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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m03f
         (605 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0009 - 27015346-27015705,27016552-27016676,27016778-270168...    62   3e-10
01_06_0359 + 28722524-28722613,28722794-28722863,28723062-287231...    58   7e-09
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757...    48   6e-06
05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625     48   8e-06
03_02_0536 - 9284079-9286034                                           46   3e-05
01_06_1557 - 38231826-38233391                                         45   5e-05
06_03_1008 + 26873805-26873891,26874038-26874107,26874237-268743...    41   7e-04
01_06_0645 + 30826267-30826307,30826403-30826454,30826580-308266...    39   0.003
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496...    38   0.005
05_01_0093 - 617515-619260                                             33   0.13 
01_05_0630 - 23811576-23811728,23812473-23812561,23812644-238127...    32   0.41 
10_08_0766 + 20437772-20438956                                         31   0.94 
01_06_1296 + 36088467-36088582,36088697-36088819,36088938-36089607     30   1.6  
10_08_0769 + 20452130-20453314                                         29   2.2  
05_01_0309 - 2439746-2440247,2440618-2440692,2441325-2441826,244...    29   3.8  
05_06_0250 - 26682207-26683811                                         28   5.0  
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629...    28   6.6  
08_02_1110 + 24371934-24374763,24375034-24375518                       28   6.6  
05_07_0308 + 29115892-29116083,29116771-29116885,29116978-291170...    27   8.7  

>05_07_0009 -
           27015346-27015705,27016552-27016676,27016778-27016853,
           27016923-27017105,27018000-27018077,27018159-27018239,
           27018347-27018412,27018491-27018556,27019126-27019176,
           27019286-27019378,27019498-27019625,27019713-27019851,
           27021039-27021136,27021332-27021401,27021565-27021654
          Length = 567

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
 Frame = +1

Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTN--EPNVSIPQLANLLVERTQNT-NWVVVYKALIT 378
           ++ KAT      PK++HL  +V  T+   P   +    + L  R   T NW+V  K L+ 
Sbjct: 35  AIVKATNHVECPPKERHLRKIVAATSIARPRADVAYCIHALSRRLAKTRNWIVALKTLVV 94

Query: 379 VHHLLAYGNERFTQYL---ASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYL 549
           +H LL  G+  F + L   A      QL+NF D S       + I +D S ++R Y  +L
Sbjct: 95  IHRLLREGDPTFREELLNFAQRGRILQLSNFKDDS-------SPIAWDCSAWVRTYGLFL 147

Query: 550 NEKALSYRTVAFD 588
            E+   +R + +D
Sbjct: 148 EERLECFRVLKYD 160


>01_06_0359 +
           28722524-28722613,28722794-28722863,28723062-28723159,
           28724029-28724167,28724243-28724370,28724500-28724592,
           28724707-28724757,28725405-28725470,28725568-28725633,
           28725900-28725977,28726248-28726427,28726502-28726577,
           28726660-28726823,28727569-28727931
          Length = 553

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
 Frame = +1

Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTN--EPNVSIPQLANLLVERTQNT-NWVVVYKALIT 378
           ++ KAT      PK++HL  +   T+   P   +    + L  R   T NW+V  K L+ 
Sbjct: 35  AIVKATNHVECPPKERHLRKIAAATSIGRPRADVAYCIHALARRLAKTRNWIVALKTLVV 94

Query: 379 VHHLLAYGNERF-TQYLASSNST--FQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYL 549
           +H LL  G+  F  ++L  +      QL+NF D S         + +D S ++R Y  +L
Sbjct: 95  IHRLLRDGDPTFREEFLTFTQRVRILQLSNFKDDS-------TPVAWDYSSWVRTYGLFL 147

Query: 550 NEKALSYRTVAFD 588
            E+   +R + +D
Sbjct: 148 EERLECFRVLKYD 160


>02_05_1123 +
           34275272-34275331,34275451-34275523,34275631-34275728,
           34276012-34276153,34276261-34276361,34276633-34276716,
           34276949-34277014,34277102-34277167,34277324-34277404,
           34277489-34277566,34277687-34277848,34277936-34278011,
           34278111-34278223,34278323-34278751
          Length = 542

