Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m18r
         (776 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0C8K7 Cluster: Chromosome undetermined scaffold_158, w...    33   6.0  
UniRef50_Q8IKC0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_A0C8K7 Cluster: Chromosome undetermined scaffold_158,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_158,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 622

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 20/56 (35%), Positives = 31/56 (55%)
 Frame = -2

Query: 418 VTSLCHLLVLRLQIKRTFIKRYIFL*LCEHLPTANTWFHRSSEPIRTYLKYRNIIV 251
           +T +C+    R  I  TF K+YIF  L EH P+ N W + + + I +  +  NI+V
Sbjct: 69  ITKICYHS--RGYISETFTKQYIFAMLMEH-PSYNLWEYLNRQKILSQNQIINIVV 121


>UniRef50_Q8IKC0 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1313

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +3

Query: 9    NFNTRIL--SYYYYHRKT*G*LNNVNNTFANF*ESEGKIINV*KLRILSEVPVKNINYWN 182
            N NT IL    + Y +KT     N+ N   NF + + K IN+ K ++ +E+ +     WN
Sbjct: 969  NHNTDILFDGIFTYGKKT----QNIINDIINFYKIKNKDINILKFKVDAELQLNEKCIWN 1024

Query: 183  SFKLN 197
            S  LN
Sbjct: 1025 SSTLN 1029


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,408,570
Number of Sequences: 1657284
Number of extensions: 11859479
Number of successful extensions: 20871
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20867
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)