Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m11f
(604 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y6A4 Cluster: UPF0468 protein C16orf80; n=46; Eukaryo... 306 3e-82
UniRef50_Q9LHH6 Cluster: Similarity to unknown protein; n=8; Euk... 257 1e-67
UniRef50_Q7JYP4 Cluster: AT30334p; n=2; Drosophila melanogaster|... 213 3e-54
UniRef50_Q16S99 Cluster: Transcription factor IIB, putative; n=2... 209 3e-53
UniRef50_UPI00015B449A Cluster: PREDICTED: similar to transcript... 197 1e-49
UniRef50_A5KB12 Cluster: Transcription factor IIb, putative; n=1... 155 6e-37
UniRef50_A2DCI3 Cluster: Transcription factor 2B, putative; n=1;... 151 2e-35
UniRef50_Q4S6Q0 Cluster: Chromosome undetermined SCAF14724, whol... 146 4e-34
UniRef50_Q4S6P9 Cluster: Chromosome undetermined SCAF14724, whol... 142 4e-33
UniRef50_Q4Z427 Cluster: Transcription factor iib, putative; n=5... 133 4e-30
UniRef50_UPI00006CAFF9 Cluster: hypothetical protein TTHERM_0023... 105 6e-22
UniRef50_UPI0000660D1B Cluster: Homolog of Brachydanio rerio "Si... 105 1e-21
UniRef50_Q7QZJ6 Cluster: GLP_159_27113_27508; n=1; Giardia lambl... 92 1e-17
UniRef50_Q4S6N2 Cluster: Chromosome undetermined SCAF14724, whol... 91 2e-17
UniRef50_UPI0000F1E56E Cluster: PREDICTED: similar to FLJ42117 p... 49 1e-04
UniRef50_UPI0000D8DB44 Cluster: CDNA FLJ42117 fis, clone TESTI20... 49 1e-04
UniRef50_A7RIH0 Cluster: Predicted protein; n=1; Nematostella ve... 47 4e-04
UniRef50_Q7QZJ5 Cluster: GLP_159_27435_27659; n=1; Giardia lambl... 42 0.011
UniRef50_Q4S6P8 Cluster: Chromosome undetermined SCAF14724, whol... 40 0.045
UniRef50_Q96KV7 Cluster: OTTHUMP00000045700; n=21; Amniota|Rep: ... 38 0.14
UniRef50_Q0VA88 Cluster: WDR90 protein; n=8; Eutheria|Rep: WDR90... 38 0.14
UniRef50_Q73KN5 Cluster: Conserved domain protein; n=1; Treponem... 37 0.32
UniRef50_Q016Y1 Cluster: Transcription factor IIB; n=2; Ostreoco... 34 2.3
UniRef50_Q5KB34 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
>UniRef50_Q9Y6A4 Cluster: UPF0468 protein C16orf80; n=46;
Eukaryota|Rep: UPF0468 protein C16orf80 - Homo sapiens
(Human)
Length = 193
Score = 306 bits (751), Expect = 3e-82
Identities = 143/147 (97%), Positives = 145/147 (98%)
Frame = +2
Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEI GTNVSTTYITCPADPK
Sbjct: 7 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPK 66
Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD
Sbjct: 67 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 126
Query: 524 EGWNQIQFNLADFTRRAYGTNYVETLR 604
+GWNQIQFNL DFTRRAYGTNY+ETLR
Sbjct: 127 DGWNQIQFNLLDFTRRAYGTNYIETLR 153
>UniRef50_Q9LHH6 Cluster: Similarity to unknown protein; n=8;
Eukaryota|Rep: Similarity to unknown protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 238
Score = 257 bits (630), Expect = 1e-67
Identities = 112/147 (76%), Positives = 135/147 (91%)
Frame = +2
Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
QSGFLSILYS+GSKPLQIWDK+V +GH+KR D+DIQS VLE+VG+N+ +TYITCPAD
Sbjct: 7 QSGFLSILYSLGSKPLQIWDKEVVDGHVKRCHDDDIQSNVLEVVGSNIQSTYITCPADLS 66
Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
TLGIKLPFLV+++K++KKYF+FE+Q+LDDKNVRRRFRASN+Q+ TRVKP+ICTMP+++D
Sbjct: 67 ATLGIKLPFLVLVVKDMKKYFSFEIQILDDKNVRRRFRASNFQAVTRVKPYICTMPLKMD 126
Query: 524 EGWNQIQFNLADFTRRAYGTNYVETLR 604
EGWNQIQ NLAD TRRAYGTNY ETLR
Sbjct: 127 EGWNQIQLNLADLTRRAYGTNYAETLR 153
>UniRef50_Q7JYP4 Cluster: AT30334p; n=2; Drosophila
melanogaster|Rep: AT30334p - Drosophila melanogaster
(Fruit fly)
Length = 293
Score = 213 bits (520), Expect = 3e-54
Identities = 95/146 (65%), Positives = 118/146 (80%)
Frame = +2
Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
Q GFL++LYS+GS PL W +NG+IKRI D DI+SLVLEI+G+NVSTT+I CP++ K
Sbjct: 19 QKGFLTVLYSVGSSPLNNWSSYTKNGYIKRIYDEDIKSLVLEIMGSNVSTTFIHCPSECK 78
Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
+ LGIKLPFLV++IKN+ KYF FEV++ DD+ RRFR SN+QS T VKPF MPM +
Sbjct: 79 EQLGIKLPFLVLLIKNMHKYFCFEVKIQDDQRFMRRFRVSNFQSKTSVKPFCTAMPMGMS 138
Query: 524 EGWNQIQFNLADFTRRAYGTNYVETL 601
GWNQIQFNLADFTRRAYG+NY+ET+
Sbjct: 139 PGWNQIQFNLADFTRRAYGSNYLETV 164
>UniRef50_Q16S99 Cluster: Transcription factor IIB, putative; n=2;
Culicidae|Rep: Transcription factor IIB, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 290
Score = 209 bits (511), Expect = 3e-53
Identities = 90/147 (61%), Positives = 118/147 (80%)
Frame = +2
Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
Q GFL++ S GSKPL+IWD +NGH KR+TD +++ + E++G NV+TT++ P P
Sbjct: 7 QRGFLTVFSSSGSKPLEIWDIVTKNGHAKRVTDEELKLMSFELMGANVATTFMVAPKCPC 66
Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
+LG+KLPFLV+++KNLKK+F+FE+Q+LDD+N+ RRFRASNYQS TRV F MP+ L
Sbjct: 67 PSLGVKLPFLVLLVKNLKKFFSFEIQILDDRNLLRRFRASNYQSATRVDNFCTVMPLALT 126
Query: 524 EGWNQIQFNLADFTRRAYGTNYVETLR 604
GWNQIQFNLADFTRRAYGTNY+ET+R
Sbjct: 127 PGWNQIQFNLADFTRRAYGTNYIETVR 153
>UniRef50_UPI00015B449A Cluster: PREDICTED: similar to transcription
factor IIB, putative; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to transcription factor IIB, putative
- Nasonia vitripennis
Length = 248
Score = 197 bits (481), Expect = 1e-49
Identities = 85/147 (57%), Positives = 113/147 (76%)
Frame = +2
Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
Q GF+ +L S GS PL++WD KV+NG ++R+TD +++L LE+ GTNVST Y+ CP DPK
Sbjct: 7 QCGFIPVLQSFGSSPLELWDMKVQNGCVRRVTDEQVRALALELSGTNVSTCYLYCPKDPK 66
Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
+LGI +P+LVMIIK++KKYFTFE+ VLDD+NV RRFR SN+Q R+ F +MP+ L
Sbjct: 67 GSLGIHMPYLVMIIKSMKKYFTFEITVLDDRNVHRRFRMSNFQKMNRIHHFCTSMPLCLH 126
Query: 524 EGWNQIQFNLADFTRRAYGTNYVETLR 604
GWN+I F+L+D TR+AY T YVET R
Sbjct: 127 PGWNEIYFDLSDITRKAYKTGYVETTR 153
>UniRef50_A5KB12 Cluster: Transcription factor IIb, putative; n=1;
Plasmodium vivax|Rep: Transcription factor IIb, putative
- Plasmodium vivax
Length = 369
Score = 155 bits (377), Expect = 6e-37
Identities = 68/146 (46%), Positives = 99/146 (67%)
Frame = +2
Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
Q LS+L S GSKPL +W K + G ++++ D+ I+ +EIV N S +YI +
Sbjct: 7 QPNILSLLLSAGSKPLDLWKTKTKKGCVRKVLDDTIKLSAIEIVSENTSDSYIYTAPEKF 66
Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
+LGI LPF+V+I+KN+ KYF+F + ++DDK RR FR SN+Q+ TR+ CTMPM L+
Sbjct: 67 SSLGISLPFIVLIVKNMNKYFSFRISIMDDKRCRRTFRISNFQTVTRLSNKWCTMPMILN 126
Query: 524 EGWNQIQFNLADFTRRAYGTNYVETL 601
EGWN IQ NL ++T++A+ T Y ET+
Sbjct: 127 EGWNIIQINLQEYTQKAFRTKYQETI 152
>UniRef50_A2DCI3 Cluster: Transcription factor 2B, putative; n=1;
Trichomonas vaginalis G3|Rep: Transcription factor 2B,
putative - Trichomonas vaginalis G3
Length = 203
Score = 151 bits (365), Expect = 2e-35
Identities = 68/144 (47%), Positives = 93/144 (64%)
Frame = +2
Query: 173 FLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTL 352
+ +IL SIG KPL WD V NG+IKR+TD DI++ VLEI G N +IT P + L
Sbjct: 9 YKNILSSIGQKPLADWDVNVENGYIKRLTDQDIRTSVLEITGANAQRNWITMPREQNDKL 68
Query: 353 GIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGW 532
GI LP + +++K L+K+F ++ V+DD +R F+ SN V+ +PM+L GW
Sbjct: 69 GINLPIISLVVKYLEKFFYIDILVMDDTKTKRLFKISNTDMKAHVQQTFTKIPMKLVPGW 128
Query: 533 NQIQFNLADFTRRAYGTNYVETLR 604
N + F++ADF R AYGTNYVETLR
Sbjct: 129 NNVTFDIADFVRSAYGTNYVETLR 152
>UniRef50_Q4S6Q0 Cluster: Chromosome undetermined SCAF14724, whole
genome shotgun sequence; n=5; Tetraodontidae|Rep:
Chromosome undetermined SCAF14724, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 358
Score = 146 bits (354), Expect = 4e-34
Identities = 66/147 (44%), Positives = 97/147 (65%)
Frame = +2
Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
Q+ F S+LYS S PL++W K V+NGHIK + D +I SL +E+ G N TTYITCP DP+
Sbjct: 6 QNSFFSMLYSTESNPLRLWRKIVKNGHIKCVMDEEINSLAIEVQGINTRTTYITCPVDPE 65
Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
+LGI+ PFL M++K + F+FE+ V+DDKN++R+ S +Q T + + +C + +RL
Sbjct: 66 DSLGIRQPFLNMLLKKTGEDFSFEITVIDDKNIQRQICFSTWQ-TAKNQKNLCVIQLRLS 124
Query: 524 EGWNQIQFNLADFTRRAYGTNYVETLR 604
W+ NLA T + T YVET++
Sbjct: 125 TSWDYFNINLARVTNALFETKYVETVK 151
>UniRef50_Q4S6P9 Cluster: Chromosome undetermined SCAF14724, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14724,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 309
Score = 142 bits (345), Expect = 4e-33
Identities = 61/145 (42%), Positives = 93/145 (64%)
Frame = +2
Query: 170 GFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKT 349
G SIL SI PL+ W KKV +GH++ + D DI+S +E+ G N+ +ITCP DP+ +
Sbjct: 127 GIQSILNSIDKDPLRFWRKKVESGHVESVMDEDIRSSAIEVQGRNMQNNFITCPVDPEGS 186
Query: 350 LGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEG 529
LGI+LP L M++K + F+FE+ V+D+ NVRR+ + ++ + K + P+RL +
Sbjct: 187 LGIRLPILNMLLKKTGEDFSFEITVIDNTNVRRQIVQTTFKKDMKAKVCVVCFPIRLSDS 246
Query: 530 WNQIQFNLADFTRRAYGTNYVETLR 604
W +I FNLA+ T +GT YVET +
Sbjct: 247 WERIDFNLAELTNELFGTEYVETAK 271
Score = 37.5 bits (83), Expect = 0.24
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 494 FICTMPMRLDEGWNQIQFNLADFTRRAYGTNYVETLR 604
++ +P+ L W I NLA+ T +GT YVET++
Sbjct: 3 YVVCVPLILAASWEHISINLAELTYELFGTEYVETVK 39
>UniRef50_Q4Z427 Cluster: Transcription factor iib, putative; n=5;
Plasmodium|Rep: Transcription factor iib, putative -
