Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m03r
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -1

Query: 479 IIVNPMASMCKKNSKEIDC 423
           +++NP+ ++C K  K+  C
Sbjct: 451 VVLNPLDAICNKPRKDAVC 469


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 694 YINVTRYRVPKKKFTP 741
           Y N ++YRV   KFTP
Sbjct: 93  YTNWSQYRVKIGKFTP 108


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 330 YCFETYHMYCKTTE 371
           YCF  YH+  K+ +
Sbjct: 286 YCFNLYHLASKSNQ 299


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 330 YCFETYHMYCKTTE 371
           YCF  YH+  K+ +
Sbjct: 286 YCFNLYHLASKSNQ 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,128
Number of Sequences: 336
Number of extensions: 3748
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)