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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10m03f
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88308-17|AAK68214.1|  657|Caenorhabditis elegans Uncoordinated ...   232   2e-61
U88308-16|AAK68212.1|  586|Caenorhabditis elegans Uncoordinated ...   232   2e-61
U88308-15|AAK68218.1|  548|Caenorhabditis elegans Uncoordinated ...   232   2e-61
U88308-14|AAK68213.1|  546|Caenorhabditis elegans Uncoordinated ...   232   2e-61
U88308-13|AAK68215.1|  534|Caenorhabditis elegans Uncoordinated ...   232   2e-61
U88308-12|AAK68216.1|  467|Caenorhabditis elegans Uncoordinated ...   232   2e-61
AF144261-1|AAD37369.1|  456|Caenorhabditis elegans AP180-like ad...   232   2e-61
AF144260-1|AAD37368.1|  535|Caenorhabditis elegans AP180-like ad...   232   2e-61
AF144259-1|AAD37367.1|  546|Caenorhabditis elegans AP180-like ad...   232   2e-61
AF144258-1|AAD37366.1|  548|Caenorhabditis elegans AP180-like ad...   232   2e-61
AF144257-1|AAD37365.1|  586|Caenorhabditis elegans AP180-like ad...   232   2e-61
Z69885-2|CAC35825.1|  469|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z69885-1|CAC35824.1|  467|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z67754-1|CAA91751.1|  483|Caenorhabditis elegans Hypothetical pr...    31   0.84 
AF024492-3|AAF98619.1|  918|Caenorhabditis elegans Hypothetical ...    29   2.6  
AF077534-2|AAC26284.1|  648|Caenorhabditis elegans Temporarily a...    29   3.4  
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a...    29   3.4  
AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical...    28   4.5  
AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical...    28   4.5  
AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical...    28   4.5  
AF067216-10|AAC17519.1|  492|Caenorhabditis elegans Hypothetical...    28   5.9  
Z50795-4|CAA90666.1|  529|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>U88308-17|AAK68214.1|  657|Caenorhabditis elegans Uncoordinated
           protein 11, isoform c protein.
          Length = 657

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>U88308-16|AAK68212.1|  586|Caenorhabditis elegans Uncoordinated
           protein 11, isoform a protein.
          Length = 586

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>U88308-15|AAK68218.1|  548|Caenorhabditis elegans Uncoordinated
           protein 11, isoform h protein.
          Length = 548

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>U88308-14|AAK68213.1|  546|Caenorhabditis elegans Uncoordinated
           protein 11, isoform b protein.
          Length = 546

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>U88308-13|AAK68215.1|  534|Caenorhabditis elegans Uncoordinated
           protein 11, isoform d protein.
          Length = 534

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>U88308-12|AAK68216.1|  467|Caenorhabditis elegans Uncoordinated
           protein 11, isoform e protein.
          Length = 467

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>AF144261-1|AAD37369.1|  456|Caenorhabditis elegans AP180-like
           adaptor protein protein.
          Length = 456

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>AF144260-1|AAD37368.1|  535|Caenorhabditis elegans AP180-like
           adaptor protein protein.
          Length = 535

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>AF144259-1|AAD37367.1|  546|Caenorhabditis elegans AP180-like
           adaptor protein protein.
          Length = 546

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>AF144258-1|AAD37366.1|  548|Caenorhabditis elegans AP180-like
           adaptor protein protein.
          Length = 548

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>AF144257-1|AAD37365.1|  586|Caenorhabditis elegans AP180-like
           adaptor protein protein.
          Length = 586

 Score =  232 bits (567), Expect = 2e-61
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = +1

Query: 142 GQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANL 321
           GQTI+DRL AA+HS+AG  L K++CKATTEE++APKKKHLDYL+HCTNEPNVSIP +ANL
Sbjct: 18  GQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANL 77

Query: 322 LVERTQNTNWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGAR 501
           L+ERTQN NW VVYKALIT+H+++ YGNERF+QYLAS N+TF L  F+DK G  G     
Sbjct: 78  LIERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDKVGGAG----- 132

Query: 502 IGYDMSPFIRRYAKYLNEKALSYRTVAFDFCKVK 603
            GYDMS  +RRYAKY+ EK  +YR  AFDFCKVK
Sbjct: 133 -GYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVK 165


>Z69885-2|CAC35825.1|  469|Caenorhabditis elegans Hypothetical
           protein T04C10.2b protein.
          Length = 469

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +1

Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT--NWVVVYKALITVH 384
           V +AT+ +   P    +  +   T+ P ++  ++ +++ +R  ++  NW  VYK+L+ + 
Sbjct: 24  VREATSNDPWGPSTALMSEIADLTHNP-MAFTEIMSIVWKRLNDSGKNWRHVYKSLVLLD 82

