SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m13r
         (716 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)                    138   5e-33
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)                    138   5e-33
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)                    138   5e-33
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)                132   4e-31
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)            132   4e-31
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)                     87   3e-21
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)                   87   2e-17
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)                     64   8e-11
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   8e-11
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   8e-11
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   8e-11
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   8e-11
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   8e-11
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   8e-11
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)                     64   8e-11
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)                      64   8e-11
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)                   64   8e-11
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)                   64   8e-11
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)                      64   8e-11
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)                   62   3e-10
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)                62   3e-10
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)                      56   4e-08
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   3e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)             38   0.006
SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.8  
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.0  

>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 446

 Score =  138 bits (333), Expect = 5e-33
 Identities = 64/65 (98%), Positives = 65/65 (100%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 535 EYQQY 521
           EYQQY
Sbjct: 421 EYQQY 425


>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 391

 Score =  138 bits (333), Expect = 5e-33
 Identities = 64/65 (98%), Positives = 65/65 (100%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 306 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 365

Query: 535 EYQQY 521
           EYQQY
Sbjct: 366 EYQQY 370


>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 446

 Score =  138 bits (333), Expect = 5e-33
 Identities = 64/65 (98%), Positives = 65/65 (100%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           LKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 535 EYQQY 521
           EYQQY
Sbjct: 421 EYQQY 425


>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
          Length = 747

 Score =  132 bits (318), Expect = 4e-31
 Identities = 58/65 (89%), Positives = 64/65 (98%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           LKMAATF+GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++
Sbjct: 126 LKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIA 185

Query: 535 EYQQY 521
           EYQQY
Sbjct: 186 EYQQY 190


>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
          Length = 271

 Score =  132 bits (318), Expect = 4e-31
 Identities = 58/65 (89%), Positives = 64/65 (98%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           LKMAATF+GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++
Sbjct: 188 LKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIA 247

Query: 535 EYQQY 521
           EYQQY
Sbjct: 248 EYQQY 252


>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 629

 Score = 87.0 bits (206), Expect(2) = 3e-21
 Identities = 39/54 (72%), Positives = 45/54 (83%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 554
           LK AATF+ NSTAIQE F+R +EQF AMFRR+AFLHWYT EGMD +EFTE + N
Sbjct: 180 LKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233



 Score = 32.7 bits (71), Expect(2) = 3e-21
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -2

Query: 574 FTEAESNMNDLVSEYQQY 521
           +  A+SN+NDL+SEYQQY
Sbjct: 256 YFSADSNLNDLISEYQQY 273


>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
          Length = 375

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 38/64 (59%), Positives = 51/64 (79%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           +KM+A+ I ++TAIQELFKRI   +  MFRR+AFLHWYT EGMD  +F EA++++ DL+S
Sbjct: 266 MKMSASCISSNTAIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLIS 325

Query: 535 EYQQ 524
            YQQ
Sbjct: 326 TYQQ 329


>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 536

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 355 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 414

Query: 535 EYQQ 524
           +Y++
Sbjct: 415 DYEE 418


>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 602

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 582

Query: 535 EYQQ 524
           +Y++
Sbjct: 583 DYEE 586


>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 389

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 308 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 367

Query: 535 EYQQ 524
           +Y++
Sbjct: 368 DYEE 371


>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1231

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 742 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 801

Query: 535 EYQQ 524
           +Y++
Sbjct: 802 DYEE 805



 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
            ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 1151 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 1210

Query: 535  EYQQ 524
            +Y++
Sbjct: 1211 DYEE 1214


>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 452

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 371 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430

Query: 535 EYQQ 524
           +Y++
Sbjct: 431 DYEE 434


>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 865

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 356 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 415

Query: 535 EYQQ 524
           +Y++
Sbjct: 416 DYEE 419



 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 787 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 846

Query: 535 EYQQ 524
           +Y++
Sbjct: 847 DYEE 850


>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 417

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 336 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 395

Query: 535 EYQQ 524
           +Y++
Sbjct: 396 DYEE 399


>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 885

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 804 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 863

Query: 535 EYQQ 524
           +Y++
Sbjct: 864 DYEE 867



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 24/64 (37%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TA+ E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 371 VQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430

Query: 535 EYQQ 524
           +Y++
Sbjct: 431 DYEE 434


>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 1036

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715  LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
            ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 956  VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 1015

Query: 535  EYQQ 524
            +Y++
Sbjct: 1016 DYEE 1019


>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
          Length = 377

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 296 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 355

Query: 535 EYQQ 524
           +Y++
Sbjct: 356 DYEE 359


>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
          Length = 250

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 169 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 228

Query: 535 EYQQ 524
           +Y++
Sbjct: 229 DYEE 232


>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 451

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 25/64 (39%), Positives = 43/64 (67%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ A   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 371 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430

Query: 535 EYQQ 524
           +Y++
Sbjct: 431 DYEE 434


>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
          Length = 232

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 23/64 (35%), Positives = 44/64 (68%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ +   + N+TAI + + R++ +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 169 VQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 228

Query: 535 EYQQ 524
           +Y++
Sbjct: 229 DYEE 232


>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
          Length = 149

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 23/64 (35%), Positives = 44/64 (68%)
 Frame = -2

Query: 715 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 536
           ++ +   + N+TAI + + R++ +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 69  VQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 128

Query: 535 EYQQ 524
           +Y++
Sbjct: 129 DYEE 132


>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 365

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 21/51 (41%), Positives = 35/51 (68%)
 Frame = -2

Query: 676 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 524
           I E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y++
Sbjct: 297 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347


>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 65

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 16/36 (44%), Positives = 27/36 (75%)
 Frame = -2

Query: 631 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 524
           + ++AF+HWY GEGM+E EF+EA  ++  L  +Y++
Sbjct: 13  YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48


>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
          Length = 488

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = -2

Query: 694 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEY 530
           + N++ I+  F  + ++F  +++RKA +H YT  +G++  +F +   +++ L+ EY
Sbjct: 415 LANNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470


>SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 665

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -3

Query: 150 DQNSIPTNADSTQTPVPFCFCCTECIKF-GCCHE 52
           D+    T+ D      P CFC   C+ F  CCH+
Sbjct: 32  DERCNKTSRDWNDISQPKCFCDDMCVAFKDCCHD 65


>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 655

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 187 SVYFRSAFTNFRSSSQRGLVEYQGM 261
           S YF + FTN    SQ+G++E QG+
Sbjct: 60  SDYFYAMFTNDMLESQKGVIELQGL 84


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,675,268
Number of Sequences: 59808
Number of extensions: 368441
Number of successful extensions: 923
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -