Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m18f
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical pr... 279 1e-75
U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate dehydro... 279 1e-75
L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate dehyd... 279 1e-75
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 29 2.1
AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ... 29 2.8
Z93374-9|CAC70078.1| 116|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF273796-1|AAG15144.1| 116|Caenorhabditis elegans nuclear recep... 29 3.7
Z93374-8|CAB07555.1| 359|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical p... 28 4.9
Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical pr... 28 4.9
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 28 4.9
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 28 4.9
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 28 4.9
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 28 6.5
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 28 6.5
AC006829-1|AAF60923.1| 258|Caenorhabditis elegans Hypothetical ... 28 6.5
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 27 8.6
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 27 8.6
U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical pr... 27 8.6
U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL117206-2|CAB60445.1| 303|Caenorhabditis elegans Hypothetical ... 27 8.6
AF067950-4|AAG24157.1| 351|Caenorhabditis elegans Serpentine re... 27 8.6
AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine re... 27 8.6
>Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical
protein F13D12.2 protein.
Length = 333
Score = 279 bits (684), Expect = 1e-75
Identities = 125/188 (66%), Positives = 159/188 (84%)
Frame = +1
Query: 76 SLKKLFQPVHEKVDETWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMM 255
++K++F + V+ + KVT+VGVGQVGMA A+S+L QN+ N + LVD++ADKLKGEMM
Sbjct: 4 TIKEVFAEIAAPVENSHGKVTVVGVGQVGMACAYSILQQNLANELCLVDVVADKLKGEMM 63
Query: 256 DLQHGSAFMRNAKIQSSTDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQ 435
DLQHG AF R+ +++ TDYSITAGSK+CVVTAG RQREGE+RL LVQRN ++ K IIPQ
Sbjct: 64 DLQHGLAFTRHCTVKADTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQ 123
Query: 436 LIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATT 615
L+KYSPDT +++ SNPVD+LTYVTWK+SGLP+ RV GSGTNLDSARFR+LLS++L IA +
Sbjct: 124 LVKYSPDTCILVVSNPVDVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNIAPS 183
Query: 616 SCHGYIIG 639
SCHG+IIG
Sbjct: 184 SCHGWIIG 191
>U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate
dehydrogenase protein.
Length = 333
Score = 279 bits (684), Expect = 1e-75
Identities = 125/188 (66%), Positives = 159/188 (84%)
Frame = +1
Query: 76 SLKKLFQPVHEKVDETWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMM 255
++K++F + V+ + KVT+VGVGQVGMA A+S+L QN+ N + LVD++ADKLKGEMM
Sbjct: 4 TIKEVFAEIAAPVENSHGKVTVVGVGQVGMACAYSILQQNLANELCLVDVVADKLKGEMM 63
Query: 256 DLQHGSAFMRNAKIQSSTDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQ 435
DLQHG AF R+ +++ TDYSITAGSK+CVVTAG RQREGE+RL LVQRN ++ K IIPQ
Sbjct: 64 DLQHGLAFTRHCTVKADTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQ 123
Query: 436 LIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATT 615
L+KYSPDT +++ SNPVD+LTYVTWK+SGLP+ RV GSGTNLDSARFR+LLS++L IA +
Sbjct: 124 LVKYSPDTCILVVSNPVDVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNIAPS 183
Query: 616 SCHGYIIG 639
SCHG+IIG
Sbjct: 184 SCHGWIIG 191
>L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate
dehydrogenase protein.