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
 Frame = +1

Query: 208 SVCKATTEEMIAPKKKHL--DYLVHCT-NEPNVSIPQLANLLVERTQNT-NWVVVYKALI 375
           ++ KAT      PK+K++  D   H +       +      L  R   T NW V  K LI
Sbjct: 25  AIVKATNHVENLPKEKYIRGDIFYHLSAGRARADVAYCIRALGRRLSKTRNWAVALKTLI 84

Query: 376 TVHHLLAYGNERFTQ----YLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAK 543
            +H  L   +  F      Y  SS     L+ F D S  +        +D S ++R YA 
Sbjct: 85  VIHRALREVDPTFRDELISYGRSSTHMLHLSYFKDDSSAEA-------WDYSAWVRNYAL 137

Query: 544 YLNEKALSYRTVAFD 588
           YL E+  S+R + +D
Sbjct: 138 YLEERLESFRVLKYD 152


>05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625
          Length = 768

 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
 Frame = +1

Query: 187 AGQGLAKSVCKATTE-EMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT-NWVVV 360
           A   L  ++ KAT   E     ++H+  ++  T      +      L  R   T +W V 
Sbjct: 195 AASELDVAIVKATRHSESFPADERHVREVIALTLHSRAYVGACVASLSRRLGRTRSWAVA 254

Query: 361 YKALITVHHLLAYGNERFTQ--YLASSNSTFQLN--NFLDKSGVQGAAGARIGYDMSPFI 528
            K L  VH LLA G++ F Q  + A+   T  LN  +F D S           +D S F+
Sbjct: 255 LKTLALVHRLLADGDQAFEQEVFYATRRGTRMLNMSDFCDHSRTD-------AWDFSAFV 307

Query: 529 RRYAKYLNEKALSYRTVA 582
           R YA YL+++ L YR  A
Sbjct: 308 RTYAAYLDDR-LEYRMQA 324


>03_02_0536 - 9284079-9286034
          Length = 651

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +1

Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT-NWVVVYKALITVHH 387
           + KAT+ +    +++H+  ++H T+     +         R   T ++VV  K+L+ VH 
Sbjct: 36  IVKATSHDDEPAEERHIREILHLTSGSRAHVAAAVAGCSRRLSRTRDYVVALKSLMLVHR 95

Query: 388 LLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNEK 558
           LLA G+  F + L   ++T +    L+ S  +  A +   +D S F+R YA YL+++
Sbjct: 96  LLADGDPSFHRELL--HATRRGTRLLNLSDFRDEAHSG-SWDHSAFVRTYALYLDQR 149


>01_06_1557 - 38231826-38233391
          Length = 521

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
 Frame = +1

Query: 199 LAKSVCKATTE-EMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNTN-WVVVYKAL 372
           LA ++ KAT   E +   ++H+  ++  T      +    + +  R   T  W V  KAL
Sbjct: 34  LAVAIVKATAHGESVPGDERHVQEILTLTCYSRARVAACVSAVSRRLGRTRAWAVAVKAL 93

Query: 373 ITVHHLLAYGNERFTQ--YLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKY 546
             VH LLA G+  + Q  +LA+      L+  +       ++ +R  +D   F+R YA Y
Sbjct: 94  ALVHRLLADGDPAYEQEVFLATRRGRRMLD--VSHRFPHRSSRSRATWDFHGFVRAYAAY 151

Query: 547 LNEK 558
           L+++
Sbjct: 152 LDDR 155


>06_03_1008 +
           26873805-26873891,26874038-26874107,26874237-26874334,
           26874505-26874643,26874778-26874860,26875145-26875195,
           26875305-26875370,26875465-26875530,26875637-26875717,
           26876042-26876119,26876218-26876394,26876467-26876545,
           26876752-26876870,26877029-26877430
          Length = 531

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
 Frame = +1

Query: 208 SVCKATTEEMIAPKKKHLDYLVHCT--NEPNVSIPQLANLLVERTQNT-NWVVVYKALIT 378
           ++ KAT      PK+++L  ++  T  N P   +      L  R   T NW+V  K LI 
Sbjct: 34  AIVKATNHVECPPKERYLRKILFATSANRPRSDVGYSICTLARRLSKTKNWIVALKTLIV 93

