Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m03r
(776 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 25 0.60
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 5.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.5
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 5.5
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 22 7.3
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.7
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.7
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.7
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.7
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 9.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.7
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 25.4 bits (53), Expect = 0.60
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 385 NFSSFYAKKLISKQSISLLFFLHIEAIGFTIIL 483
NF+ FY+++ I+ Q + L FL+ F IL
Sbjct: 796 NFADFYSEESINNQGLECLRFLNEVISDFDAIL 828
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 166 NFCVATAKNVNIHLSSLQFVELDTCLKQLHYRH 264
+F V+ N +++S+Q+ L+ K LHY H
Sbjct: 494 DFWVSFVNNGVPNVNSVQWPRLNPNEKSLHYLH 526
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 50 YLTCVPSCW 24
Y TCV SCW
Sbjct: 102 YATCVLSCW 110
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 50 YLTCVPSCW 24
Y TCV SCW
Sbjct: 155 YATCVLSCW 163
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 166 NFCVATAKNVNIHLSSLQFVELDTCLKQLHYRH 264
+F V+ N +++S+Q+ L+ K LHY H
Sbjct: 494 DFWVSFVNNGVPNVNSVQWPRLNPNEKSLHYLH 526
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 461 ASMCKKNSKEIDCF 420
++ CKK+SK + CF
Sbjct: 109 SNSCKKSSKLLQCF 122
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472
E+ K I ++ N+Y + N +Y+N + NN+
Sbjct: 74 ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472
E+ K I ++ N+Y + N +Y+N + NN+
Sbjct: 74 ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472
E+ K I ++ N+Y + N +Y+N + NN+
Sbjct: 74 ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 567 EKKKCSTKILNMWNDYLFINPISYDNTS*NNS 472
E+ K I ++ N+Y + N +Y+N + NN+
Sbjct: 74 ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNN 105
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 9.7
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 209 DKCMLTFLAVATQKLNLLLSIFNENKMYFCSEFYMLARKIVPIPIVL 69
D CML L L + +S FN++ F L+ I I IV+
Sbjct: 92 DLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVV 138
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 9.7
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 209 DKCMLTFLAVATQKLNLLLSIFNENKMYFCSEFYMLARKIVPIPIVL 69
D CML L L + +S FN++ F L+ I I IV+
Sbjct: 92 DLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVV 138
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 9.7
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 209 DKCMLTFLAVATQKLNLLLSIFNENKMYFCSEFYMLARKIVPIPIVL 69
D CML L L + +S FN++ F L+ I I IV+
Sbjct: 92 DLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVV 138
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,019
Number of Sequences: 438
Number of extensions: 3854
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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