Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m11f
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.3  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   9.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.3  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage
          protein protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +1

Query: 13 ILVLVVDLSKPLPNREL 63
          ++ L+  +S+P+PN+EL
Sbjct: 36 VIQLLQKISQPIPNQEL 52


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 302 SFPRFRAPGFV 270
           S+PR RAP F+
Sbjct: 110 SYPRMRAPSFI 120


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 398 KYFTFEVQVLDDKNVRRRFR 457
           K FT+ + V  DKNV+   R
Sbjct: 496 KPFTYHIVVNSDKNVKGMVR 515


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 23  LLSICQNHFQTVNYLFI 73
           LL++ +NH +  +Y FI
Sbjct: 553 LLNLSENHIEWFDYAFI 569


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +2

Query: 173 FLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIV 295
           + SIL  I  +  +  D K+R   I  +T   I++L + ++
Sbjct: 224 YTSILLEIRRRSKKSEDDKIRRSSIGFLTRAKIRTLKMTVI 264


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 398 KYFTFEVQVLDDKNVRRRFR 457
           K FT+ + V  DKNV+   R
Sbjct: 496 KPFTYHIVVNSDKNVKGMVR 515


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 398 KYFTFEVQVLDDKNVRRRFR 457
           K FT+ + V  DKNV+   R
Sbjct: 122 KPFTYHIVVNSDKNVKGMVR 141


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 359  KLPFLVMIIKNLKKYFTFEVQVL 427
            K   L  ++  L+KY  + +QVL
Sbjct: 1169 KTSALTTVLTGLRKYTNYTIQVL 1191


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 359  KLPFLVMIIKNLKKYFTFEVQVL 427
            K   L  ++  L+KY  + +QVL
Sbjct: 1165 KTSALTTVLTGLRKYTNYTIQVL 1187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,374
Number of Sequences: 438
Number of extensions: 3404
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)