Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m06f
         (514 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   4.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 185 GSEETLSYISCSNGSFSRLLHEER 256
           GS   +S+++CS+   S+ + EER
Sbjct: 340 GSLYHISFMACSSAGCSQKVAEER 363


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 390 VQILYSVFFSNRTLLISYLCENIVINFIDY 479
           V I+YS+       +  +LC + V  F +Y
Sbjct: 129 VVIIYSICVQTEKSVFDFLCRHTVEYFQNY 158


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 95  ATTTRWVNQSARNSPY 48
           +TT  W     +NSPY
Sbjct: 130 STTIHWHGHHQKNSPY 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,906
Number of Sequences: 336
Number of extensions: 2113
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)