BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10m03f (605 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 232 2e-61 U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 232 2e-61 U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated ... 232 2e-61 U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated ... 232 2e-61 U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 232 2e-61 U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated ... 232 2e-61 AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like ad... 232 2e-61 AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like ad... 232 2e-61 AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like ad... 232 2e-61 AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like ad... 232 2e-61 AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 232 2e-61 Z69885-2|CAC35825.1| 469|Caenorhabditis elegans Hypothetical pr... 31 0.84 Z69885-1|CAC35824.1| 467|Caenorhabditis elegans Hypothetical pr... 31 0.84 Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical pr... 31 0.84 AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 29 2.6 AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 29 3.4 AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 29 3.4 AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 28 4.5 AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 28 4.5 AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 28 4.5 AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical... 28 5.9 Z50795-4|CAA90666.1| 529|Caenorhabditis elegans Hypothetical pr... 27 7.9 >U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated protein 11, isoform c protein. Length = 657 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated protein 11, isoform a protein. Length = 586 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated protein 11, isoform h protein. Length = 548 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated protein 11, isoform b protein. Length = 546 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated protein 11, isoform d protein. Length = 534 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated protein 11, isoform e protein. Length = 467 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like adaptor protein protein. Length = 456 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like adaptor protein protein. Length = 535 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like adaptor protein protein. Length = 546 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like adaptor protein protein. Length = 548 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like adaptor protein protein. Length = 586 Score = 232 bits (567), Expect = 2e-61 Identities = 106/154 (68%), Positives = 126/154 (81%) Frame = +1 Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321 GQTI+DRL AA+HS+AG L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL Sbjct: 18 GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77 Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501 L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L F+DK G G Sbjct: 78 LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132 Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603 GYDMS +RRYAKY+ EK +YR AFDFCKVK Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165 >Z69885-2|CAC35825.1| 469|Caenorhabditis elegans Hypothetical protein T04C10.2b protein. Length = 469 Score = 30.7 bits (66), Expect = 0.84 Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = +1 Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT--NWVVVYKALITVH 384 V +AT+ + P + + T+ P ++ ++ +++ +R ++ NW VYK+L+ + Sbjct: 24 VREATSNDPWGPSTALMSEIADLTHNP-MAFTEIMSIVWKRLNDSGKNWRHVYKSLVLLD 82 Query: 385 HLLAYGNERFTQ 420 L+ G+E+ Q Sbjct: 83 FLIKCGHEKVAQ 94 >Z69885-1|CAC35824.1| 467|Caenorhabditis elegans Hypothetical protein T04C10.2a protein. Length = 467 Score = 30.7 bits (66), Expect = 0.84 Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = +1 Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT--NWVVVYKALITVH 384 V +AT+ + P + + T+ P ++ ++ +++ +R ++ NW VYK+L+ + Sbjct: 24 VREATSNDPWGPSTALMSEIADLTHNP-MAFTEIMSIVWKRLNDSGKNWRHVYKSLVLLD 82 Query: 385 HLLAYGNERFTQ 420 L+ G+E+ Q Sbjct: 83 FLIKCGHEKVAQ 94 >Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical protein C34E11.1 protein. Length = 483 Score = 30.7 bits (66), Expect = 0.84 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +1 Query: 292 NVSIPQLANLLVERTQNTNWVVVYKALITVHHLLAYGNERFTQ 420 NV P +L E ++ W VYK+LI + +LL G+ERF Q Sbjct: 79 NVYTPLFQRML-ENNKDA-WRRVYKSLILLDYLLKNGSERFVQ 119 >AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical protein F14F9.4 protein. Length = 918 Score = 29.1 bits (62), Expect = 2.6 Identities = 14/60 (23%), Positives = 25/60 (41%) Frame = -1 Query: 338 WVRSTSKLASCGIDTLGSFVQCTR*SKCFFFGAIISSVVALQTDFANPCPAMLCRAANSL 159 ++R S+ + LGSF +C + FF ++ + + PC CR N + Sbjct: 615 YIRMVSETTYQDLGALGSFEKCPKCKSAVFFDEVVEGNDKKTQNRSCPCGYSWCRQCNKV 674 >AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily assigned gene nameprotein 218, isoform b protein. Length = 648 Score = 28.7 bits (61), Expect = 3.4 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +2 Query: 497 RGSDMTCLRSSGATLNTSMRRRFHTGLSPLTSARS 601 RG+D + +S T NTSMRR G S S RS Sbjct: 113 RGADCSTTSASALTSNTSMRRDRLVGTSNFGSQRS 147 >AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily assigned gene nameprotein 218, isoform a protein. Length = 1136 Score = 28.7 bits (61), Expect = 3.4 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +2 Query: 497 RGSDMTCLRSSGATLNTSMRRRFHTGLSPLTSARS 601 RG+D + +S T NTSMRR G S S RS Sbjct: 601 RGADCSTTSASALTSNTSMRRDRLVGTSNFGSQRS 635 >AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical protein Y73B6BL.5c protein. Length = 391 Score = 28.3 bits (60), Expect = 4.5 Identities = 18/55 (32%), Positives = 21/55 (38%) Frame = +3 Query: 132 ENGGSDNKR*AVSSPTQHRRAGISKVRLQSDYRRNDSAEKETFRLSSTLHKRA*R 296 EN D K SS HRR K R QS + R +T HK + R Sbjct: 211 ENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRR 265 >AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical protein Y73B6BL.5b protein. Length = 526 Score = 28.3 bits (60), Expect = 4.5 Identities = 18/55 (32%), Positives = 21/55 (38%) Frame = +3 Query: 132 ENGGSDNKR*AVSSPTQHRRAGISKVRLQSDYRRNDSAEKETFRLSSTLHKRA*R 296 EN D K SS HRR K R QS + R +T HK + R Sbjct: 346 ENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRR 400 >AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical protein Y73B6BL.5a protein. Length = 571 Score = 28.3 bits (60), Expect = 4.5 Identities = 18/55 (32%), Positives = 21/55 (38%) Frame = +3 Query: 132 ENGGSDNKR*AVSSPTQHRRAGISKVRLQSDYRRNDSAEKETFRLSSTLHKRA*R 296 EN D K SS HRR K R QS + R +T HK + R Sbjct: 391 ENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRR 445 >AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical protein C35E7.3 protein. Length = 492 Score = 27.9 bits (59), Expect = 5.9 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = -1 Query: 143 PAIFTLCIKKNNLHVYTALFSGVFRLNSQNYDDD 42 P ++C+K NN+ V + F F+L++ +D + Sbjct: 133 PKYSSICVKTNNMAVISRTFPENFKLDAYTFDPE 166 >Z50795-4|CAA90666.1| 529|Caenorhabditis elegans Hypothetical protein R166.4 protein. Length = 529 Score = 27.5 bits (58), Expect = 7.9 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -3 Query: 600 DLAEVKGDSPV*KRLLIEVFSVAPDERRHVISDPRTGRSLYS 475 D + + G P+ + LL+ S +PD +I DPRTG S +S Sbjct: 7 DTSRIAGTQPL-EMLLVS--SGSPDPHSTIIIDPRTGVSSWS 45 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,030,661 Number of Sequences: 27780 Number of extensions: 279151 Number of successful extensions: 762 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 734 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 751 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1300523034 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -