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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m03r
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.60 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   5.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   5.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.5  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   7.3  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.7  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.7  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.7  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.7  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   9.7  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   9.7  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   9.7  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 385 NFSSFYAKKLISKQSISLLFFLHIEAIGFTIIL 483
           NF+ FY+++ I+ Q +  L FL+     F  IL
Sbjct: 796 NFADFYSEESINNQGLECLRFLNEVISDFDAIL 828


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 166 NFCVATAKNVNIHLSSLQFVELDTCLKQLHYRH 264
           +F V+   N   +++S+Q+  L+   K LHY H
Sbjct: 494 DFWVSFVNNGVPNVNSVQWPRLNPNEKSLHYLH 526


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 50  YLTCVPSCW 24
           Y TCV SCW
Sbjct: 102 YATCVLSCW 110


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 50  YLTCVPSCW 24
           Y TCV SCW
Sbjct: 155 YATCVLSCW 163


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 166 NFCVATAKNVNIHLSSLQFVELDTCLKQLHYRH 264
           +F V+   N   +++S+Q+  L+   K LHY H
Sbjct: 494 DFWVSFVNNGVPNVNSVQWPRLNPNEKSLHYLH 526


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 461 ASMCKKNSKEIDCF 420
           ++ CKK+SK + CF
Sbjct: 109 SNSCKKSSKLLQCF 122


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472
           E+ K    I ++ N+Y + N  +Y+N + NN+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472
           E+ K    I ++ N+Y + N  +Y+N + NN+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472
           E+ K    I ++ N+Y + N  +Y+N + NN+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472
           E+ K    I ++ N+Y + N  +Y+N + NN+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -1

Query: 209 DKCMLTFLAVATQKLNLLLSIFNENKMYFCSEFYMLARKIVPIPIVL 69
           D CML  L      L + +S FN++       F  L+  I  I IV+
Sbjct: 92  DLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVV 138


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -1

Query: 209 DKCMLTFLAVATQKLNLLLSIFNENKMYFCSEFYMLARKIVPIPIVL 69
           D CML  L      L + +S FN++       F  L+  I  I IV+
Sbjct: 92  DLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVV 138


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -1

Query: 209 DKCMLTFLAVATQKLNLLLSIFNENKMYFCSEFYMLARKIVPIPIVL 69
           D CML  L      L + +S FN++       F  L+  I  I IV+
Sbjct: 92  DLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVV 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,019
Number of Sequences: 438
Number of extensions: 3854
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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