BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10m13r (716 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 138 5e-33 SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 138 5e-33 SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 138 5e-33 SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 132 4e-31 SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 132 4e-31 SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 87 3e-21 SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 87 2e-17 SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11 SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11 SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11 SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11 SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11 SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11 SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11 SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11 SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11 SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 64 8e-11 SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 64 8e-11 SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11 SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 62 3e-10 SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 62 3e-10 SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 56 4e-08 SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05 SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.006 SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8 SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0 >SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) Length = 446 Score = 138 bits (333), Expect = 5e-33 Identities = 64/65 (98%), Positives = 65/65 (100%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420 Query: 535 EYQQY 521 EYQQY Sbjct: 421 EYQQY 425 >SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) Length = 391 Score = 138 bits (333), Expect = 5e-33 Identities = 64/65 (98%), Positives = 65/65 (100%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS Sbjct: 306 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 365 Query: 535 EYQQY 521 EYQQY Sbjct: 366 EYQQY 370 >SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) Length = 446 Score = 138 bits (333), Expect = 5e-33 Identities = 64/65 (98%), Positives = 65/65 (100%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420 Query: 535 EYQQY 521 EYQQY Sbjct: 421 EYQQY 425 >SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) Length = 747 Score = 132 bits (318), Expect = 4e-31 Identities = 58/65 (89%), Positives = 64/65 (98%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 LKMAATF+GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++ Sbjct: 126 LKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIA 185 Query: 535 EYQQY 521 EYQQY Sbjct: 186 EYQQY 190 >SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) Length = 271 Score = 132 bits (318), Expect = 4e-31 Identities = 58/65 (89%), Positives = 64/65 (98%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 LKMAATF+GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++ Sbjct: 188 LKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIA 247 Query: 535 EYQQY 521 EYQQY Sbjct: 248 EYQQY 252 >SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) Length = 629 Score = 87.0 bits (206), Expect(2) = 3e-21 Identities = 39/54 (72%), Positives = 45/54 (83%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 554 LK AATF+ NSTAIQE F+R +EQF AMFRR+AFLHWYT EGMD +EFTE + N Sbjct: 180 LKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233 Score = 32.7 bits (71), Expect(2) = 3e-21 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = -2 Query: 574 FTEAESNMNDLVSEYQQY 521 + A+SN+NDL+SEYQQY Sbjct: 256 YFSADSNLNDLISEYQQY 273 >SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) Length = 375 Score = 86.6 bits (205), Expect = 2e-17 Identities = 38/64 (59%), Positives = 51/64 (79%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 +KM+A+ I ++TAIQELFKRI + MFRR+AFLHWYT EGMD +F EA++++ DL+S Sbjct: 266 MKMSASCISSNTAIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLIS 325 Query: 535 EYQQ 524 YQQ Sbjct: 326 TYQQ 329 >SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) Length = 536 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 355 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 414 Query: 535 EYQQ 524 +Y++ Sbjct: 415 DYEE 418 >SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 602 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 582 Query: 535 EYQQ 524 +Y++ Sbjct: 583 DYEE 586 >SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 389 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 308 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 367 Query: 535 EYQQ 524 +Y++ Sbjct: 368 DYEE 371 >SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1231 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 742 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 801 Query: 535 EYQQ 524 +Y++ Sbjct: 802 DYEE 805 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 1151 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 1210 Query: 535 EYQQ 524 +Y++ Sbjct: 1211 DYEE 1214 >SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 452 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 371 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430 Query: 535 EYQQ 524 +Y++ Sbjct: 431 DYEE 434 >SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 865 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 356 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 415 Query: 535 EYQQ 524 +Y++ Sbjct: 416 DYEE 419 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 787 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 846 Query: 535 EYQQ 524 +Y++ Sbjct: 847 DYEE 850 >SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 417 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 336 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 395 Query: 535 EYQQ 524 +Y++ Sbjct: 396 DYEE 399 >SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) Length = 885 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 804 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 863 Query: 535 EYQQ 524 +Y++ Sbjct: 864 DYEE 867 Score = 64.1 bits (149), Expect = 1e-10 Identities = 24/64 (37%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TA+ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 371 VQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430 Query: 535 EYQQ 524 +Y++ Sbjct: 431 DYEE 434 >SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) Length = 1036 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 956 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 1015 Query: 535 EYQQ 524 +Y++ Sbjct: 1016 DYEE 1019 >SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) Length = 377 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 296 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 355 Query: 535 EYQQ 524 +Y++ Sbjct: 356 DYEE 359 >SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) Length = 250 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 169 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 228 Query: 535 EYQQ 524 +Y++ Sbjct: 229 DYEE 232 >SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) Length = 451 Score = 64.5 bits (150), Expect = 8e-11 Identities = 25/64 (39%), Positives = 43/64 (67%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 371 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430 Query: 535 EYQQ 524 +Y++ Sbjct: 431 DYEE 434 >SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) Length = 232 Score = 62.5 bits (145), Expect = 3e-10 Identities = 23/64 (35%), Positives = 44/64 (68%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ + + N+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 169 VQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 228 Query: 535 EYQQ 524 +Y++ Sbjct: 229 DYEE 232 >SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) Length = 149 Score = 62.5 bits (145), Expect = 3e-10 Identities = 23/64 (35%), Positives = 44/64 (68%) Frame = -2 Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536 ++ + + N+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Sbjct: 69 VQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 128 Query: 535 EYQQ 524 +Y++ Sbjct: 129 DYEE 132 >SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) Length = 365 Score = 55.6 bits (128), Expect = 4e-08 Identities = 21/51 (41%), Positives = 35/51 (68%) Frame = -2 Query: 676 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 524 I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 297 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347 >SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 65 Score = 46.0 bits (104), Expect = 3e-05 Identities = 16/36 (44%), Positives = 27/36 (75%) Frame = -2 Query: 631 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 524 + ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48 >SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) Length = 488 Score = 38.3 bits (85), Expect = 0.006 Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = -2 Query: 694 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEY 530 + N++ I+ F + ++F +++RKA +H YT +G++ +F + +++ L+ EY Sbjct: 415 LANNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470 >SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 665 Score = 29.1 bits (62), Expect = 3.8 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Frame = -3 Query: 150 DQNSIPTNADSTQTPVPFCFCCTECIKF-GCCHE 52 D+ T+ D P CFC C+ F CCH+ Sbjct: 32 DERCNKTSRDWNDISQPKCFCDDMCVAFKDCCHD 65 >SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 655 Score = 28.7 bits (61), Expect = 5.0 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 Query: 187 SVYFRSAFTNFRSSSQRGLVEYQGM 261 S YF + FTN SQ+G++E QG+ Sbjct: 60 SDYFYAMFTNDMLESQKGVIELQGL 84 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,675,268 Number of Sequences: 59808 Number of extensions: 368441 Number of successful extensions: 923 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 863 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 922 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1901817086 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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