Plasmodium berghei
Length = 384
Score = 133 bits (321), Expect = 4e-30
Identities = 62/146 (42%), Positives = 92/146 (63%)
Frame = +2
Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
Q LS+L S GSKPL+IW + + G ++++ D+ I+ +EI+ N S +YI
Sbjct: 7 QPKILSLLLSAGSKPLEIWKMRTKKGCVRKVLDDSIKLSSIEILSENTSDSYIYTAPGKY 66
Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
+L I LP L + KYF+F + ++D+K RR FR SN+Q+ TR+ CTMPM L+
Sbjct: 67 NSLAISLPIL------MNKYFSFRISIMDNKRCRRTFRISNFQTVTRISNKWCTMPMVLN 120
Query: 524 EGWNQIQFNLADFTRRAYGTNYVETL 601
EGWN +Q NL+D+T +A+ T YVET+
Sbjct: 121 EGWNILQINLSDYTEKAFKTKYVETI 146
>UniRef50_UPI00006CAFF9 Cluster: hypothetical protein
TTHERM_00237370; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00237370 - Tetrahymena
thermophila SB210
Length = 231
Score = 105 bits (253), Expect = 6e-22
Identities = 51/126 (40%), Positives = 79/126 (62%)
Frame = +2
Query: 227 KVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYF 406
K +G I+ I D + ++ V+EIVG N ST YI P K G+KL +L +++KNLKK F
Sbjct: 44 KASDGKIEVIKDEETKTHVVEIVGQNSSTNYIEGPNIHKDGFGLKLTWLHVLVKNLKKDF 103
Query: 407 TFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNLADFTRRAYGTN 586
+F V+V+D K +RRF+ SN+ TRVK + + +++ EGWN F++ ++YGTN
Sbjct: 104 SFVVEVVDHKKQKRRFKFSNWFKDTRVKSTVTNIKLKMQEGWNHFVFDIKHICLKSYGTN 163
Query: 587 YVETLR 604
E ++
Sbjct: 164 LQEIVK 169
>UniRef50_UPI0000660D1B Cluster: Homolog of Brachydanio rerio
"Similar to transcription factor IIB.; n=2; Takifugu
rubripes|Rep: Homolog of Brachydanio rerio "Similar to
transcription factor IIB. - Takifugu rubripes
Length = 358
Score = 105 bits (251), Expect = 1e-21
Identities = 46/141 (32%), Positives = 85/141 (60%)
Frame = +2
Query: 179 SILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGI 358
S+L S S PL++W +NG ++ + D +I+SLV ++ G N+ T Y++ P +P+ LGI
Sbjct: 12 SLLDSTESDPLKLWRIDGKNGLVQSVMDEEIKSLVTDVQGRNLQTAYLSFPLNPEDNLGI 71
Query: 359 KLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQ 538
P M +K ++F ++ +DDK++RR+ + ++ V+ F +P+RL W+
Sbjct: 72 SQPIFNMFLKKTGEHFFCKITAIDDKSIRRQIFLTTFRKKMNVRVFSGCVPIRLPTSWDY 131
Query: 539 IQFNLADFTRRAYGTNYVETL 601
+ +LA+FT + + T YV+T+
Sbjct: 132 VVIDLAEFTYQLFKTKYVKTV 152
>UniRef50_Q7QZJ6 Cluster: GLP_159_27113_27508; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_159_27113_27508 - Giardia lamblia
ATCC 50803
Length = 131
Score = 91.9 bits (218), Expect = 1e-17
Identities = 48/119 (40%), Positives = 72/119 (60%)
Frame = -1
Query: 592 NIVSAVSSSCEVSQVELYLVPAFVQPHGHSTDERLNPCCRLVVAGSKSSTYVFVIKHLNF 413
+++ V S CEV +VELYLV A + GHS DERL+ LVV S++S V V+K L+
Sbjct: 9 DVICTVRSGCEVGEVELYLVKARAKAQGHSADERLDTRSSLVVTCSEASLDVLVVKDLHL 68
Query: 412 KSEILF*IFYYHNQKR*LYSKGLLWIRRACYVRGTDVRSHDFEHQALYIVICYPLYVPI 236
+++IL + Y HN+ L + ++ + RA YV + HDF++ LY+ +C LYV I
Sbjct: 69 EAKILSHVLYKHNKVGQLNCECIIGVCRARYVVCCHIGPHDFQNARLYVWVCNALYVAI 127
>UniRef50_Q4S6N2 Cluster: Chromosome undetermined SCAF14724, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14724,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 117
Score = 91.1 bits (216), Expect = 2e-17
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +2
Query: 182 ILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIK 361
+ YS+ S L +W K+VRNG+++ + D + QS +E+ G N TTYITCP DPK +LGI+
Sbjct: 1 MFYSMESNHLSVWGKEVRNGYVQGVLDEETQSSTIELHGINTRTTYITCPPDPKDSLGIR 60
Query: 362 LPFLVMIIKNLKKYFTFEVQV 424
LPFL +++K + F+FE+ V
Sbjct: 61 LPFLNLLLKKTGEDFSFEITV 81
>UniRef50_UPI0000F1E56E Cluster: PREDICTED: similar to FLJ42117
protein,; n=2; Danio rerio|Rep: PREDICTED: similar to
FLJ42117 protein, - Danio rerio
Length = 768
Score = 48.8 bits (111), Expect = 1e-04
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Frame = +2
Query: 164 QSGFLSILYSI-GSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADP 340
Q G ++S G P+ W R I ++ D +++ V + G N T + P D
Sbjct: 7 QGGLTVDIFSAQGKDPVAKWKLYGRKPSITKVFDKEVKGFVYSLEG-NSQTHKMQLPKDS 65
Query: 341 KKTLGIKLPFLVMIIK-NLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMR 517
K TLG+ FL++ + L K F+ E V D+++++RR S P +P+
Sbjct: 66 KMTLGLIQKFLILQVNIPLGKDFSAEFLVTDEEHLKRRLYLSTVHKELSATPLHARIPLT 125
Query: 518 LD--EGWNQIQFNLADFTRRAY-GTNYV 592
+ W + +L T + GT ++
Sbjct: 126 CHNRDTWCNLCIDLDSLTAVIFRGTRFL 153
>UniRef50_UPI0000D8DB44 Cluster: CDNA FLJ42117 fis, clone
TESTI2005376 (FLJ42117 protein).; n=2; Danio rerio|Rep:
CDNA FLJ42117 fis, clone TESTI2005376 (FLJ42117
protein). - Danio rerio
Length = 663
Score = 48.8 bits (111), Expect = 1e-04
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Frame = +2
Query: 164 QSGFLSILYSI-GSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADP 340
Q G ++S G P+ W R I ++ D +++ V + G N T + P D
Sbjct: 7 QGGLTVDIFSAQGKDPVAKWKLYGRKPSITKVFDKEVKGFVYSLEG-NSQTHKMQLPKDS 65
Query: 341 KKTLGIKLPFLVMIIK-NLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMR 517
K TLG+ FL++ + L K F+ E V D+++++RR S P +P+
Sbjct: 66 KMTLGLIQKFLILQVNIPLGKDFSAEFLVTDEEHLKRRLYLSTVHKELSATPLHARIPLT 125
Query: 518 LD--EGWNQIQFNLADFTRRAY-GTNYV 592
+ W + +L T + GT ++
Sbjct: 126 CHNRDTWCNLCIDLDSLTAVIFRGTRFL 153
>UniRef50_A7RIH0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 966
Score = 46.8 bits (106), Expect = 4e-04
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 173 FLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTL 352
F+ + + G P+ W K+I D D++S V + G + +TT ++ P D K++L
Sbjct: 166 FVEVFSAQGRDPVSKWRLCGNASTAKKIFDRDVKSYVFILEGES-TTTKMSIPKDEKQSL 224
Query: 353 GIKLPFLVM-IIKNLKKYFTFEVQVLD-DKNVRRRFRASNYQSTTRVKPFICTMPMRL 520
+ +L++ + L F+FE+ + D N RR F +S+++ T V P P+ +
Sbjct: 225 FLIQKYLILQLFVPLGHSFSFELGITDMGNNKRRIFMSSSHREVT-VTPLHARFPLSI 281
>UniRef50_Q7QZJ5 Cluster: GLP_159_27435_27659; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_159_27435_27659 - Giardia lamblia
ATCC 50803
Length = 74
Score = 41.9 bits (94), Expect = 0.011
Identities = 23/49 (46%), Positives = 26/49 (53%)
Frame = -2
Query: 291 ISSTRLCISLSVILFMCPLRTFLSQICKGLLPML*RIDRKPD*KVFLNI 145
IS T C+S SV+ FM P T QIC G P I+R PD V NI
Sbjct: 2 ISRTHDCMSGSVMRFMWPFLTVFDQICSGFDPTAYNIERNPDWYVLRNI 50
