Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m06f
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 145 1e-35
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 77 7e-15
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 55 3e-08
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 55 3e-08
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 33 0.091
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 33 0.091
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.0
U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly glu... 28 3.4
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 3.4
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 27 7.9
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 7.9
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 7.9
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 145 bits (352), Expect = 1e-35
Identities = 69/106 (65%), Positives = 77/106 (72%)
Frame = +3
Query: 6 LDAVIEFGIEDSLLVRRITGRLIHPPSGRSYHEEFHPPKKPMTDDVTGEALIKRSDDNVE 185
LD V+EF I D LLVRRITGRL H SGRSYH EF PPK PM DD+TGE LI+RSDDN E
Sbjct: 133 LDTVVEFNIADDLLVRRITGRLFHIASGRSYHLEFKPPKVPMKDDLTGEPLIRRSDDNEE 192
Query: 186 ALKKRLATYHAQTVPLVDYYMRKGLHWRVDASKAADDVFNKIDNIF 323
L+KRL YH TVPLVDYY + G+H VDA+K DV ID +F
Sbjct: 193 TLRKRLVQYHQMTVPLVDYYKKHGVHVAVDAAKPMTDVKAHIDQVF 238
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 77.0 bits (181), Expect = 7e-15
Identities = 32/83 (38%), Positives = 54/83 (65%)
Frame = +3
Query: 6 LDAVIEFGIEDSLLVRRITGRLIHPPSGRSYHEEFHPPKKPMTDDVTGEALIKRSDDNVE 185
L+ ++E + +L+ R++ +L+HP SGR+Y+ E +PPK+ DD+TGE L KRS D +E
Sbjct: 104 LNLIVELKVPRKVLIDRLSKQLVHPASGRAYNLEVNPPKEEGKDDITGEPLFKRSTDQLE 163
Query: 186 ALKKRLATYHAQTVPLVDYYMRK 254
++RL Y ++DYY ++
Sbjct: 164 VARRRLEVYDKTENKVLDYYKKQ 186
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Frame = +3
Query: 87 GRSYHEEFHPPKKPMTDDVTGEALIKR----------SDDNVEALKKRLATYHAQTVPLV 236
G+ + E K + DV E L+KR +DDN + +KKRL T+ T P+V
Sbjct: 115 GQQFESEIQEAKLVLFFDVAEETLVKRLLHRAQTSGRADDNADTIKKRLHTFVTSTAPVV 174
Query: 237 DYYMRKGLHWRVDASKAADDVF 302
DYY KG R++A + DD+F
Sbjct: 175 DYYESKGKLVRINAEGSVDDIF 196
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Frame = +3
Query: 87 GRSYHEEFHPPKKPMTDDVTGEALIKR----------SDDNVEALKKRLATYHAQTVPLV 236
G+ + E K + DV E L+KR +DDN + +KKRL T+ T P+V
Sbjct: 115 GQQFESEIQEAKLVLFFDVAEETLVKRLLHRAQTSGRADDNADTIKKRLHTFVTSTAPVV 174
Query: 237 DYYMRKGLHWRVDASKAADDVF 302
DYY KG R++A + DD+F
Sbjct: 175 DYYESKGKLVRINAEGSVDDIF 196
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/53 (37%), Positives = 36/53 (67%)
Frame = +3
Query: 165 RSDDNVEALKKRLATYHAQTVPLVDYYMRKGLHWRVDASKAADDVFNKIDNIF 323
R+DDN E+LKKR+ TY+ QT P+++++ + GL V + + D V+ ++ +F
Sbjct: 133 RTDDNEESLKKRVETYNQQTFPIIEHFEKSGLVREVKSERPVDVVYADVEKVF 185
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/53 (33%), Positives = 36/53 (67%)
Frame = +3
Query: 165 RSDDNVEALKKRLATYHAQTVPLVDYYMRKGLHWRVDASKAADDVFNKIDNIF 323
R+DDNVE+LKKR+ TY+ T P+++++ + G+ V++ + +V+ + +F
Sbjct: 133 RTDDNVESLKKRVETYNQSTFPIIEHFEKVGMVREVNSERPVTEVYEDVVKVF 185
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 33.5 bits (73), Expect = 0.091
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 162 KRSDDNVEALKKRLATYHAQTVPLVDYYMRKGLHWRVDASKAADDVFNKIDNIFKSRIF 338
KRSDD+ +A++ R+ + T+P++ KG VD D VF ++ + ++
Sbjct: 645 KRSDDDSDAVRSRMEYFKKNTLPMLKTLDDKGKLRVVDGDADPDTVFKEVVQVIDRTLY 703
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 33.5 bits (73), Expect = 0.091
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 162 KRSDDNVEALKKRLATYHAQTVPLVDYYMRKGLHWRVDASKAADDVFNKIDNIFKSRIF 338
KRSDD+ +A++ R+ + T+P++ KG VD D VF ++ + ++
Sbjct: 645 KRSDDDSDAVRSRMEYFKKNTLPMLKTLDDKGKLRVVDGDADPDTVFKEVVQVIDRTLY 703
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +2
Query: 8 GRRNRVRNRGQSARKENYGQTDSPT*WS*LSRRVP 112
G+RN N G S+ NYGQ DS WS +R VP
Sbjct: 2031 GKRNSSTNTGNSSDIVNYGQYDSMQ-WS-FARSVP 2063
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +2
Query: 8 GRRNRVRNRGQSARKENYGQTDSPT*WS*LSRRVP 112
G+RN N G S+ NYGQ DS WS +R VP
Sbjct: 2031 GKRNSSTNTGNSSDIVNYGQYDSMQ-WS-FARSVP 2063
>U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform c
protein.
Length = 670
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 120 KKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQTVP 230
+KPM T A + +DD V KR+A HA +VP
Sbjct: 110 QKPMNKRPTSSASVDSNDDGVHIPAKRMA--HASSVP 144
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 120 KKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQTVP 230
+KPM T A + +DD V KR+A HA +VP
Sbjct: 1087 QKPMNKRPTSSASVDSNDDGVHIPAKRMA--HASSVP 1121
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical protein
C08H9.2 protein.
Length = 1220
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 90 RSYHEEFHPPKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQ 221
+ Y PK ++D+T + D +EAL+ +L Y AQ
Sbjct: 955 QDYDVNISIPKDNSSEDITVTGQTENVDQALEALRGKLGEYEAQ 998
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 9 DAVIEFGIEDSLLVRRITGRLIHPPSGRSYHEE--FHPPKKPMTDDVTGEALIKRSDDNV 182
D +EFG S R+I I +++ PPK TD++TG+ + K + +
Sbjct: 366 DVFMEFGHLSSETRRKIEDFRIRRKEAEEFNDNSPVKPPKARKTDELTGK-ISKEQPEEM 424
Query: 183 EALKKRL 203
++ +K L
Sbjct: 425 KSAEKSL 431
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 9 DAVIEFGIEDSLLVRRITGRLIHPPSGRSYHEE--FHPPKKPMTDDVTGEALIKRSDDNV 182
D +EFG S R+I I +++ PPK TD++TG+ + K + +
Sbjct: 366 DVFMEFGHLSSETRRKIEDFRIRRKEAEEFNDNSPVKPPKARKTDELTGK-ISKEQPEEM 424
Query: 183 EALKKRL 203
++ +K L
Sbjct: 425 KSAEKSL 431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,720,192
Number of Sequences: 27780
Number of extensions: 201844
Number of successful extensions: 540
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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