Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m03f
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 232 2e-61
U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 232 2e-61
U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated ... 232 2e-61
U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated ... 232 2e-61
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 232 2e-61
U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated ... 232 2e-61
AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like ad... 232 2e-61
AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like ad... 232 2e-61
AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like ad... 232 2e-61
AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like ad... 232 2e-61
AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 232 2e-61
Z69885-2|CAC35825.1| 469|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z69885-1|CAC35824.1| 467|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 29 2.6
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 29 3.4
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 29 3.4
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 28 4.5
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 28 4.5
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 28 4.5
AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical... 28 5.9
Z50795-4|CAA90666.1| 529|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated
protein 11, isoform a protein.
Length = 586
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated
protein 11, isoform h protein.
Length = 548
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated
protein 11, isoform b protein.
Length = 546
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated
protein 11, isoform e protein.
Length = 467
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 456
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 535
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 546
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 548
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 586
Score = 232 bits (567), Expect = 2e-61
Identities = 106/154 (68%), Positives = 126/154 (81%)
Frame = +1
Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77
Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G
Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132
Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
GYDMS +RRYAKY+ EK +YR AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165
>Z69885-2|CAC35825.1| 469|Caenorhabditis elegans Hypothetical
protein T04C10.2b protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT--NWVVVYKALITVH 384
V +AT+ + P + + T+ P ++ ++ +++ +R ++ NW VYK+L+ +
Sbjct: 24 VREATSNDPWGPSTALMSEIADLTHNP-MAFTEIMSIVWKRLNDSGKNWRHVYKSLVLLD 82
Query: 385 HLLAYGNERFTQ 420
L+ G+E+ Q
Sbjct: 83 FLIKCGHEKVAQ 94
>Z69885-1|CAC35824.1| 467|Caenorhabditis elegans Hypothetical
protein T04C10.2a protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT--NWVVVYKALITVH 384
V +AT+ + P + + T+ P ++ ++ +++ +R ++ NW VYK+L+ +
Sbjct: 24 VREATSNDPWGPSTALMSEIADLTHNP-MAFTEIMSIVWKRLNDSGKNWRHVYKSLVLLD 82
Query: 385 HLLAYGNERFTQ 420
L+ G+E+ Q
Sbjct: 83 FLIKCGHEKVAQ 94
>Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical
protein C34E11.1 protein.
Length = 483
Score = 30.7 bits (66), Expect = 0.84
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 292 NVSIPQLANLLVERTQNTNWVVVYKALITVHHLLAYGNERFTQ 420
NV P +L E ++ W VYK+LI + +LL G+ERF Q
Sbjct: 79 NVYTPLFQRML-ENNKDA-WRRVYKSLILLDYLLKNGSERFVQ 119
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = -1
Query: 338 WVRSTSKLASCGIDTLGSFVQCTR*SKCFFFGAIISSVVALQTDFANPCPAMLCRAANSL 159
++R S+ + LGSF +C + FF ++ + + PC CR N +
Sbjct: 615 YIRMVSETTYQDLGALGSFEKCPKCKSAVFFDEVVEGNDKKTQNRSCPCGYSWCRQCNKV 674
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 497 RGSDMTCLRSSGATLNTSMRRRFHTGLSPLTSARS 601
RG+D + +S T NTSMRR G S S RS
Sbjct: 113 RGADCSTTSASALTSNTSMRRDRLVGTSNFGSQRS 147
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 497 RGSDMTCLRSSGATLNTSMRRRFHTGLSPLTSARS 601
RG+D + +S T NTSMRR G S S RS
Sbjct: 601 RGADCSTTSASALTSNTSMRRDRLVGTSNFGSQRS 635
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/55 (32%), Positives = 21/55 (38%)
Frame = +3
Query: 132 ENGGSDNKR*AVSSPTQHRRAGISKVRLQSDYRRNDSAEKETFRLSSTLHKRA*R 296
EN D K SS HRR K R QS + R +T HK + R
Sbjct: 211 ENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRR 265
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/55 (32%), Positives = 21/55 (38%)
Frame = +3
Query: 132 ENGGSDNKR*AVSSPTQHRRAGISKVRLQSDYRRNDSAEKETFRLSSTLHKRA*R 296
EN D K SS HRR K R QS + R +T HK + R
Sbjct: 346 ENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRR 400
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/55 (32%), Positives = 21/55 (38%)
Frame = +3
Query: 132 ENGGSDNKR*AVSSPTQHRRAGISKVRLQSDYRRNDSAEKETFRLSSTLHKRA*R 296
EN D K SS HRR K R QS + R +T HK + R
Sbjct: 391 ENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRR 445
>AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical
protein C35E7.3 protein.
Length = 492
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 143 PAIFTLCIKKNNLHVYTALFSGVFRLNSQNYDDD 42
P ++C+K NN+ V + F F+L++ +D +
Sbjct: 133 PKYSSICVKTNNMAVISRTFPENFKLDAYTFDPE 166
>Z50795-4|CAA90666.1| 529|Caenorhabditis elegans Hypothetical
protein R166.4 protein.
Length = 529
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 600 DLAEVKGDSPV*KRLLIEVFSVAPDERRHVISDPRTGRSLYS 475
D + + G P+ + LL+ S +PD +I DPRTG S +S
Sbjct: 7 DTSRIAGTQPL-EMLLVS--SGSPDPHSTIIIDPRTGVSSWS 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,030,661
Number of Sequences: 27780
Number of extensions: 279151
Number of successful extensions: 762
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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