>UniRef50_Q4S6P8 Cluster: Chromosome undetermined SCAF14724, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14724,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 97
Score = 39.9 bits (89), Expect = 0.045
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 422 VLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNLADFTRRAYGTNYVETL 601
++D+ NV+R+ ++ V P +RL E W +LAD T R + T YVET+
Sbjct: 1 MIDNNNVQRQIFLGSHSREDPV-PLSFRWSLRLSEYWQYFCIDLADVTDRVFRTKYVETV 59
Query: 602 R 604
R
Sbjct: 60 R 60
>UniRef50_Q96KV7 Cluster: OTTHUMP00000045700; n=21; Amniota|Rep:
OTTHUMP00000045700 - Homo sapiens (Human)
Length = 754
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 218 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 394
W + + G + +TD ++ V I G+ + YI P ++LG+ +L ++ + L
Sbjct: 21 WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80
Query: 395 KKYFTFEVQVLDDKNVRRRFRASN 466
K+F + V N R SN
Sbjct: 81 SKHFVIHLDVSSKDNQVIRVSFSN 104
>UniRef50_Q0VA88 Cluster: WDR90 protein; n=8; Eutheria|Rep: WDR90
protein - Homo sapiens (Human)
Length = 730
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 218 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 394
W + + G + +TD ++ V I G+ + YI P ++LG+ +L ++ + L
Sbjct: 21 WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80
Query: 395 KKYFTFEVQVLDDKNVRRRFRASN 466
K+F + V N R SN
Sbjct: 81 SKHFVIHLDVSSKDNQVIRVSFSN 104
>UniRef50_Q73KN5 Cluster: Conserved domain protein; n=1; Treponema
denticola|Rep: Conserved domain protein - Treponema
denticola
Length = 666
Score = 37.1 bits (82), Expect = 0.32
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +2
Query: 212 QIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPF-LVMIIK 388
Q+ D+K H+K I DN + +LV+++ Y + D KK GIK P + IK
Sbjct: 344 QMRDEKSFEKHLKTIKDNKLNALVIDMKDEAGFVRYESKNEDIKKYNGIKYPLDIEKFIK 403
Query: 389 NLKK---YFTFEVQVLDDKNVRR 448
K Y + V DKN+ R
Sbjct: 404 RAKAENIYLIARIVVFKDKNLYR 426
>UniRef50_Q016Y1 Cluster: Transcription factor IIB; n=2;
Ostreococcus|Rep: Transcription factor IIB -
Ostreococcus tauri
Length = 491
Score = 34.3 bits (75), Expect = 2.3
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 350 LGIKLPFLVMIIK-NLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMR 517
LG P L + ++ F+FEV V D + RRR S+ S R P C +P+R
Sbjct: 130 LGATQPVLALQLRAEAGANFSFEVAVRDGADARRRLLFSSSFSEVRATPLHCQVPLR 186
>UniRef50_Q5KB34 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 110
Score = 34.3 bits (75), Expect = 2.3
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 350 LGIKLPFLVMIIKNL-KKYFTFEVQVLDDKNVRRRFRASNYQSTTR 484
LG++LP++ M +K L ++ +FEV V+D + R S+Y+S R
Sbjct: 4 LGVELPWIGMQVKRLSRRELSFEVGVVDSRGREGVIRCSSYKSLAR 49
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,067,100
Number of Sequences: 1657284
Number of extensions: 10512060
Number of successful extensions: 28339
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 27412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28325
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -