Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m18f
(640 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0042 + 295608-296222,298479-298925 202 2e-52
06_01_0033 - 346273-347355 197 5e-51
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 53 2e-07
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 53 2e-07
04_04_0724 + 27578337-27578371,27578492-27578607,27578717-275788... 42 3e-04
04_04_0672 + 27164628-27164792,27164903-27164965,27165298-271654... 37 0.012
05_07_0163 - 28094574-28094726,28095248-28095382,28095771-280959... 36 0.036
08_01_0567 - 5040389-5040631,5042124-5042264 34 0.083
03_05_0267 - 22538631-22539452 31 0.77
03_01_0012 - 101584-101898,102274-102531,102932-103474 31 1.0
02_05_1331 + 35736543-35736638,35737407-35737525,35737670-357377... 31 1.0
06_03_0420 + 20593468-20593719,20594534-20594581,20595155-20595970 30 1.3
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 29 2.4
03_06_0345 - 33281126-33281783,33281872-33282063,33282175-332822... 29 3.1
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 29 3.1
10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078... 29 4.1
07_03_1721 - 29023979-29025295 29 4.1
05_05_0252 - 23621592-23621912,23621958-23622317,23622979-236230... 28 5.4
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 28 5.4
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731... 28 7.2
09_02_0071 - 3877231-3877807,3880716-3880722,3880723-3881000,388... 28 7.2
07_03_1750 - 29207692-29208225 28 7.2
07_01_0743 + 5678086-5678098,5678436-5678560,5678666-5678800,567... 28 7.2
06_01_0599 - 4327671-4330034 28 7.2
02_05_1008 - 33461225-33462334 28 7.2
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921... 27 9.5
12_02_0063 + 13098519-13099585,13099759-13099906 27 9.5
12_01_0632 + 5239070-5239336 27 9.5
10_08_0498 - 18342517-18342960,18343164-18343397,18343569-183437... 27 9.5
07_01_0917 + 7735696-7735896,7735907-7736404,7736481-7736813,773... 27 9.5
07_01_0088 + 684471-685154,685271-685834,685938-686222 27 9.5
07_01_0086 + 672173-673603 27 9.5
03_02_0885 - 12169913-12170497,12170593-12170943 27 9.5
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 202 bits (492), Expect = 2e-52
Identities = 88/171 (51%), Positives = 130/171 (76%)
Frame = +1
Query: 127 SKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKIQSS 306
+K++++G G VGMA A ++LT+++ + IALVD + DKL+GEM+DLQH +AF+ ++ S
Sbjct: 40 TKISVIGAGNVGMAIAQTILTRDMADEIALVDAVPDKLRGEMLDLQHAAAFLPRVRLVSD 99
Query: 307 TDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPV 486
TD ++T GS + +VTAG RQ GESRL+L+QRN + ++I+P L ++SP+ +L+I SNPV
Sbjct: 100 TDLAVTRGSDLAIVTAGARQIPGESRLNLLQRNVALFRKIVPALAEHSPEALLLIVSNPV 159
Query: 487 DILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYIIG 639
D+LTYV WK+SG P RVIGSGTNLDS+RFR+LL++ L + Y++G
Sbjct: 160 DVLTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAEHLQVNAQDVQAYMVG 210
>06_01_0033 - 346273-347355
Length = 360
Score = 197 bits (481), Expect = 5e-51
Identities = 86/170 (50%), Positives = 127/170 (74%)
Frame = +1
Query: 130 KVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKIQSST 309
K++++G G VGMA A ++LTQ++ + I L+D +ADK++GEM+DLQH +AF+ I S T
Sbjct: 40 KISVIGAGNVGMAIAQTILTQDLADEIVLIDAVADKVRGEMLDLQHAAAFLPRVNIVSGT 99
