Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m03f
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    26   0.21 
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.1  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
 Frame = +1

Query: 283 NEPNVSIPQLANLLVERTQNT-----NWVVVYKALITVHHLLAYGNERFTQYLASSNSTF 447
           NE NV   +    L+ +   T      W ++     TV  +L Y +   T++ +  N  F
Sbjct: 186 NESNVETVKFNLFLLSQAVETFNDIFGWTILQTVFFTVPRVLMYFDIFITEHESKPNWLF 245

Query: 448 QLNNFL 465
            L NFL
Sbjct: 246 FLANFL 251


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 180 VSGC*QPIVYCLTRHFH 130
           ++GC  P V    +HFH
Sbjct: 34  IAGCVSPFVIGYVKHFH 50


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 258 MFLFRRYHFFCS 223
           +FL   YHFFC+
Sbjct: 161 LFLLCIYHFFCA 172


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +1

Query: 289 PNVSIPQLANLLVERTQNTNWVVVYKAL 372
           P+  +PQ+  +  +   N N + +YK +
Sbjct: 187 PSKDVPQMITITFDDAINNNNIELYKEI 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,525
Number of Sequences: 336
Number of extensions: 2871
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)