BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m03f
(605 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128498-1|AAM75091.1| 468|Drosophila melanogaster RH47395p pro... 283 1e-76
AE014297-576|AAF54050.1| 468|Drosophila melanogaster CG2520-PA ... 283 1e-76
AF075247-1|AAD08669.1| 468|Drosophila melanogaster synapse-enri... 281 5e-76
AF160975-1|AAF05113.1| 784|Drosophila melanogaster Liquid facet... 31 0.92
AE014296-1284|AAN12042.2| 784|Drosophila melanogaster CG8532-PC... 31 0.92
AE014296-1283|AAN12041.1| 824|Drosophila melanogaster CG8532-PD... 31 0.92
AE014296-1282|AAF50542.2| 824|Drosophila melanogaster CG8532-PB... 31 0.92
AE014296-1281|AAS65058.1| 831|Drosophila melanogaster CG8532-PE... 31 0.92
AE014296-1280|AAF50543.3| 831|Drosophila melanogaster CG8532-PA... 31 0.92
AY060606-1|AAL28154.1| 649|Drosophila melanogaster GH02671p pro... 30 2.8
AF233291-1|AAF43421.1| 642|Drosophila melanogaster epsin-like p... 30 2.8
AF160976-1|AAF05114.1| 616|Drosophila melanogaster Liquid facet... 30 2.8
AE014297-3149|AAF55991.2| 243|Drosophila melanogaster CG31170-P... 30 2.8
AE014297-3148|AAF55990.3| 633|Drosophila melanogaster CG31170-P... 30 2.8
BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p pro... 29 4.9
AY069824-1|AAL39969.1| 907|Drosophila melanogaster SD07276p pro... 29 4.9
AE014297-4778|AAN14281.1| 1121|Drosophila melanogaster CG1815-PB... 29 4.9
AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC... 29 4.9
AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA... 29 4.9
BT023838-1|AAZ86759.1| 455|Drosophila melanogaster LD13915p pro... 28 8.6
BT022726-1|AAY55142.1| 264|Drosophila melanogaster RH35407p pro... 28 8.6
AY047512-1|AAK77244.1| 206|Drosophila melanogaster GH01822p pro... 28 8.6
AE014296-1701|AAF50233.1| 259|Drosophila melanogaster CG8329-PA... 28 8.6
AE013599-2015|AAF58167.1| 441|Drosophila melanogaster CG8090-PA... 28 8.6
>AY128498-1|AAM75091.1| 468|Drosophila melanogaster RH47395p
protein.
Length = 468
Score = 283 bits (694), Expect = 1e-76
Identities = 133/160 (83%), Positives = 143/160 (89%), Gaps = 4/160 (2%)
Frame = +1
Query: 136 MAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLA 315
MAGQTINDRLLAARHS+AGQGLAKSVCKATTEE I PKKKHLDYLVHCTNEPNVSIP LA
Sbjct: 3 MAGQTINDRLLAARHSLAGQGLAKSVCKATTEECIGPKKKHLDYLVHCTNEPNVSIPHLA 62
Query: 316 NLLVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQ---- 483
NLL+ER+QN NWVVVYK+LIT HHL+AYGNERF QYLASSNSTF L++FLDK VQ
Sbjct: 63 NLLIERSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGM 122
Query: 484 GAAGARIGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
G G R+GYDMSPFIRRYAKYLNEK+LSYR +AFDFCKVK
Sbjct: 123 GVPGGRMGYDMSPFIRRYAKYLNEKSLSYRAMAFDFCKVK 162
>AE014297-576|AAF54050.1| 468|Drosophila melanogaster CG2520-PA
protein.
Length = 468
Score = 283 bits (694), Expect = 1e-76
Identities = 133/160 (83%), Positives = 143/160 (89%), Gaps = 4/160 (2%)
Frame = +1
Query: 136 MAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLA 315
MAGQTINDRLLAARHS+AGQGLAKSVCKATTEE I PKKKHLDYLVHCTNEPNVSIP LA
Sbjct: 3 MAGQTINDRLLAARHSLAGQGLAKSVCKATTEECIGPKKKHLDYLVHCTNEPNVSIPHLA 62
Query: 316 NLLVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQ---- 483
NLL+ER+QN NWVVVYK+LIT HHL+AYGNERF QYLASSNSTF L++FLDK VQ
Sbjct: 63 NLLIERSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGM 122
Query: 484 GAAGARIGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
G G R+GYDMSPFIRRYAKYLNEK+LSYR +AFDFCKVK
Sbjct: 123 GVPGGRMGYDMSPFIRRYAKYLNEKSLSYRAMAFDFCKVK 162
>AF075247-1|AAD08669.1| 468|Drosophila melanogaster
synapse-enriched clathrin adaptorprotein LAP protein.
