Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m03f
(605 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0009 - 27015346-27015705,27016552-27016676,27016778-270168... 62 3e-10
01_06_0359 + 28722524-28722613,28722794-28722863,28723062-287231... 58 7e-09
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 48 6e-06
05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625 48 8e-06
03_02_0536 - 9284079-9286034 46 3e-05
01_06_1557 - 38231826-38233391 45 5e-05
06_03_1008 + 26873805-26873891,26874038-26874107,26874237-268743... 41 7e-04
01_06_0645 + 30826267-30826307,30826403-30826454,30826580-308266... 39 0.003
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 38 0.005
05_01_0093 - 617515-619260 33 0.13
01_05_0630 - 23811576-23811728,23812473-23812561,23812644-238127... 32 0.41
10_08_0766 + 20437772-20438956 31 0.94
01_06_1296 + 36088467-36088582,36088697-36088819,36088938-36089607 30 1.6
10_08_0769 + 20452130-20453314 29 2.2
05_01_0309 - 2439746-2440247,2440618-2440692,2441325-2441826,244... 29 3.8
05_06_0250 - 26682207-26683811 28 5.0
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 28 6.6
08_02_1110 + 24371934-24374763,24375034-24375518 28 6.6
05_07_0308 + 29115892-29116083,29116771-29116885,29116978-291170... 27 8.7
>05_07_0009 -
27015346-27015705,27016552-27016676,27016778-27016853,
27016923-27017105,27018000-27018077,27018159-27018239,
27018347-27018412,27018491-27018556,27019126-27019176,
27019286-27019378,27019498-27019625,27019713-27019851,
27021039-27021136,27021332-27021401,27021565-27021654
Length = 567
Score = 62.5 bits (145), Expect = 3e-10
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTN--EPNVSIPQLANLLVERTQNT-NWVVVYKALIT 378
++ KAT PK++HL +V T+ P + + L R T NW+V K L+
Sbjct: 35 AIVKATNHVECPPKERHLRKIVAATSIARPRADVAYCIHALSRRLAKTRNWIVALKTLVV 94
Query: 379 VHHLLAYGNERFTQYL---ASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYL 549
+H LL G+ F + L A QL+NF D S + I +D S ++R Y +L
Sbjct: 95 IHRLLREGDPTFREELLNFAQRGRILQLSNFKDDS-------SPIAWDCSAWVRTYGLFL 147
Query: 550 NEKALSYRTVAFD 588
E+ +R + +D
Sbjct: 148 EERLECFRVLKYD 160
>01_06_0359 +
28722524-28722613,28722794-28722863,28723062-28723159,
28724029-28724167,28724243-28724370,28724500-28724592,
28724707-28724757,28725405-28725470,28725568-28725633,
28725900-28725977,28726248-28726427,28726502-28726577,
28726660-28726823,28727569-28727931
Length = 553
Score = 57.6 bits (133), Expect = 7e-09
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTN--EPNVSIPQLANLLVERTQNT-NWVVVYKALIT 378
++ KAT PK++HL + T+ P + + L R T NW+V K L+
Sbjct: 35 AIVKATNHVECPPKERHLRKIAAATSIGRPRADVAYCIHALARRLAKTRNWIVALKTLVV 94
Query: 379 VHHLLAYGNERF-TQYLASSNST--FQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYL 549
+H LL G+ F ++L + QL+NF D S + +D S ++R Y +L
Sbjct: 95 IHRLLRDGDPTFREEFLTFTQRVRILQLSNFKDDS-------TPVAWDYSSWVRTYGLFL 147
Query: 550 NEKALSYRTVAFD 588
E+ +R + +D
Sbjct: 148 EERLECFRVLKYD 160
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 48.0 bits (109), Expect = 6e-06
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHL--DYLVHCT-NEPNVSIPQLANLLVERTQNT-NWVVVYKALI 375
++ KAT PK+K++ D H + + L R T NW V K LI
Sbjct: 25 AIVKATNHVENLPKEKYIRGDIFYHLSAGRARADVAYCIRALGRRLSKTRNWAVALKTLI 84
Query: 376 TVHHLLAYGNERFTQ----YLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAK 543
+H L + F Y SS L+ F D S + +D S ++R YA
Sbjct: 85 VIHRALREVDPTFRDELISYGRSSTHMLHLSYFKDDSSAEA-------WDYSAWVRNYAL 137
Query: 544 YLNEKALSYRTVAFD 588
YL E+ S+R + +D
Sbjct: 138 YLEERLESFRVLKYD 152
>05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625
Length = 768
