BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10m03f (605 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 1.8 DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.3 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.3 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.3 DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.3 AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 4.1 AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.1 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 4.1 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 23.4 bits (48), Expect = 1.8 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +2 Query: 56 FVNLIEKHLKIVPYKRVN 109 FVN I + K VP K+VN Sbjct: 314 FVNTIYRRKKTVPLKKVN 331 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 23.0 bits (47), Expect = 2.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 Query: 490 PLLVLRFCLGNYLVGTLNYSM 428 PL+ + F L Y GT+NY M Sbjct: 158 PLIPVHFALRIYRNGTVNYLM 178 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 23.0 bits (47), Expect = 2.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 Query: 490 PLLVLRFCLGNYLVGTLNYSM 428 PL+ + F L Y GT+NY M Sbjct: 158 PLIPVHFALRIYRNGTVNYLM 178 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 23.0 bits (47), Expect = 2.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 Query: 490 PLLVLRFCLGNYLVGTLNYSM 428 PL+ + F L Y GT+NY M Sbjct: 209 PLIPVHFALRIYRNGTVNYLM 229 >DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride channel protein. Length = 458 Score = 23.0 bits (47), Expect = 2.3 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -2 Query: 490 PLLVLRFCLGNYLVGTLNYSM 428 PL+ + F L Y GT+NY M Sbjct: 158 PLIPVHFALRIYRNGTVNYLM 178 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 22.2 bits (45), Expect = 4.1 Identities = 6/21 (28%), Positives = 15/21 (71%) Frame = -2 Query: 409 SHSRKRVDDERLSALYKRQPN 347 + ++ +++E+L+ +YK PN Sbjct: 439 NEEKRTIENEQLNRMYKSYPN 459 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 22.2 bits (45), Expect = 4.1 Identities = 8/24 (33%), Positives = 14/24 (58%) Frame = +1 Query: 397 YGNERFTQYLASSNSTFQLNNFLD 468 + ++FTQY+ S+S Q +D Sbjct: 390 HNTQQFTQYIPESSSNLQEKTKID 413 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 22.2 bits (45), Expect = 4.1 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +3 Query: 225 YRRNDSAEKETFRLSSTLHKRA*RVDTAAG 314 +RRN + K R + +LHK RV+ G Sbjct: 541 FRRNAATWKNAVRHNLSLHKCFMRVENVKG 570 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 171,306 Number of Sequences: 438 Number of extensions: 3579 Number of successful extensions: 8 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17848938 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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