Length = 468
Score = 281 bits (689), Expect = 5e-76
Identities = 132/160 (82%), Positives = 142/160 (88%), Gaps = 4/160 (2%)
Frame = +1
Query: 136 MAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLA 315
MAGQTINDRLLAARHS+AGQGLAKSVCKATTEE I PKKKHLDYLVHC NEPNVSIP LA
Sbjct: 3 MAGQTINDRLLAARHSLAGQGLAKSVCKATTEECIGPKKKHLDYLVHCANEPNVSIPHLA 62
Query: 316 NLLVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQ---- 483
NLL+ER+QN NWVVVYK+LIT HHL+AYGNERF QYLASSNSTF L++FLDK VQ
Sbjct: 63 NLLIERSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGM 122
Query: 484 GAAGARIGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
G G R+GYDMSPFIRRYAKYLNEK+LSYR +AFDFCKVK
Sbjct: 123 GVPGGRMGYDMSPFIRRYAKYLNEKSLSYRAMAFDFCKVK 162
>AF160975-1|AAF05113.1| 784|Drosophila melanogaster Liquid facets
protein.
Length = 784
Score = 31.5 bits (68), Expect = 0.92
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 VKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
V +AG N + LA +S A V +AT+ + P + + T V+ +
Sbjct: 3 VNVAGLRRNIKNLAHNYSDA----QVKVREATSNDPWGPSAAIMSEIAELTYNV-VAFSE 57
Query: 310 LANLLVERTQN--TNWVVVYKALITVHHLLAYGNERFTQ 420
+ ++ +R + NW VYKALI + +L+ G+E+ Q
Sbjct: 58 IMQMIWKRLNDHGKNWRHVYKALILLEYLIKTGSEKVAQ 96
>AE014296-1284|AAN12042.2| 784|Drosophila melanogaster CG8532-PC,
isoform C protein.
Length = 784
Score = 31.5 bits (68), Expect = 0.92
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 VKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
V +AG N + LA +S A V +AT+ + P + + T V+ +
Sbjct: 3 VNVAGLRRNIKNLAHNYSDA----QVKVREATSNDPWGPSAAIMSEIAELTYNV-VAFSE 57
Query: 310 LANLLVERTQN--TNWVVVYKALITVHHLLAYGNERFTQ 420
+ ++ +R + NW VYKALI + +L+ G+E+ Q
Sbjct: 58 IMQMIWKRLNDHGKNWRHVYKALILLEYLIKTGSEKVAQ 96
>AE014296-1283|AAN12041.1| 824|Drosophila melanogaster CG8532-PD,
isoform D protein.
Length = 824
Score = 31.5 bits (68), Expect = 0.92
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 VKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
V +AG N + LA +S A V +AT+ + P + + T V+ +
Sbjct: 3 VNVAGLRRNIKNLAHNYSDA----QVKVREATSNDPWGPSAAIMSEIAELTYNV-VAFSE 57
Query: 310 LANLLVERTQN--TNWVVVYKALITVHHLLAYGNERFTQ 420
+ ++ +R + NW VYKALI + +L+ G+E+ Q
Sbjct: 58 IMQMIWKRLNDHGKNWRHVYKALILLEYLIKTGSEKVAQ 96
>AE014296-1282|AAF50542.2| 824|Drosophila melanogaster CG8532-PB,
isoform B protein.
Length = 824
Score = 31.5 bits (68), Expect = 0.92
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 VKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
V +AG N + LA +S A V +AT+ + P + + T V+ +
Sbjct: 3 VNVAGLRRNIKNLAHNYSDA----QVKVREATSNDPWGPSAAIMSEIAELTYNV-VAFSE 57
Query: 310 LANLLVERTQN--TNWVVVYKALITVHHLLAYGNERFTQ 420
+ ++ +R + NW VYKALI + +L+ G+E+ Q
Sbjct: 58 IMQMIWKRLNDHGKNWRHVYKALILLEYLIKTGSEKVAQ 96
>AE014296-1281|AAS65058.1| 831|Drosophila melanogaster CG8532-PE,
isoform E protein.