Score = 47.6 bits (108), Expect = 8e-06
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Frame = +1
Query: 187 AGQGLAKSVCKATTE-EMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT-NWVVV 360
A L ++ KAT E ++H+ ++ T + L R T +W V
Sbjct: 195 AASELDVAIVKATRHSESFPADERHVREVIALTLHSRAYVGACVASLSRRLGRTRSWAVA 254
Query: 361 YKALITVHHLLAYGNERFTQ--YLASSNSTFQLN--NFLDKSGVQGAAGARIGYDMSPFI 528
K L VH LLA G++ F Q + A+ T LN +F D S +D S F+
Sbjct: 255 LKTLALVHRLLADGDQAFEQEVFYATRRGTRMLNMSDFCDHSRTD-------AWDFSAFV 307
Query: 529 RRYAKYLNEKALSYRTVA 582
R YA YL+++ L YR A
Sbjct: 308 RTYAAYLDDR-LEYRMQA 324
>03_02_0536 - 9284079-9286034
Length = 651
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +1
Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT-NWVVVYKALITVHH 387
+ KAT+ + +++H+ ++H T+ + R T ++VV K+L+ VH
Sbjct: 36 IVKATSHDDEPAEERHIREILHLTSGSRAHVAAAVAGCSRRLSRTRDYVVALKSLMLVHR 95
Query: 388 LLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNEK 558
LLA G+ F + L ++T + L+ S + A + +D S F+R YA YL+++
Sbjct: 96 LLADGDPSFHRELL--HATRRGTRLLNLSDFRDEAHSG-SWDHSAFVRTYALYLDQR 149
>01_06_1557 - 38231826-38233391
Length = 521
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Frame = +1
Query: 199 LAKSVCKATTE-EMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNTN-WVVVYKAL 372
LA ++ KAT E + ++H+ ++ T + + + R T W V KAL
Sbjct: 34 LAVAIVKATAHGESVPGDERHVQEILTLTCYSRARVAACVSAVSRRLGRTRAWAVAVKAL 93
Query: 373 ITVHHLLAYGNERFTQ--YLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKY 546
VH LLA G+ + Q +LA+ L+ + ++ +R +D F+R YA Y
Sbjct: 94 ALVHRLLADGDPAYEQEVFLATRRGRRMLD--VSHRFPHRSSRSRATWDFHGFVRAYAAY 151
Query: 547 LNEK 558
L+++
Sbjct: 152 LDDR 155
>06_03_1008 +
26873805-26873891,26874038-26874107,26874237-26874334,
26874505-26874643,26874778-26874860,26875145-26875195,
26875305-26875370,26875465-26875530,26875637-26875717,
26876042-26876119,26876218-26876394,26876467-26876545,
26876752-26876870,26877029-26877430
Length = 531
Score = 41.1 bits (92), Expect = 7e-04
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHLDYLVHCT--NEPNVSIPQLANLLVERTQNT-NWVVVYKALIT 378
++ KAT PK+++L ++ T N P + L R T NW+V K LI
Sbjct: 34 AIVKATNHVECPPKERYLRKILFATSANRPRSDVGYSICTLARRLSKTKNWIVALKTLIV 93
Query: 379 VHHLLAYGNERFTQ-YLASS--NSTFQLNNFLDKS 474
+H LL G+ F + +L S + Q+ F D S
Sbjct: 94 IHRLLREGDGTFKEDFLNYSYRGTILQIPQFKDDS 128
>01_06_0645 +
30826267-30826307,30826403-30826454,30826580-30826659,
30826804-30826882,30826962-30827045,30827131-30827276,
30827362-30827628,30827825-30827907,30828162-30828271,
30828544-30829159,30829471-30829620,30829700-30829800
Length = 602
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 199 LAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT--NWVVVYKAL 372
+ + V AT++E P L + T S + N+L +R NT NW VYKAL
Sbjct: 28 IEQKVLDATSDEPWGPHGSDLADIARATKSYGDS-EIIMNVLWQRLGNTLANWRHVYKAL 86
Query: 373 ITVHHLLAYGNERFTQYLASSNS 441
+ +LLA G ER + ++S
Sbjct: 87 AVIEYLLANGTERAADGIVDNSS 109
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Frame = +1
Query: 133 KMAGQTINDRLLAARHSIAG-QGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
K+ QT+ D + G+ + + AT+ E P L + T +
Sbjct: 3 KVFDQTVRDLKREVNKKVLKVPGIEQKILDATSNEPWGPHGSLLAEIAQATQNYH-EYQM 61
Query: 310 LANLLVERTQNT--NWVVVYKALITVHHLLAYGNERFTQYLASSN---STFQLNNFLDKS 474
+ N++ +R +T NW VYK LI + +L+A+G ER + + ST ++D S
Sbjct: 62 VMNVVWKRINDTGKNWRHVYKGLIVLDYLVAHGTERVIDDIREHSYQISTLADFQYIDSS 121
Query: 475 GVQGAAGAR 501
G + R
Sbjct: 122 GRDQGSNVR 130
>05_01_0093 - 617515-619260
Length = 581
Score = 33.5 bits (73), Expect = 0.13
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT-NWVVVYKALITVH 384