Query: 385 HLLAYGNERFTQ 420
            L+  G+E+  Q
Sbjct: 83  FLIKCGHEKVAQ 94


>Z69885-1|CAC35824.1|  467|Caenorhabditis elegans Hypothetical
           protein T04C10.2a protein.
          Length = 467

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +1

Query: 211 VCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT--NWVVVYKALITVH 384
           V +AT+ +   P    +  +   T+ P ++  ++ +++ +R  ++  NW  VYK+L+ + 
Sbjct: 24  VREATSNDPWGPSTALMSEIADLTHNP-MAFTEIMSIVWKRLNDSGKNWRHVYKSLVLLD 82

Query: 385 HLLAYGNERFTQ 420
            L+  G+E+  Q
Sbjct: 83  FLIKCGHEKVAQ 94


>Z67754-1|CAA91751.1|  483|Caenorhabditis elegans Hypothetical
           protein C34E11.1 protein.
          Length = 483

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +1

Query: 292 NVSIPQLANLLVERTQNTNWVVVYKALITVHHLLAYGNERFTQ 420
           NV  P    +L E  ++  W  VYK+LI + +LL  G+ERF Q
Sbjct: 79  NVYTPLFQRML-ENNKDA-WRRVYKSLILLDYLLKNGSERFVQ 119


>AF024492-3|AAF98619.1|  918|Caenorhabditis elegans Hypothetical
           protein F14F9.4 protein.
          Length = 918

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/60 (23%), Positives = 25/60 (41%)
 Frame = -1

Query: 338 WVRSTSKLASCGIDTLGSFVQCTR*SKCFFFGAIISSVVALQTDFANPCPAMLCRAANSL 159
           ++R  S+     +  LGSF +C +     FF  ++        + + PC    CR  N +
Sbjct: 615 YIRMVSETTYQDLGALGSFEKCPKCKSAVFFDEVVEGNDKKTQNRSCPCGYSWCRQCNKV 674


>AF077534-2|AAC26284.1|  648|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 218, isoform b protein.
          Length = 648

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 497 RGSDMTCLRSSGATLNTSMRRRFHTGLSPLTSARS 601
           RG+D +   +S  T NTSMRR    G S   S RS
Sbjct: 113 RGADCSTTSASALTSNTSMRRDRLVGTSNFGSQRS 147


>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 218, isoform a protein.
          Length = 1136

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 497 RGSDMTCLRSSGATLNTSMRRRFHTGLSPLTSARS 601
           RG+D +   +S  T NTSMRR    G S   S RS
Sbjct: 601 RGADCSTTSASALTSNTSMRRDRLVGTSNFGSQRS 635


>AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5c protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = +3

Query: 132 ENGGSDNKR*AVSSPTQHRRAGISKVRLQSDYRRNDSAEKETFRLSSTLHKRA*R 296
           EN   D K    SS   HRR    K R QS     +       R  +T HK + R
Sbjct: 211 ENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRR 265


>AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5b protein.
          Length = 526

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = +3

Query: 132 ENGGSDNKR*AVSSPTQHRRAGISKVRLQSDYRRNDSAEKETFRLSSTLHKRA*R 296
           EN   D K    SS   HRR    K R QS     +       R  +T HK + R
Sbjct: 346 ENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRR 400


>AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5a protein.
          Length = 571

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = +3

Query: 132 ENGGSDNKR*AVSSPTQHRRAGISKVRLQSDYRRNDSAEKETFRLSSTLHKRA*R 296
           EN   D K    SS   HRR    K R QS     +       R  +T HK + R
Sbjct: 391 ENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRR 445


>AF067216-10|AAC17519.1|  492|Caenorhabditis elegans Hypothetical
           protein C35E7.3 protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -1

Query: 143 PAIFTLCIKKNNLHVYTALFSGVFRLNSQNYDDD 42
           P   ++C+K NN+ V +  F   F+L++  +D +
Sbjct: 133 PKYSSICVKTNNMAVISRTFPENFKLDAYTFDPE 166


>Z50795-4|CAA90666.1|  529|Caenorhabditis elegans Hypothetical
           protein R166.4 protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 600 DLAEVKGDSPV*KRLLIEVFSVAPDERRHVISDPRTGRSLYS 475
           D + + G  P+ + LL+   S +PD    +I DPRTG S +S
Sbjct: 7   DTSRIAGTQPL-EMLLVS--SGSPDPHSTIIIDPRTGVSSWS 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,030,661
Number of Sequences: 27780
Number of extensions: 279151
Number of successful extensions: 762
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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