Length = 831
Score = 31.5 bits (68), Expect = 0.92
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 VKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
V +AG N + LA +S A V +AT+ + P + + T V+ +
Sbjct: 10 VNVAGLRRNIKNLAHNYSDA----QVKVREATSNDPWGPSAAIMSEIAELTYNV-VAFSE 64
Query: 310 LANLLVERTQN--TNWVVVYKALITVHHLLAYGNERFTQ 420
+ ++ +R + NW VYKALI + +L+ G+E+ Q
Sbjct: 65 IMQMIWKRLNDHGKNWRHVYKALILLEYLIKTGSEKVAQ 103
>AE014296-1280|AAF50543.3| 831|Drosophila melanogaster CG8532-PA,
isoform A protein.
Length = 831
Score = 31.5 bits (68), Expect = 0.92
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 VKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
V +AG N + LA +S A V +AT+ + P + + T V+ +
Sbjct: 10 VNVAGLRRNIKNLAHNYSDA----QVKVREATSNDPWGPSAAIMSEIAELTYNV-VAFSE 64
Query: 310 LANLLVERTQN--TNWVVVYKALITVHHLLAYGNERFTQ 420
+ ++ +R + NW VYKALI + +L+ G+E+ Q
Sbjct: 65 IMQMIWKRLNDHGKNWRHVYKALILLEYLIKTGSEKVAQ 103
>AY060606-1|AAL28154.1| 649|Drosophila melanogaster GH02671p
protein.
Length = 649
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERT---QNTNWVVVYKALITV 381
V +AT ++ P + L + T + P++ ++L +R TNW YK+L+ +
Sbjct: 32 VREATNDDPWGPTGPLMQELAYSTFSYE-TFPEVMSMLWKRMLQDNKTNWRRTYKSLLLL 90
Query: 382 HHLLAYGNER 411
++L+ G+ER
Sbjct: 91 NYLVRNGSER 100
>AF233291-1|AAF43421.1| 642|Drosophila melanogaster epsin-like
protein protein.
Length = 642
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERT---QNTNWVVVYKALITV 381
V +AT ++ P + L + T + P++ ++L +R TNW YK+L+ +
Sbjct: 25 VREATNDDPWGPTGPLMQELAYSTFSYE-TFPEVMSMLWKRMLQDNKTNWRRTYKSLLLL 83
Query: 382 HHLLAYGNER 411
++L+ G+ER
Sbjct: 84 NYLVRNGSER 93
>AF160976-1|AAF05114.1| 616|Drosophila melanogaster Liquid facets
protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQN--TNWVVVYKALITVH 384
V +AT+ + P + + T V+ ++ ++ +R + NW VYKALI +
Sbjct: 2 VREATSNDPWGPSAAIMSEIAELTYNV-VAFSEIMQMIWKRLNDHGKNWRHVYKALILLE 60
Query: 385 HLLAYGNERFTQ 420
+L+ G+E+ Q
Sbjct: 61 YLIKTGSEKVAQ 72
>AE014297-3149|AAF55991.2| 243|Drosophila melanogaster CG31170-PA,
isoform A protein.
Length = 243
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERT---QNTNWVVVYKALITV 381
V +AT ++ P + L + T + P++ ++L +R TNW YK+L+ +
Sbjct: 32 VREATNDDPWGPTGPLMQELAYSTFSYE-TFPEVMSMLWKRMLQDNKTNWRRTYKSLLLL 90
Query: 382 HHLLAYGNER 411
++L+ G+ER
Sbjct: 91 NYLVRNGSER 100
>AE014297-3148|AAF55990.3| 633|Drosophila melanogaster CG31170-PB,
isoform B protein.
Length = 633
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERT---QNTNWVVVYKALITV 381
V +AT ++ P + L + T + P++ ++L +R TNW YK+L+ +
Sbjct: 32 VREATNDDPWGPTGPLMQELAYSTFSYE-TFPEVMSMLWKRMLQDNKTNWRRTYKSLLLL 90
Query: 382 HHLLAYGNER 411
++L+ G+ER
Sbjct: 91 NYLVRNGSER 100
>BT010115-1|AAQ22584.1| 1664|Drosophila melanogaster GH01331p
protein.
Length = 1664
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 130 VKMAGQTIND---RLLAARHSIAGQGLAKSVCKATTEEMIAPKKKH 258
+ +G+++ D ++L R S+A + +A+SV T E +APK+KH
Sbjct: 719 ISRSGESLTDSRCKVLLKRKSLAAKIVAESV---ETSEAVAPKRKH 761
>AY069824-1|AAL39969.1| 907|Drosophila melanogaster SD07276p
protein.
Length = 907
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 130 VKMAGQTIND---RLLAARHSIAGQGLAKSVCKATTEEMIAPKKKH 258
+ +G+++ D ++L R S+A + +A+SV T E +APK+KH
Sbjct: 505 ISRSGESLTDSRCKVLLKRKSLAAKIVAESV---ETSEAVAPKRKH 547
>AE014297-4778|AAN14281.1| 1121|Drosophila melanogaster CG1815-PB,
isoform B protein.
Length = 1121
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 130 VKMAGQTIND---RLLAARHSIAGQGLAKSVCKATTEEMIAPKKKH 258
+ +G+++ D ++L R S+A + +A+SV T E +APK+KH
Sbjct: 719 ISRSGESLTDSRCKVLLKRKSLAAKIVAESV---ETSEAVAPKRKH 761
>AE014297-4777|AAN14280.1| 1664|Drosophila melanogaster CG1815-PC,
isoform C protein.
Length = 1664
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 130 VKMAGQTIND---RLLAARHSIAGQGLAKSVCKATTEEMIAPKKKH 258
+ +G+++ D ++L R S+A + +A+SV T E +APK+KH
Sbjct: 719 ISRSGESLTDSRCKVLLKRKSLAAKIVAESV---ETSEAVAPKRKH 761
>AE014297-4776|AAF57177.2| 1674|Drosophila melanogaster CG1815-PA,
isoform A protein.
Length = 1674
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 130 VKMAGQTIND---RLLAARHSIAGQGLAKSVCKATTEEMIAPKKKH 258
+ +G+++ D ++L R S+A + +A+SV T E +APK+KH
Sbjct: 729 ISRSGESLTDSRCKVLLKRKSLAAKIVAESV---ETSEAVAPKRKH 771
>BT023838-1|AAZ86759.1| 455|Drosophila melanogaster LD13915p
protein.
Length = 455
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 220 ATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQ-NTN 348
A T EM++ KK+ + ++ N+ N S P++ ++L Q NTN
Sbjct: 195 ALTVEMLSAKKRKIAMAIYNHNKLNPSKPRIWDMLASAVQRNTN 238
>BT022726-1|AAY55142.1| 264|Drosophila melanogaster RH35407p
protein.
Length = 264
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 346 NWVVVYKALITVHHL-LAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSP 522
NWV+ +T + + YG+ R + T NNF G +AG IG +P
Sbjct: 73 NWVLTAAHCLTTDSVTIHYGSNR--AWNGQLQHTVNKNNFFRHPGYPNSAGHDIGLIRTP 130
Query: 523 FIRRYAKYLNEKAL 564
++ + +N+ +L
Sbjct: 131 YV-SFTNLINKVSL 143
>AY047512-1|AAK77244.1| 206|Drosophila melanogaster GH01822p
protein.
Length = 206
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 346 NWVVVYKALITVHHL-LAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSP 522
NWV+ +T + + YG+ R + T NNF G +AG IG +P
Sbjct: 15 NWVLTAAHCLTTDSVTIHYGSNR--AWNGQLQHTVNKNNFFRHPGYPNSAGHDIGLIRTP 72
Query: 523 FIRRYAKYLNEKAL 564
++ + +N+ +L
Sbjct: 73 YV-SFTNLINKVSL 85
>AE014296-1701|AAF50233.1| 259|Drosophila melanogaster CG8329-PA
protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 346 NWVVVYKALITVHHL-LAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSP 522
NWV+ +T + + YG+ R + T NNF G +AG IG +P
Sbjct: 68 NWVLTAAHCLTTDSVTIHYGSNR--AWNGQLQHTVNKNNFFRHPGYPNSAGHDIGLIRTP 125
Query: 523 FIRRYAKYLNEKAL 564
++ + +N+ +L
Sbjct: 126 YV-SFTNLINKVSL 138
>AE013599-2015|AAF58167.1| 441|Drosophila melanogaster CG8090-PA
protein.
Length = 441
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 220 ATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQ-NTN 348
A T EM++ KK+ + ++ N+ N S P++ ++L Q NTN
Sbjct: 181 ALTVEMLSAKKRKIAMAIYNHNKLNPSKPRIWDMLASAVQRNTN 224
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,654,094
Number of Sequences: 53049
Number of extensions: 541802
Number of successful extensions: 1088
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -