Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m11f
         (604 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005152-1|AAH05152.1|  193|Homo sapiens chromosome 16 open read...   306   4e-83
AF093680-1|AAD40382.1|  193|Homo sapiens transcription factor II...   306   4e-83
AF087845-1|AAP97158.1|  193|Homo sapiens EVORF protein.               306   4e-83
BC121186-1|AAI21187.1|  729|Homo sapiens WDR90 protein protein.        38   0.021
BC121185-1|AAI21186.1|  730|Homo sapiens WDR90 protein protein.        38   0.021
AL022341-2|CAC79469.1|  754|Homo sapiens protein ( Human DNA seq...    38   0.021
AK091062-1|BAC03575.1|  492|Homo sapiens  cotransporter.  protein.     38   0.021
AE006464-7|AAK61239.1|  705|Homo sapiens Hypothetical protein pr...    38   0.021
AB067511-1|BAB67817.1|  613|Homo sapiens KIAA1924 protein protein.     38   0.021

>BC005152-1|AAH05152.1|  193|Homo sapiens chromosome 16 open reading
           frame 80 protein.
          Length = 193

 Score =  306 bits (751), Expect = 4e-83
 Identities = 143/147 (97%), Positives = 145/147 (98%)
 Frame = +2

Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
           QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEI GTNVSTTYITCPADPK
Sbjct: 7   QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPK 66

Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
           KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD
Sbjct: 67  KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 126

Query: 524 EGWNQIQFNLADFTRRAYGTNYVETLR 604
           +GWNQIQFNL DFTRRAYGTNY+ETLR
Sbjct: 127 DGWNQIQFNLLDFTRRAYGTNYIETLR 153


>AF093680-1|AAD40382.1|  193|Homo sapiens transcription factor IIB
           protein.
          Length = 193

 Score =  306 bits (751), Expect = 4e-83
 Identities = 143/147 (97%), Positives = 145/147 (98%)
 Frame = +2

Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
           QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEI GTNVSTTYITCPADPK
Sbjct: 7   QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPK 66

Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
           KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD
Sbjct: 67  KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 126

Query: 524 EGWNQIQFNLADFTRRAYGTNYVETLR 604
           +GWNQIQFNL DFTRRAYGTNY+ETLR
Sbjct: 127 DGWNQIQFNLLDFTRRAYGTNYIETLR 153


>AF087845-1|AAP97158.1|  193|Homo sapiens EVORF protein.
          Length = 193

 Score =  306 bits (751), Expect = 4e-83
 Identities = 143/147 (97%), Positives = 145/147 (98%)
 Frame = +2

Query: 164 QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPK 343
           QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEI GTNVSTTYITCPADPK
Sbjct: 7   QSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPK 66

Query: 344 KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 523
           KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD
Sbjct: 67  KTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLD 126

Query: 524 EGWNQIQFNLADFTRRAYGTNYVETLR 604
           +GWNQIQFNL DFTRRAYGTNY+ETLR
Sbjct: 127 DGWNQIQFNLLDFTRRAYGTNYIETLR 153


>BC121186-1|AAI21187.1|  729|Homo sapiens WDR90 protein protein.
          Length = 729

 Score = 38.3 bits (85), Expect = 0.021
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 218 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 394
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 21  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80

Query: 395 KKYFTFEVQVLDDKNVRRRFRASN 466
            K+F   + V    N   R   SN
Sbjct: 81  SKHFVIHLDVSSKDNQVIRVSFSN 104


>BC121185-1|AAI21186.1|  730|Homo sapiens WDR90 protein protein.
          Length = 730

 Score = 38.3 bits (85), Expect = 0.021
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 218 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 394
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 21  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80

Query: 395 KKYFTFEVQVLDDKNVRRRFRASN 466
            K+F   + V    N   R   SN
Sbjct: 81  SKHFVIHLDVSSKDNQVIRVSFSN 104


>AL022341-2|CAC79469.1|  754|Homo sapiens protein ( Human DNA
           sequence from clone LA16c-349E10 on chromosome 16
           Contains(part of) three novel genes, ESTs, STSs, GSSs
           and four CpG islands. leukoencnovel protein).
          Length = 754

 Score = 38.3 bits (85), Expect = 0.021
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 218 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 394
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 21  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80

Query: 395 KKYFTFEVQVLDDKNVRRRFRASN 466
            K+F   + V    N   R   SN
Sbjct: 81  SKHFVIHLDVSSKDNQVIRVSFSN 104


>AK091062-1|BAC03575.1|  492|Homo sapiens  cotransporter.  protein.
          Length = 492

 Score = 38.3 bits (85), Expect = 0.021
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 218 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 394
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 21  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 80

Query: 395 KKYFTFEVQVLDDKNVRRRFRASN 466
            K+F   + V    N   R   SN
Sbjct: 81  SKHFVIHLDVSSKDNQVIRVSFSN 104


>AE006464-7|AAK61239.1|  705|Homo sapiens Hypothetical protein
           protein.
          Length = 705

 Score = 38.3 bits (85), Expect = 0.021
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 218 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 394
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 63  WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 122

Query: 395 KKYFTFEVQVLDDKNVRRRFRASN 466
            K+F   + V    N   R   SN
Sbjct: 123 SKHFVIHLDVSSKDNQVIRVSFSN 146


>AB067511-1|BAB67817.1|  613|Homo sapiens KIAA1924 protein protein.
          Length = 613

 Score = 38.3 bits (85), Expect = 0.021
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 218 WDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNL- 394
           W +  + G +  +TD  ++  V  I G+  +  YI  P    ++LG+   +L ++ + L 
Sbjct: 141 WKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGRYLYVLFRPLP 200

Query: 395 KKYFTFEVQVLDDKNVRRRFRASN 466
            K+F   + V    N   R   SN
Sbjct: 201 SKHFVIHLDVSSKDNQVIRVSFSN 224


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,490,858
Number of Sequences: 237096
Number of extensions: 1656116
Number of successful extensions: 3521
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3515
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)