Query: 379 VHHLLAYGNERFTQ-YLASS--NSTFQLNNFLDKS 474
           +H LL  G+  F + +L  S   +  Q+  F D S
Sbjct: 94  IHRLLREGDGTFKEDFLNYSYRGTILQIPQFKDDS 128


>01_06_0645 +
           30826267-30826307,30826403-30826454,30826580-30826659,
           30826804-30826882,30826962-30827045,30827131-30827276,
           30827362-30827628,30827825-30827907,30828162-30828271,
           30828544-30829159,30829471-30829620,30829700-30829800
          Length = 602

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
 Frame = +1

Query: 199 LAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT--NWVVVYKAL 372
           + + V  AT++E   P    L  +   T     S   + N+L +R  NT  NW  VYKAL
Sbjct: 28  IEQKVLDATSDEPWGPHGSDLADIARATKSYGDS-EIIMNVLWQRLGNTLANWRHVYKAL 86

Query: 373 ITVHHLLAYGNERFTQYLASSNS 441
             + +LLA G ER    +  ++S
Sbjct: 87  AVIEYLLANGTERAADGIVDNSS 109


>02_05_1147 -
           34447519-34448042,34448126-34449092,34449458-34449657,
           34449867-34450051,34450130-34450228,34450316-34450357,
           34450516-34450860,34450956-34451101,34451213-34451296,
           34451424-34451502,34451596-34451675,34451824-34451875,
           34451992-34452026
          Length = 945

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
 Frame = +1

Query: 133 KMAGQTINDRLLAARHSIAG-QGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
           K+  QT+ D        +    G+ + +  AT+ E   P    L  +   T   +     
Sbjct: 3   KVFDQTVRDLKREVNKKVLKVPGIEQKILDATSNEPWGPHGSLLAEIAQATQNYH-EYQM 61

Query: 310 LANLLVERTQNT--NWVVVYKALITVHHLLAYGNERFTQYLASSN---STFQLNNFLDKS 474
           + N++ +R  +T  NW  VYK LI + +L+A+G ER    +   +   ST     ++D S
Sbjct: 62  VMNVVWKRINDTGKNWRHVYKGLIVLDYLVAHGTERVIDDIREHSYQISTLADFQYIDSS 121

Query: 475 GVQGAAGAR 501
           G    +  R
Sbjct: 122 GRDQGSNVR 130


>05_01_0093 - 617515-619260
          Length = 581

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
 Frame = +1

Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT-NWVVVYKALITVH 384
           ++ +AT+ E    + +H+  +V  T          A  L  R   T ++VV  K L   H
Sbjct: 32  AIVRATSHEDAPAEDRHVREVVTLTAHSRPYTAACAASLSRRLSRTRDYVVAAKCLALAH 91

Query: 385 HLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNEKA 561
            L+A G+  F   L               +  +  A +   +D S F+R YA YL+ +A
Sbjct: 92  RLVADGDPHFRHELVRPAGRRGEPMLALLAEFRDEAHSA-SWDHSAFVRAYALYLDHRA 149


>01_05_0630 -
           23811576-23811728,23812473-23812561,23812644-23812764,
           23812867-23812992,23813399-23813505,23813742-23813856,
           23815071-23815274
          Length = 304

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +1

Query: 472 SGVQGAAGARIGYDMSPFIRRYAKYLN 552
           SG   +A ARIG  ++P+I RYA +LN
Sbjct: 266 SGYHQSAWARIGRAVNPYIHRYAPFLN 292


>10_08_0766 + 20437772-20438956
          Length = 394

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = -1

Query: 341 FWVRSTSKLASCGIDTLGSFV--QCTR*SKCFFFGAIISSVVALQTDFANPCPAMLCRAA 168
           F + +  + AS  ID  G  V  QC +  +CF  G  +    A  T  A PC   LC + 
Sbjct: 55  FTIGTPPQPASAVIDLAGELVWTQCKQCGRCFEQGTPLFDPTASNTYRAEPCGTPLCESI 114