Length = 333
Score = 279 bits (684), Expect = 1e-75
Identities = 125/188 (66%), Positives = 159/188 (84%)
Frame = +1
Query: 76 SLKKLFQPVHEKVDETWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMM 255
++K++F + V+ + KVT+VGVGQVGMA A+S+L QN+ N + LVD++ADKLKGEMM
Sbjct: 4 TIKEVFAEIAAPVENSHGKVTVVGVGQVGMACAYSILQQNLANELCLVDVVADKLKGEMM 63
Query: 256 DLQHGSAFMRNAKIQSSTDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQ 435
DLQHG AF R+ +++ TDYSITAGSK+CVVTAG RQREGE+RL LVQRN ++ K IIPQ
Sbjct: 64 DLQHGLAFTRHCTVKADTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQ 123
Query: 436 LIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATT 615
L+KYSPDT +++ SNPVD+LTYVTWK+SGLP+ RV GSGTNLDSARFR+LLS++L IA +
Sbjct: 124 LVKYSPDTCILVVSNPVDVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNIAPS 183
Query: 616 SCHGYIIG 639
SCHG+IIG
Sbjct: 184 SCHGWIIG 191
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 29.5 bits (63), Expect = 2.1
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = -2
Query: 636 DDVAVAGRGSDTEPV-RQQVTEPCRVQVSAGPDDAVLGQPANLPRNIRQNIHGVTGDHQY 460
DD A+ D+E V ++ R + A DD+V + ++P +I +NI G T
Sbjct: 100 DDDALMYEDGDSEEVDTRRRGRGRRGRGDAADDDSVPMEEEDIPVDILENIRGRTIRDHV 159
Query: 459 CVRTVLYQLRDYLFKNIGVSLHEIETRFTFALSNTSSNHADLRAS 325
V ++ + FKN S HE + T + S AD R S
Sbjct: 160 SDEAVAKEI-ERRFKNFLRSFHEPGNKQTKYIQMIKSMAADNRES 203
>AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical
protein Y67D8A.1 protein.
Length = 1020
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -2
Query: 261 QVHHLSFQFVSHHVY*SDVIRNILRQHRESCGHPNLTDPDNGHLAPS 121
+++ LS Q HH++ S+ I IL RE H DP N HL S
Sbjct: 190 ELYALSHQEFGHHLW-SNAIYIILMLKREGLIHSGDIDPINRHLPAS 235
>Z93374-9|CAC70078.1| 116|Caenorhabditis elegans Hypothetical
protein C06C6.5b protein.
Length = 116
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 172 LRPSQPDRPRQWSPCSKFRPPSRARAGTASSGTPSCGSVS-VPWDWS 35
+ P + R+ P K +PPS + A T+SS TP +S +P ++S
Sbjct: 65 MNPEKVQEKRERHPPKKNKPPSISEALTSSSSTPPSLPISQLPVNYS 111
>AF273796-1|AAG15144.1| 116|Caenorhabditis elegans nuclear receptor
NHR-50 protein.
Length = 116
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 172 LRPSQPDRPRQWSPCSKFRPPSRARAGTASSGTPSCGSVS-VPWDWS 35
+ P + R+ P K +PPS + A T+SS TP +S +P ++S
Sbjct: 65 MNPEKVQEKRERHPPKKNKPPSISEALTSSSSTPPSLPISQLPVNYS 111
>Z93374-8|CAB07555.1| 359|Caenorhabditis elegans Hypothetical
protein C06C6.5a protein.
Length = 359
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 172 LRPSQPDRPRQWSPCSKFRPPSRARAGTASSGTP 71
+ P + R+ P K +PPS + A T+SS TP
Sbjct: 65 MNPEKVQEKRERHPPKKNKPPSISEALTSSSSTP 98
>Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +1
Query: 424 IIPQLIKYSPDTILVIASNPVD 489
I+ L+KY P+TI+ +A++P++
Sbjct: 112 IVRLLLKYQPETIITLANDPIN 133
>Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +1
Query: 424 IIPQLIKYSPDTILVIASNPVD 489
I+ L+KY P+TI+ +A++P++
Sbjct: 112 IVRLLLKYQPETIITLANDPIN 133
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -1
Query: 229 PSCLLERCYS*HSASA*RKLRPSQPDRPRQWSPCSKFRPPSRARAGTASSGTPSCGSVSV 50
P+CL +R S S R + R R +P S P R T S+G P+ +
Sbjct: 480 PACLFKRSNSDEEESGVRTRAGKKEQRRR--TPSSMSETPDRRSPSTVSNGAPNLTAEET 537
Query: 49 P 47
P
Sbjct: 538 P 538
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -1
Query: 229 PSCLLERCYS*HSASA*RKLRPSQPDRPRQWSPCSKFRPPSRARAGTASSGTPSCGSVSV 50
P+CL +R S S R + R R +P S P R T S+G P+ +
Sbjct: 483 PACLFKRSNSDEEESGVRTRAGKKEQRRR--TPSSMSETPDRRSPSTVSNGAPNLTAEET 540
Query: 49 P 47
P
Sbjct: 541 P 541
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -1
Query: 229 PSCLLERCYS*HSASA*RKLRPSQPDRPRQWSPCSKFRPPSRARAGTASSGTPSCGSVSV 50
P+CL +R S S R + R R +P S P R T S+G P+ +
Sbjct: 483 PACLFKRSNSDEEESGVRTRAGKKEQRRR--TPSSMSETPDRRSPSTVSNGAPNLTAEET 540
Query: 49 P 47
P
Sbjct: 541 P 541
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 204 IRNILRQHRESCGHPNLTDP 145
+ NI+ Q R+ C HPNL +P
Sbjct: 830 VLNIVMQLRKCCNHPNLFEP 849
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 204 IRNILRQHRESCGHPNLTDP 145
+ NI+ Q R+ C HPNL +P
Sbjct: 830 VLNIVMQLRKCCNHPNLFEP 849
>AC006829-1|AAF60923.1| 258|Caenorhabditis elegans Hypothetical
protein Y9C12A.1 protein.
