BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10m03r (776 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 25 0.60 AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 5.5 AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.5 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.5 AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 5.5 DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 22 7.3 DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.7 DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.7 DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.7 DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.7 AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 9.7 AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.7 AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.7 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 25.4 bits (53), Expect = 0.60 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 Query: 385 NFSSFYAKKLISKQSISLLFFLHIEAIGFTIIL 483 NF+ FY+++ I+ Q + L FL+ F IL Sbjct: 796 NFADFYSEESINNQGLECLRFLNEVISDFDAIL 828 >AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone esterase protein. Length = 567 Score = 22.2 bits (45), Expect = 5.5 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 166 NFCVATAKNVNIHLSSLQFVELDTCLKQLHYRH 264 +F V+ N +++S+Q+ L+ K LHY H Sbjct: 494 DFWVSFVNNGVPNVNSVQWPRLNPNEKSLHYLH 526 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 22.2 bits (45), Expect = 5.5 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = -1 Query: 50 YLTCVPSCW 24 Y TCV SCW Sbjct: 102 YATCVLSCW 110 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 22.2 bits (45), Expect = 5.5 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = -1 Query: 50 YLTCVPSCW 24 Y TCV SCW Sbjct: 155 YATCVLSCW 163 >AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. Length = 567 Score = 22.2 bits (45), Expect = 5.5 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 166 NFCVATAKNVNIHLSSLQFVELDTCLKQLHYRH 264 +F V+ N +++S+Q+ L+ K LHY H Sbjct: 494 DFWVSFVNNGVPNVNSVQWPRLNPNEKSLHYLH 526 >DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. Length = 132 Score = 21.8 bits (44), Expect = 7.3 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -1 Query: 461 ASMCKKNSKEIDCF 420 ++ CKK+SK + CF Sbjct: 109 SNSCKKSSKLLQCF 122 >DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 9.7 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -3 Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472 E+ K I ++ N+Y + N +Y+N + NN+ Sbjct: 74 ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105 >DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 9.7 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -3 Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472 E+ K I ++ N+Y + N +Y+N + NN+ Sbjct: 74 ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105 >DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 9.7 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -3 Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472 E+ K I ++ N+Y + N +Y+N + NN+ Sbjct: 74 ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105 >DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 9.7 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -3 Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472 E+ K I ++ N+Y + N +Y+N + NN+ Sbjct: 74 ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105 >AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-activated ion channelvariant T protein. Length = 288 Score = 21.4 bits (43), Expect = 9.7 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = -1 Query: 209 DKCMLTFLAVATQKLNLLLSIFNENKMYFCSEFYMLARKIVPIPIVL 69 D CML L L + +S FN++ F L+ I I IV+ Sbjct: 92 DLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVV 138 >AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-activated ion channelvariant L protein. Length = 664 Score = 21.4 bits (43), Expect = 9.7 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = -1 Query: 209 DKCMLTFLAVATQKLNLLLSIFNENKMYFCSEFYMLARKIVPIPIVL 69 D CML L L + +S FN++ F L+ I I IV+ Sbjct: 92 DLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVV 138 >AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-activated ion channel protein. Length = 632 Score = 21.4 bits (43), Expect = 9.7 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = -1 Query: 209 DKCMLTFLAVATQKLNLLLSIFNENKMYFCSEFYMLARKIVPIPIVL 69 D CML L L + +S FN++ F L+ I I IV+ Sbjct: 92 DLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVV 138 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 190,019 Number of Sequences: 438 Number of extensions: 3854 Number of successful extensions: 16 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 24396777 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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