Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m06r
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.7  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    20   9.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    20   9.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    20   9.9  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    20   9.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   9.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    20   9.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    20   9.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    20   9.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 283 GSEETLSYISCSNGSFSRLLHEER 212
           GS   +S+++CS+   S+ + EER
Sbjct: 340 GSLYHISFMACSSAGCSQKVAEER 363


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 373 ATTTRWVNQSARNSPY 420
           +TT  W     +NSPY
Sbjct: 130 STTIHWHGHHQKNSPY 145


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 351 PKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQT 244
           P+ P      G  L     D  +   +RLA+ H Q+
Sbjct: 53  PQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQS 88


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 351 PKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQT 244
           P+ P      G  L     D  +   +RLA+ H Q+
Sbjct: 53  PQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQS 88


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 351 PKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQT 244
           P+ P      G  L     D  +   +RLA+ H Q+
Sbjct: 53  PQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQS 88


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 84  RSVQILYSVFFSNRTLLISYLCENIVI 4
           R VQI++  F S +  L    CE ++I
Sbjct: 196 RMVQIIHKKFSSIQMQLKQSTCEAVMI 222


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 351 PKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQT 244
           P+ P      G  L     D  +   +RLA+ H Q+
Sbjct: 53  PQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQS 88


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 351 PKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQT 244
           P+ P      G  L     D  +   +RLA+ H Q+
Sbjct: 53  PQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQS 88


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 351 PKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQT 244
           P+ P      G  L     D  +   +RLA+ H Q+
Sbjct: 9   PQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQS 44


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 351 PKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQT 244
           P+ P      G  L     D  +   +RLA+ H Q+
Sbjct: 53  PQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQS 88


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 351 PKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQT 244
           P+ P      G  L     D  +   +RLA+ H Q+
Sbjct: 53  PQHPYAAPAPGHGLQPTMGDYTQLQPQRLASTHLQS 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,097
Number of Sequences: 336
Number of extensions: 1879
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)