Query: 310 DYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPVD 489
+ S+T S + +VTAG RQ GE+RL+L+QRN + ++I+P + SP+++LVI SNPVD
Sbjct: 100 EVSLTRSSDLVIVTAGARQIPGETRLNLLQRNVSLFRKIVPAAAEASPESVLVIVSNPVD 159
Query: 490 ILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYIIG 639
+LTYV WK+SG P RVIGSGTNLDS+RFR+LL++ L ++ Y++G
Sbjct: 160 VLTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAEHLEVSAQDVQAYMVG 209
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Frame = +1
Query: 130 KVTIVGV-GQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQH-GSAFMRNAKIQS 303
KV I+G G +G A M + ++++L D+ G D+ H S + +
Sbjct: 28 KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIAGTP--GVAADVSHINSPALVKGFVGE 85
Query: 304 STDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNP 483
GS + ++ AGV ++ G +R DL N ++K + + KY P+ ++ + SNP
Sbjct: 86 EQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCTAISKYCPNALVNMISNP 145
Query: 484 VDILTYV---TWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYIIG 639
V+ + +K +G + + T LD R + + + + T + ++G
Sbjct: 146 VNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTEVNVPVVG 200
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Frame = +1
Query: 130 KVTIVGV-GQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKIQSS 306
KV I+G G +G + M + ++++L D+ G D+ H +A +
Sbjct: 29 KVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTP--GVAADVSHINAPAQVKGFMGD 86
Query: 307 TDYS-ITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNP 483
GS I ++ AGV ++ G +R DL N ++K + + KY P+ ++ + SNP
Sbjct: 87 DQLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPNALVNMISNP 146
Query: 484 VDILTYV---TWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYIIG 639
V+ + +K +G + + T LD R + + + + T + ++G
Sbjct: 147 VNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTDVNVPVVG 201
>04_04_0724 +
27578337-27578371,27578492-27578607,27578717-27578875,
27578954-27579129,27580406-27580683,27580759-27580894,
27580984-27581095,27581177-27581268
Length = 367
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Frame = +1
Query: 142 VGVGQVGMAAAFSMLTQNVTNNIALVDM--MADKLKGEMMDLQHGSAFMRNAKIQSSTDY 315
+G V M A ML + + L+D+ A+ L G M+L + + + +S +
Sbjct: 53 IGYAIVAMIARGLMLGADQPVVLHLLDLPVAANALNGVRMELIDAALPLLRGVVATSDEA 112
Query: 316 SITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKY-SPDTILVIASNPVDI 492
G + +V G +R+G R DL+ +N + K L ++ +P+ +++ +NP +
Sbjct: 113 EAFKGVNVAIVIGGWPRRDGMERKDLISKNVTIYKSQASALHQHAAPNCKVLVVANPANT 172
Query: 493 LTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGI 606
V + + + I T LD R ++++L +
Sbjct: 173 NALVLKEFAPAIPAKNITCLTRLDHNRALGQVAEKLNV 210
>04_04_0672 +
27164628-27164792,27164903-27164965,27165298-27165408,
27165454-27165537,27166081-27166194,27166901-27167494,
27167604-27167675,27167761-27167997
Length = 479
Score = 37.1 bits (82), Expect = 0.012
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 66 QDGVPEEAVPARAREGGRNLEQGDHCRGRSGWDGRSFLYADAECYE*--HRSSRHDG*QI 239
+D P PAR E GR GD R RS W + E E HR+SR DG Q
Sbjct: 27 EDDAPRRHRPAREEEEGR----GDE-RSRSTWAEVVSDHKGGEAEERPDHRNSRRDGRQ- 80
Query: 240 ERRDDGPAARISIHEERQ 293
ERR+DG R+ ++ Q
Sbjct: 81 ERREDGDWERVDGRKQHQ 98
>05_07_0163 -
28094574-28094726,28095248-28095382,28095771-28095923,
28096010-28096208,28096312-28096349,28096849-28097020,
28097666-28097788,28097869-28098284
Length = 462
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = -1
Query: 172 LRPSQPDRPRQWS----PCSKFRPPSRARAGTASSGTPSCGSVSVPWDWSR 32
L PS P RPR S C+ R PS + + S PS + + PW W R
Sbjct: 13 LSPSPPPRPRHHSIKHLACAASRSPSPGPSSSRSLALPSPSASASPWPWPR 63
>08_01_0567 - 5040389-5040631,5042124-5042264
Length = 127
Score = 34.3 bits (75), Expect = 0.083
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = +1
Query: 379 SRLDLVQRN--TDVLKQIIPQLIKYSPDTILVIASNPV--DILTYV 504
++L+L++ N +L +I+P L + SP+ LV+ S+P D+LTYV
Sbjct: 3 TKLELMRSNYLKKLLTEIVPALAENSPEAALVVVSDPPVDDVLTYV 48
>03_05_0267 - 22538631-22539452
Length = 273
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -1
Query: 169 RPSQPDRPRQWSPCSKFRPPSRARAGTASSGTPS 68
R S P RPR W PCS PP+ A + PS
Sbjct: 171 RASPPARPRWW-PCSPSSPPASPSPSPARTSPPS 203
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -2
Query: 468 HQYCVRTVLYQLRDYLFKNIGVSLHEIETRFTFALSNTSSNHADLRA 328
H R L + +F N+G + I T+ LS + HADL+A
Sbjct: 311 HYTATRDELLESAGEVFANVGSGVLRIRVNHTYPLSQAARAHADLQA 357
>02_05_1331 +
35736543-35736638,35737407-35737525,35737670-35737715,
35738117-35738172,35738452-35738547,35738844-35738961,
35739406-35739672,35740023-35740124,35740302-35740659,
35740750-35740863,35741045-35741676,35741895-35742103,
35742597-35742819,35743419-35743538,35743888-35743914,
35744281-35745045,35745431-35748511
Length = 2142
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2
Query: 459 CVRTVLYQLRDYLFKNIGVSLHEIETRFTFALSNTSSNHADLRASCY 319
CVR + +LRDY G S ++E F + N D+ SCY
Sbjct: 630 CVRALKNELRDYSANEWGDSKLKLEPEPIFIIDIIEENGEDIVQSCY 676
>06_03_0420 + 20593468-20593719,20594534-20594581,20595155-20595970
Length = 371
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -1
Query: 169 RPSQPDRPRQWSPCSKFRPPSRA--RAGTASSGTPSCGSVS 53
RP R SPCS ++P RA ASS PS GS S
Sbjct: 109 RPDPIGRSASPSPCSSYQPSPRASYNPSPASSSFPSSGSSS 149
>03_05_0327 -
23154014-23154942,23155169-23155316,23155606-23156622,
23156753-23157217,23160258-23161247
Length = 1182
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 409 DVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIGSGTNLDS 567
++LK ++P+L D L + S+ VD+L + + ++V+G GT L S
Sbjct: 444 EILKVLLPRLSDMVSDPALSVRSSAVDLLLAIR-DLRSFQFNKVVGLGTLLSS 495
>03_06_0345 -
33281126-33281783,33281872-33282063,33282175-33282217,
33282751-33282874,33282966-33283058,33284484-33284685,
33284751-33284857,33285462-33285543,33285629-33285666,
33285751-33285837,33286324-33286434,33286554-33286904
Length = 695
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 175 KLRPSQPDRPRQWSPCSKFRPPSRARAGTASSGTPSCGSVS 53
K+ P P PRQ + RPP+ A AG TP C V+
Sbjct: 50 KVPPPPPPPPRQ----ERARPPAGAAAGEEEETTPKCRVVT 86
>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
28085948-28086253,28086369-28086643,28087034-28087252,
28087486-28089015,28089236-28089397,28089512-28089666,
28090195-28091064,28091363-28091832,28091917-28091981,
28092105-28092448,28092531-28092710,28092817-28092920,
28093053-28093162,28093648-28093744,28094138-28094238,
28094324-28094476,28094561-28094674,28094795-28094884,
28094960-28095307
Length = 2157
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 112 VDETWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNA 291
+ T KV I+G G G+AAA + N + V AD++ G MM +G M+