Length = 258
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 500 YVRISTGLLAITNIVSGLYFISCGIICL 417
YVR+ G+ + N ++ LYF+ G ICL
Sbjct: 86 YVRLPRGMF-VWNTLNSLYFLLIGTICL 112
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +3
Query: 33 RDQSHGTLTEPQDGVPEEAVPARAREGGRNLEQGDHCRGRSGWDGRSFLY---ADAEC 197
RD S G P+ AR +G L G+ G DG+S Y A+A+C
Sbjct: 86 RDNSQCHCGLQSQGCPDGPPGARGPQGAPGLPGAPGVDGKPGVDGKSLTYVHAAEADC 143
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 496 SEYPRGYWRSPILCPDCTLSAAGLFV*EH 410
+E+ GY +PI CP + GL+V H
Sbjct: 67 TEFTSGYVTTPICCPSRSTILTGLYVHNH 95
>U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical
protein K02B2.1 protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +1
Query: 64 HKMESLKKLFQPVHEKVDETWSKVTIVGVGQ 156
+++E+ KK ++P+ E DE+ S + ++ G+
Sbjct: 189 NRIENYKKQYEPLDESEDESLSFIKVINAGR 219
>U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical
protein F26F4.5 protein.
Length = 465
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 241 KGEMMDLQHGSAFMRNAKIQSSTDYSITAGSKICVVTAGV-RQREGESRLDLVQRN 405
K + DLQ AF++ K + + ++ T I ++ V R+ E E +L+ + ++
Sbjct: 267 KARIQDLQQEIAFLKREKSEQNEEFRQTRKDFILILKEAVLRKDEAERQLETISKS 322
>AL117206-2|CAB60445.1| 303|Caenorhabditis elegans Hypothetical
protein Y67A10A.4 protein.
Length = 303
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +1
Query: 484 VDILTYVTWKISGLPK---HRVIGSGTNLDSARFRYL 585
+D+L T K+S LP H ++G T + R RYL
Sbjct: 8 IDLLEPTTLKLSDLPFDIIHEIVGKMTTFERLRTRYL 44
>AF067950-4|AAG24157.1| 351|Caenorhabditis elegans Serpentine
receptor, class h protein87 protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -3
Query: 548 DPMTRCLGSPLIFHVTYVRISTGLLAI----TNIVSGLYFISCGIICLRTSVFLCTRS 387
D CLG+P IF T S GLL I + L F S + L T++ + R+
Sbjct: 76 DVFLNCLGTPYIFLPTLTGFSVGLLNFLGVPPKIQAWLAFQSLNFMLLSTTILVENRN 133
>AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine
receptor, class h protein83 protein.
Length = 352
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -3
Query: 509 HVTYVRISTGLLAITNIVSGLYFISCGIICLRTSV 405
+VT++ + TG+ +T I ++F++C + L SV
Sbjct: 200 YVTFLALFTGIGVLTEIAQIVFFLACCVYYLFVSV 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,065,981
Number of Sequences: 27780
Number of extensions: 326151
Number of successful extensions: 1169
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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