Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m07f
(583 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.47
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.47
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.47
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.47
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.47
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.47
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.47
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 22 4.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 5.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 5.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 5.8
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.47
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 207 TNSISQNSASNTRSQPLLVL*GKRGQMLNSMKNGQKVNGPRS*RTKRSAHK*QITIGSS 383
T++ SQN +S S K G N+ K+GQ N P+ + H Q T+ ++
Sbjct: 159 TSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNAN 217
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 25.0 bits (52), Expect = 0.47
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 207 TNSISQNSASNTRSQPLLVL*GKRGQMLNSMKNGQKVNGPRS*RTKRSAHK*QITIGSS 383
T++ SQN +S S K G N+ K+GQ N P+ + H Q T+ ++
Sbjct: 159 TSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNAN 217
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.47
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 207 TNSISQNSASNTRSQPLLVL*GKRGQMLNSMKNGQKVNGPRS*RTKRSAHK*QITIGSS 383
T++ SQN +S S K G N+ K+GQ N P+ + H Q T+ ++
Sbjct: 159 TSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNAN 217
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.0 bits (52), Expect = 0.47
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 207 TNSISQNSASNTRSQPLLVL*GKRGQMLNSMKNGQKVNGPRS*RTKRSAHK*QITIGSS 383
T++ SQN +S S K G N+ K+GQ N P+ + H Q T+ ++
Sbjct: 159 TSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNAN 217
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.0 bits (52), Expect = 0.47
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 207 TNSISQNSASNTRSQPLLVL*GKRGQMLNSMKNGQKVNGPRS*RTKRSAHK*QITIGSS 383
T++ SQN +S S K G N+ K+GQ N P+ + H Q T+ ++
Sbjct: 115 TSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNAN 173
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.47
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 207 TNSISQNSASNTRSQPLLVL*GKRGQMLNSMKNGQKVNGPRS*RTKRSAHK*QITIGSS 383
T++ SQN +S S K G N+ K+GQ N P+ + H Q T+ ++
Sbjct: 159 TSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNAN 217
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.47
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 207 TNSISQNSASNTRSQPLLVL*GKRGQMLNSMKNGQKVNGPRS*RTKRSAHK*QITIGSS 383
T++ SQN +S S K G N+ K+GQ N P+ + H Q T+ ++
Sbjct: 159 TSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNAN 217
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 202 LKPTPSHKIPPQIRVHSP 255
++P P H PP ++H P
Sbjct: 28 VQPLPRHFNPPSDKLHHP 45
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 546 YFLAGFLVAFLVRTFFAAALGIFF 475
YF+ F+ FF AL IF+
Sbjct: 53 YFIYAFVAPVKCLAFFCTALVIFY 76
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 546 YFLAGFLVAFLVRTFFAAALGIFF 475
YF+ F+ FF AL IF+
Sbjct: 286 YFIYAFVAPVKCLAFFCTALVIFY 309
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 546 YFLAGFLVAFLVRTFFAAALGIFF 475
YF+ F+ FF AL IF+
Sbjct: 286 YFIYAFVAPVKCLAFFCTALVIFY 309
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,225
Number of Sequences: 336
Number of extensions: 2879
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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