Sbjct: 1792 LQRTGKKVAIIGSGPAGLAAADQL---NKMGHFVTVFERADRIGGLMM---YGVPNMKTD 1845
Query: 292 KIQ 300
KI+
Sbjct: 1846 KIE 1848
>10_08_0925 +
21604871-21605021,21605562-21605881,21606899-21607897,
21608085-21608126,21608190-21608249,21608915-21608959
Length = 538
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 518 LIFHVTYVRISTGLLAITNIVSGLYFISCGIICLRT 411
++F +T+V T L + I SG +F G ICL T
Sbjct: 435 VVFLMTFVIGQTFLAVLCRIKSGTFFFFAGWICLMT 470
>07_03_1721 - 29023979-29025295
Length = 438
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 496 SEYPRGYWRSPILCPDCTLSAA 431
S +P G W SP + P+C++SA+
Sbjct: 312 SPWPNGAWSSPWIQPNCSVSAS 333
>05_05_0252 -
23621592-23621912,23621958-23622317,23622979-23623059,
23623262-23623633
Length = 377
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 133 PCSKFRPPSRARAGTASSGTPSCGSVSVPWDWSR 32
P + RPP AG+A + P G++ VP WSR
Sbjct: 258 PITYVRPPRHEAAGSAPA--PEEGAIIVPAPWSR 289
>03_02_0789 +
11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 406 TDVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIG 546
TDVL ++ +++K PD LV+ S ++ + T+ SG P +V G
Sbjct: 195 TDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQTY-FSGAPLMKVPG 240
>12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,
7316430-7316625,7316727-7316953,7317177-7318134,
7320104-7321307,7321517-7321876,7321965-7323195,
7323334-7323599,7323738-7326335
Length = 2453
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Frame = +1
Query: 373 GESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIG-- 546
G L+ N +V K I ++ D + + S VD+L G+ KH V+G
Sbjct: 1708 GLDNLNFEHFNEEVCKNIHASTVRALADMVQALVSMYVDVLAKGLISRQGVYKHYVLGLL 1767
Query: 547 ---------SGTNLDSARFRYLLSDRLGIATTSCHGYI 633
N+DS + + +LS+ + + SC YI
Sbjct: 1768 ASLEGRTEARSDNIDSEKLQAVLSE-IELNYDSCKEYI 1804
>09_02_0071 - 3877231-3877807,3880716-3880722,3880723-3881000,
3881287-3883916
Length = 1163
Score = 27.9 bits (59), Expect = 7.2
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Frame = -2
Query: 543 DDAVLGQPANLPRNIRQNIHG-VTGDHQYCVRTVLY----QLRDYLFK-----NIGVSLH 394
D + +PA ++ +H + GD + + +Y +L D + K N+ V LH
Sbjct: 736 DSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLH 795
Query: 393 EIETRFTFALSNTSSNHADLRASCYRIIRTRLDLGVPHEC*SVLQVH---HLSFQFVSHH 223
+++ L S+H++ A + ++ T G P L++ H++F+F+S+
Sbjct: 796 DLDRSEKELLL---SHHSERLAVAFALLST--PPGAPIRVKKNLRICRDCHMAFKFISNI 850
Query: 222 VY*SDVIRNILRQH 181
V +IR+I R H
Sbjct: 851 VSREIIIRDINRFH 864
>07_03_1750 - 29207692-29208225
Length = 177
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -1
Query: 190 ASA*RKLRPSQPDRPRQWSPCSKFRPPSRARAGTASSGTPSCGSVSVP 47
A A R++R P P P + RPP ++A P C ++ P
Sbjct: 89 ACALRRVRLGAPPPPPAARPAPRSRPPLASKAKVLGRLVPGCRKLAFP 136
>07_01_0743 +
5678086-5678098,5678436-5678560,5678666-5678800,
5679128-5679200,5679581-5679654,5680292-5680396,
5680637-5680881,5680965-5681052,5681202-5681244,
5681319-5681475,5681648-5681776,5682012-5682084,
5682281-5682445,5682530-5682544,5682651-5682780,
5684517-5684651,5684880-5684945,5685088-5685170,
5685503-5685549,5685736-5685814,5685914-5686006
Length = 690
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 82 KKLFQPVHEKVDETWSKVTIVGVGQVGMAAAFSMLTQ 192
K LF P E KV I+G G GM+ A +L Q
Sbjct: 7 KGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQ 43
>06_01_0599 - 4327671-4330034