Query: 167 NS 162
            S
Sbjct: 115 PS 116


>01_06_1296 + 36088467-36088582,36088697-36088819,36088938-36089607
          Length = 302

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
 Frame = +1

Query: 115 FLIHNVK-MAGQTINDRLLAARHSIAGQGLAKSVCK-ATTEEMIAPKKKHLDYLVHCTNE 288
           F  H ++  A   + D++ +AR ++      + + + AT+ +   P  K +  +     E
Sbjct: 7   FSFHELRRQASSYLTDKIRSARLALTDVTPTQLMTEEATSGDASPPNVKTMSLIARQAFE 66

Query: 289 PN--VSIPQLANLLVERTQNTNWVVVYKALITVHHLLAYG 402
            +  V I  + +    R     W   YKAL+ + HLL +G
Sbjct: 67  IDEYVRISDILHKRFARFDRRQWREAYKALLLLEHLLTHG 106


>10_08_0769 + 20452130-20453314
          Length = 394

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = -1

Query: 341 FWVRSTSKLASCGIDTLGSFV--QCTR*SKCFFFGAIISSVVALQTDFANPCPAMLCRAA 168
           F + +  + AS  ID  G  V  QC + S+CF     +    A  T  A PC   LC + 
Sbjct: 55  FTIGTPPQPASAVIDLAGELVWTQCKQCSRCFEQDTPLFDPTASNTYRAEPCGTPLCESI 114

Query: 167 NS 162
            S
Sbjct: 115 PS 116


>05_01_0309 -
           2439746-2440247,2440618-2440692,2441325-2441826,
           2442366-2442579,2442654-2442725
          Length = 454

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +1

Query: 121 IHNVKMAGQTINDRLLAARHSIAGQGLA---KSVCKATT 228
           IH++K AG  I++ L      IAG GLA     VCK  T
Sbjct: 338 IHSLKKAGPEISELLTKCSIGIAGTGLAVLLSVVCKMAT 376


>05_06_0250 - 26682207-26683811
          Length = 534

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 140 AIFTLCIKKNNLHVYTALFSGVFRLNS 60
           ++FT C +   LH+ + +F GV R+N+
Sbjct: 263 SVFTSCTQLRVLHLKSCMFDGVLRVNA 289


>12_02_0618 -
           21262021-21262117,21262429-21262466,21262933-21262986,
           21263274-21263438,21263523-21263759,21263857-21263918,
           21264543-21264656,21264816-21264942,21266200-21266218,
           21266338-21266428,21266932-21267094,21267182-21267330,
           21268147-21268287,21268368-21268533,21268568-21268631,
           21268729-21269084,21269759-21269977,21270328-21270433,
           21270713-21270942
          Length = 865

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 20/60 (33%), Positives = 23/60 (38%)
 Frame = +1

Query: 100 TCKLFFLIHNVKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHC 279
           TCKL    HN +    T     L A+    G  + K    ATT   I    K    LVHC
Sbjct: 128 TCKLIVSSHNFENTPSTEELENLVAQIQATGADIVKI---ATTATEIVDVAKMFQILVHC 184


>08_02_1110 + 24371934-24374763,24375034-24375518
          Length = 1104

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 388  LLAYGNERFTQYLASSN-STFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNEKAL 564
            LL +G  R T+ L  +      L+ FL + GV+GAA     YD++  +     YL+   L
Sbjct: 825  LLGWGANRSTKLLFYTYLPNGSLSGFLHRGGVKGAAEWAPRYDIALGVAHAVAYLHHDCL 884


>05_07_0308 +
           29115892-29116083,29116771-29116885,29116978-29117087,
           29118225-29118350,29118450-29118570,29118665-29118749,
           29118854-29118967,29119061-29119100,29119517-29119665,
           29120223-29120412,29121674-29122228,29123588-29123815,
           29123904-29124044,29124134-29124334,29124447-29124728
          Length = 882

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 487 AAGARIGYDMSPFIRRYAKYLN 552
           +A A+IG  ++P+I RYA +LN
Sbjct: 318 SAWAKIGRIVNPYIHRYAPFLN 339


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,725,520
Number of Sequences: 37544
Number of extensions: 323037
Number of successful extensions: 750
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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