++ +AT+ E + +H+ +V T A L R T ++VV K L H
Sbjct: 32 AIVRATSHEDAPAEDRHVREVVTLTAHSRPYTAACAASLSRRLSRTRDYVVAAKCLALAH 91
Query: 385 HLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNEKA 561
L+A G+ F L + + A + +D S F+R YA YL+ +A
Sbjct: 92 RLVADGDPHFRHELVRPAGRRGEPMLALLAEFRDEAHSA-SWDHSAFVRAYALYLDHRA 149
>01_05_0630 -
23811576-23811728,23812473-23812561,23812644-23812764,
23812867-23812992,23813399-23813505,23813742-23813856,
23815071-23815274
Length = 304
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 472 SGVQGAAGARIGYDMSPFIRRYAKYLN 552
SG +A ARIG ++P+I RYA +LN
Sbjct: 266 SGYHQSAWARIGRAVNPYIHRYAPFLN 292
>10_08_0766 + 20437772-20438956
Length = 394
Score = 30.7 bits (66), Expect = 0.94
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1
Query: 341 FWVRSTSKLASCGIDTLGSFV--QCTR*SKCFFFGAIISSVVALQTDFANPCPAMLCRAA 168
F + + + AS ID G V QC + +CF G + A T A PC LC +
Sbjct: 55 FTIGTPPQPASAVIDLAGELVWTQCKQCGRCFEQGTPLFDPTASNTYRAEPCGTPLCESI 114
Query: 167 NS 162
S
Sbjct: 115 PS 116
>01_06_1296 + 36088467-36088582,36088697-36088819,36088938-36089607
Length = 302
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +1
Query: 115 FLIHNVK-MAGQTINDRLLAARHSIAGQGLAKSVCK-ATTEEMIAPKKKHLDYLVHCTNE 288
F H ++ A + D++ +AR ++ + + + AT+ + P K + + E
Sbjct: 7 FSFHELRRQASSYLTDKIRSARLALTDVTPTQLMTEEATSGDASPPNVKTMSLIARQAFE 66
Query: 289 PN--VSIPQLANLLVERTQNTNWVVVYKALITVHHLLAYG 402
+ V I + + R W YKAL+ + HLL +G
Sbjct: 67 IDEYVRISDILHKRFARFDRRQWREAYKALLLLEHLLTHG 106
>10_08_0769 + 20452130-20453314
Length = 394
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1
Query: 341 FWVRSTSKLASCGIDTLGSFV--QCTR*SKCFFFGAIISSVVALQTDFANPCPAMLCRAA 168
F + + + AS ID G V QC + S+CF + A T A PC LC +
Sbjct: 55 FTIGTPPQPASAVIDLAGELVWTQCKQCSRCFEQDTPLFDPTASNTYRAEPCGTPLCESI 114
Query: 167 NS 162
S
Sbjct: 115 PS 116
>05_01_0309 -
2439746-2440247,2440618-2440692,2441325-2441826,
2442366-2442579,2442654-2442725
Length = 454
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 121 IHNVKMAGQTINDRLLAARHSIAGQGLA---KSVCKATT 228
IH++K AG I++ L IAG GLA VCK T
Sbjct: 338 IHSLKKAGPEISELLTKCSIGIAGTGLAVLLSVVCKMAT 376
>05_06_0250 - 26682207-26683811
Length = 534
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 140 AIFTLCIKKNNLHVYTALFSGVFRLNS 60
++FT C + LH+ + +F GV R+N+
Sbjct: 263 SVFTSCTQLRVLHLKSCMFDGVLRVNA 289
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +1
Query: 100 TCKLFFLIHNVKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHC 279
TCKL HN + T L A+ G + K ATT I K LVHC
Sbjct: 128 TCKLIVSSHNFENTPSTEELENLVAQIQATGADIVKI---ATTATEIVDVAKMFQILVHC 184
>08_02_1110 + 24371934-24374763,24375034-24375518
Length = 1104
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 388 LLAYGNERFTQYLASSN-STFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNEKAL 564
LL +G R T+ L + L+ FL + GV+GAA YD++ + YL+ L
Sbjct: 825 LLGWGANRSTKLLFYTYLPNGSLSGFLHRGGVKGAAEWAPRYDIALGVAHAVAYLHHDCL 884
>05_07_0308 +
29115892-29116083,29116771-29116885,29116978-29117087,
29118225-29118350,29118450-29118570,29118665-29118749,
29118854-29118967,29119061-29119100,29119517-29119665,
29120223-29120412,29121674-29122228,29123588-29123815,
29123904-29124044,29124134-29124334,29124447-29124728
Length = 882
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 487 AAGARIGYDMSPFIRRYAKYLN 552
+A A+IG ++P+I RYA +LN
Sbjct: 318 SAWAKIGRIVNPYIHRYAPFLN 339
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,725,520
Number of Sequences: 37544
Number of extensions: 323037
Number of successful extensions: 750
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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