G W+ Y+ ++
Sbjct: 178 EISYSQLKTWIVD---NKATTVHDNIV------IGDYCY-------AGTTWIGYDSEESI 221
Query: 307 GQKAAYVKSKNLGGVAIVDLSLDDFRGLCTGDKYP 203
K Y K K L G + DD L + P
Sbjct: 222 VTKVIYAKQKGLLGYFSWQVGGDDKSELSSAGSSP 256
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 791 IXNLVDYVNVGAYDYYTP 738
I L+D+VN+ AYD+Y P
Sbjct: 88 ISELLDWVNIKAYDFYGP 105
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 38.7 bits (86), Expect = 0.004
Identities = 39/161 (24%), Positives = 63/161 (39%)
Frame = -2
Query: 685 IATPLQNADAAVTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGP 506
+ T ++ D+ V W +G P++K VL +G W L AD ++ G T GP
Sbjct: 206 LPTDGRSGDSGVRDWTEAGLPAKKAVLGFPYYGWAWTL-ADPDVNGYDANTT------GP 258
Query: 505 YVKTEGLLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSY 326
+ +G +SY ++ +++ KV D G Y + G W+ Y
Sbjct: 259 AISDDGEISYRQLQTWIVDNG--------ATKVHD-DMMVGDYCY-------AGTTWIGY 302
Query: 325 EDPDTAGQKAAYVKSKNLGGVAIVDLSLDDFRGLCTGDKYP 203
+ + K Y K K L G + DD L + P
Sbjct: 303 DSEKSIVTKVIYAKQKGLLGYFSWHVGGDDNSELSSAGSTP 343
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 794 AIXNLVDYVNVGAYDYYTP 738
AI N +D++N+ AYD+Y P
Sbjct: 174 AISNSLDWINLMAYDFYGP 192
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 35.1 bits (77), Expect = 0.054
Identities = 37/146 (25%), Positives = 62/146 (42%)
Frame = -2
Query: 703 LFTPHKIATPLQNADAAVTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDG 524
LF P A ++ D+ ++ WL + P++K VL + G W L+ D+E G TDG
Sbjct: 213 LFDPSNPAG--RSGDSGLSKWLEAKLPAKKAVLGFSYCGWAWTLE-DAENNGYDAA-TDG 268
Query: 523 PGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEG 344
+ ++G ++Y ++ +I+ DP+ G Y + G
Sbjct: 269 AA-----ISSDGSITYAKIRNYIIDNG--------AATFHDPAV-IGFYCY-------VG 307
Query: 343 GIWVSYEDPDTAGQKAAYVKSKNLGG 266
W+ Y+D + K Y K K L G
Sbjct: 308 TTWIGYDDNQSIVSKVRYAKLKGLLG 333
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 35.1 bits (77), Expect = 0.054
Identities = 32/123 (26%), Positives = 49/123 (39%)
Frame = -2
Query: 667 NADAAVTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEG 488
+ D+ + W+ G P +K VL + G W L D + G G ++ V +G
Sbjct: 227 SGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKD-TGYNAA-AAGVAKSEDDVSEDG 284
Query: 487 LLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTA 308
++Y ++ K I + KV DP K G Y F IW+ YED +
Sbjct: 285 SINYAQI-NKFIRDEE-------AAKVYDP-KVVGHYCFAKK-------IWIGYEDTQSV 328
Query: 307 GQK 299
K
Sbjct: 329 EAK 331
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 779 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQN 684
+D+VN+ AYD+Y P ++K TA ++ N
Sbjct: 191 LDWVNIIAYDFYGPVSSSKFTVPTAGLHVSSN 222
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 34.3 bits (75), Expect = 0.095
Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 1/149 (0%)
Frame = -2
Query: 667 NADAAVTYWLTSGAPSQKIVLSIATFGRTWKL-DADSEIAGVPPIHTDGPGEAGPYVKTE 491
+ DA W+ +G P++K VL +G W+L +A+S H+ G + +
Sbjct: 234 SGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANS--------HSYYAPTTGAAISPD 285
Query: 490 GLLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDT 311
G + Y ++ K I N S G Y + G W+ Y+D +
Sbjct: 286 GSIGYGQI-RKFIVDNG--------ATTVYNSTVVGDYCY-------AGTNWIGYDDNQS 329
Query: 310 AGQKAAYVKSKNLGGVAIVDLSLDDFRGL 224
K Y K + L G + DD GL
Sbjct: 330 IVTKVRYAKQRGLLGYFSWHVGADDNSGL 358
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 794 AIXNLVDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPTAERRRRCHILA 639
A+ + +D+VN+ AYD+Y P ++ A ++ P N P+ + R I A
Sbjct: 195 AVASSLDWVNLMAYDFYGPGW-SRVTGPPAALFDPSNAGPSGDAGTRSWIQA 245
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 667 NADAAVTYWLTSGAPSQKIVLSIATFGRTWKL-DADSEIAGVPPIHTDGPGEAGPYVKTE 491
+ DA V W +G P++K VL +G W L DA + H +GP + +
Sbjct: 232 SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCLTDAKN--------HNYYANSSGPAISPD 283
Query: 490 GLLSYPEV 467
G + Y ++
Sbjct: 284 GSIGYDQI 291
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = -1
Query: 794 AIXNLVDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPTAE 666
A+ + +D+VN+ AYD+Y + +++ AP+Y P P+ +
Sbjct: 193 AVADSLDWVNLVAYDFY-ESGSSRVTCSPAPLYDPITTGPSGD 234
>At1g79890.1 68414.m09334 helicase-related similar to CHL1 potential
helicase protein (GI:2632247) [Homo sapiens]; similar to
helicase GB:AAB06962 [Homo sapiens]
Length = 882
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = -2
Query: 505 YVKTEGLLSYPEVCGKLINPNQQKGMRPH--LRKVTDPSKRFGTYAFRLPDDNGEGGIWV 332
Y+K ++ G+ + QK H + K+T + F L ++NG+G I +
Sbjct: 466 YIKESNIIHKVSGYGERVAAMLQKDPVAHEEMSKLTS-FRAFSDMLVALTNNNGDGRIII 524
Query: 331 SYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 236
S T+GQ Y+K L G + +D+
Sbjct: 525 SRTSSSTSGQHGGYIKYVMLTGAKLFSEVVDE 556
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 661 DAAVTYWLTSGAPSQKIVLSIATFGRTWKLDADSE 557
D + +WL +G P +K V G +W LD D +
Sbjct: 204 DTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238
>At5g59590.1 68418.m07467 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 449
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 297 LLTSSQRISVVSLLWTYHWMTSAVSVPETSIQSLGPLNTVSKI 169
+LT S R+S +H++T S+ E+ +Q+LGP V K+
Sbjct: 42 VLTQSNRVSSSKDFSDFHFLTIPGSLTESDLQNLGPQKFVLKL 84
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 703 LFTPHKIATPLQNADAAVTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIA 551
LF P P D + W+ +G P++K VL G TW L + ++ A
Sbjct: 212 LFDPSNPKGPC--GDYGLKEWIKAGLPAKKAVLGFPYVGWTWSLGSGNDAA 260
>At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to villin
2 (VLN2) [Arabidopsis thaliana] GI:3415115
Length = 976
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 186 LAALRIGYLSPVQRPRKSSNDR-STIATPPRFFDLT*AAFWPAVSGSSYDTQMPPSPLSS 362
LAAL + S RP SS DR + PR AA A + SS T+ PP P
Sbjct: 761 LAALNSAFNSSSNRPAYSSQDRLNESHDGPRQRAEALAALSSAFNSSSSSTKSPPPPRPV 820
Query: 363 GRRKA 377
G +A
Sbjct: 821 GTSQA 825
>At5g04590.1 68418.m00458 sulfite reductase / ferredoxin (SIR)
identical to sulfite reductase [Arabidopsis thaliana]
GI:804953, GI:2584721
Length = 642
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +3
Query: 483 SKPSVLTYGPASPGPS---VWIGGTPAISLSASSFQVRPKV 596
++P + G GP+ VW+GGTP ++ A SF + KV
Sbjct: 554 ARPYMAELGLVGDGPNSYQVWLGGTPNLTQIARSFMDKVKV 594
>At5g03390.1 68418.m00292 expressed protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 373
Score = 29.9 bits (64), Expect = 2.0
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 335 PNATLTVVIRKTEGVCSETLAGVSNLPEVRTHSLLLVGVDQLTADFWVTEQTFSLNVWSS 514
P LT + V S V NLP + + + L+A +Q L V SS
Sbjct: 97 PTLYLTNIFNPCASVSSHK---VFNLPPLEDDAKARISSISLSAS--PNQQDCVLAVKSS 151
Query: 515 FAGTISVDWR--DSRNFAVSVQFPGTT----EGRDRQYYLLAWSTAREPVCDSGVGVLQW 676
+ +S+ WR DS + V FP + GRDR++YLL + E C+ + ++
Sbjct: 152 SSPFLSL-WRPGDSAWTRIKVPFPASNVMMYSGRDRKFYLLPRESKEE--CEGPIDLINT 208
Query: 677 GCD 685
D
Sbjct: 209 SSD 211
>At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family
protein bHLH protein, Arabidopsis thaliana,
PATCHX:E255557
Length = 589
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 388 FGTYAFRLPDDNGEG--GIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDDFRGLCTG 215
FG++AF L D GE G+W+S + +G AA V + N G + + LC G
Sbjct: 259 FGSWAFNLNPDQGENDPGLWISEPNGVDSGLVAAPVMN-NGGNDSTSNSDSQPISKLCNG 317
>At4g14630.1 68417.m02251 germin-like protein (GLP9) identical to
germin-like protein subfamily 1 member 8 [SP|Q9LEA7]
Length = 222
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 537 IGGTPAISLSASSFQVRPKVAIDNTIF 617
+GGTPA++++A S Q + I NTIF
Sbjct: 167 LGGTPAVAIAALSSQNAGVITIANTIF 193
>At1g75460.1 68414.m08765 ATP-dependent protease La (LON)
domain-containing protein weak similarity to SP|P36774
ATP-dependent protease La 2 (EC 3.4.21.53) {Myxococcus
xanthus}; contains Pfam profile PF02190: ATP-dependent
protease La (LON) domain
Length = 278
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 704 PIYTPQNRNPTAERRRRCHILAHERCSKPKDSIVYRDLRS 585
P ++ ++ +PT + RRRC + + RCS S + + +S
Sbjct: 24 PFHSLRSLSPTVDNRRRCKLNSSFRCSSSSFSEKHHNAKS 63
>At1g26110.1 68414.m03186 expressed protein
Length = 611
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 483 SKPSVLTYGPASPGPSVWIGGTPAISLSASSFQVRPK 593
+KPSV+T GP SP + + P +S+S Q +PK
Sbjct: 327 NKPSVVT-GPISPPQTTPLTSAPVAGVSSSISQDKPK 362
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 794 AIXNLVDYVNVGAYDYYTPTRNNKEADYTAPIYTPQN 684
AI + +D+VN+ AYD+Y P + A + P N
Sbjct: 191 AIADNLDFVNIMAYDFYGPGWSPVTGPPAALFHDPSN 227
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,526,282
Number of Sequences: 28952
Number of extensions: 406384
Number of successful extensions: 1280
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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