Length = 787
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 70 MESLKKLFQPVHEKVDETWSKVTIVGVGQVGMA-AAFSMLTQNVTNNI 210
MES +K F + EK E+W+ + I G Q G+ A ++ Q V N+
Sbjct: 364 MESARKAFDTMPEKTMESWNAM-ISGYAQNGLTEMAVALFEQMVKLNV 410
>02_05_1008 - 33461225-33462334
Length = 369
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 115 PPSRARAGTASSGTPSCGSVSVP 47
PPS A + T+SSG+ S G V P
Sbjct: 54 PPSSAPSSTSSSGSSSLGGVPTP 76
>12_02_0792 -
23191120-23191313,23191419-23191775,23192027-23192108,
23192186-23193097,23193190-23193346,23193540-23193694,
23194667-23194819,23195334-23195627,23195711-23195896,
23196062-23196662,23196868-23196992,23197101-23197197,
23197299-23197411,23198129-23198233
Length = 1176
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 477 TGDHQYCVRTVLYQLRDYLFKNIGVSLHEIETRFTFALSNTSSNHADL 334
T Q RTV QL D L KN+G+ ++ R + SN++S D+
Sbjct: 823 TSKGQTSDRTVSSQLEDLLDKNLGLGPTKVLGRSSLLSSNSASVADDI 870
>12_02_0063 + 13098519-13099585,13099759-13099906
Length = 404
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = -1
Query: 166 PSQPDRPRQWSPCSKFRPPSRARAGTASS--GTPSCGSVSVP 47
PSQ P Q P F PP+ A + T S TP G VP
Sbjct: 258 PSQHHPPFQTYPTDPFEPPAPAASVTQPSVPATPEQGPAYVP 299
>12_01_0632 + 5239070-5239336
Length = 88
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 509 GRLAGCPSTASSGPALTWTRHGSVT 583
GRL+ STAS G W R GS T
Sbjct: 18 GRLSAAGSTASGGSGGGWERRGSPT 42
>10_08_0498 - 18342517-18342960,18343164-18343397,18343569-18343781,
18344095-18344238,18344348-18344470,18345094-18345169,
18345252-18345355,18345745-18345819,18345942-18346106,
18346248-18346346,18346478-18346677,18346767-18346846,
18346922-18347049,18347936-18348048,18348580-18348672,
18349264-18349348,18350116-18350233,18350326-18350399,
18350485-18350537,18350624-18350804,18351219-18351264,
18351355-18351432,18351556-18351626,18351735-18351798,
18352064-18352071
Length = 1022
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 259 LQHGSAFMRNAKIQSSTDYSITAGSKIC--VVTAGVRQREGESR 384
L HG++++ + ++ S +DY I IC ++TA V + E + +
Sbjct: 910 LAHGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKK 953
>07_01_0917 +
7735696-7735896,7735907-7736404,7736481-7736813,
7736991-7737314,7737367-7737836,7738165-7738447,
7738527-7738640
Length = 740
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 145 RQWSPCSKFRPPSRARAGTASSGTPSCGSVSVP 47
++WS + PPS+ G S CG S+P
Sbjct: 108 QRWSRSTSSTPPSQNHLGNTHSSPDPCGMSSMP 140
>07_01_0088 + 684471-685154,685271-685834,685938-686222
Length = 510
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 124 WSKVTIVGVGQVGMAAA 174
W KV +VG G G+AAA
Sbjct: 14 WKKVCVVGAGMAGLAAA 30
>07_01_0086 + 672173-673603
Length = 476
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 109 KVDETWSKVTIVGVGQVGMAAA 174
K+ W KV +VG G G+AAA
Sbjct: 9 KLPAQWKKVCVVGGGMAGLAAA 30
>03_02_0885 - 12169913-12170497,12170593-12170943
Length = 311
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 60 EPQDGVPEEAVPARAREGGRNLEQGD 137
E ++G EEA+P+RA GR+ +G+
Sbjct: 55 ESEEGEREEALPSRAGSDGRSTARGE 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,712,301
Number of Sequences: 37544
Number of extensions: 414757
Number of successful extensions: 1417
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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