Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10m03f
(605 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 60 8e-10
At1g14910.1 68414.m01782 epsin N-terminal homology (ENTH) domain... 58 3e-09
At2g01600.1 68415.m00084 epsin N-terminal homology (ENTH) domain... 56 1e-08
At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH) domain... 47 1e-05
At2g25430.1 68415.m03046 epsin N-terminal homology (ENTH) domain... 45 4e-05
At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH) domain... 44 8e-05
At4g32285.1 68417.m04593 epsin N-terminal homology (ENTH) domain... 43 1e-04
At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH) domain... 37 0.009
At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH) domain... 35 0.036
At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH) domain... 35 0.036
At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH) domain... 35 0.036
At5g49810.1 68418.m06169 methionine S-methyltransferase identica... 31 0.45
At3g46540.1 68416.m05052 epsin N-terminal homology (ENTH) domain... 31 0.59
At5g11710.1 68418.m01368 epsin N-terminal homology (ENTH) domain... 30 1.4
At5g53460.1 68418.m06644 glutamate synthase [NADH], chloroplast,... 29 3.2
At5g22500.1 68418.m02626 acyl CoA reductase, putative / male-ste... 28 4.2
At1g25240.1 68414.m03132 epsin N-terminal homology (ENTH) domain... 28 4.2
At1g05020.1 68414.m00503 epsin N-terminal homology (ENTH) domain... 28 5.5
At4g24220.1 68417.m03476 expressed protein protein induced upon ... 27 7.3
At3g02420.1 68416.m00229 expressed protein 27 7.3
At1g57980.1 68414.m06570 purine permease-related low similarity ... 27 9.6
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 60.5 bits (140), Expect = 8e-10
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTN--EPNVSIPQLANLLVERTQNT-NWVVVYKALIT 378
++ KAT APK++H+ + T+ +P + + L +R T NWVV K LI
Sbjct: 35 AIVKATNHVESAPKERHIRRIFSATSVVQPRADVAYCIHALAKRLSKTRNWVVAIKVLIV 94
Query: 379 VHHLLAYGNERFTQYL---ASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYL 549
+H L G+ F + L + +++NF D + + + +D S +IR YA +L
Sbjct: 95 IHRTLREGDPTFREELLNYSHRGHILRISNFKDDT-------SPLAWDCSAWIRTYALFL 147
Query: 550 NEKALSYRTVAFD 588
E+ YR + +D
Sbjct: 148 EERLECYRVLKYD 160
>At1g14910.1 68414.m01782 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain A, Calm-N N-Terminal Domain Of Clathrin
Assembly Lymphoid Myeloid Leukaemia Protein, Pi(4,5)p2
Complex (GP:13399999) {Homo sapiens}
Length = 692
Score = 58.4 bits (135), Expect = 3e-09
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTN--EPNVSIPQLANLLVERTQNT-NWVVVYKALIT 378
++ KAT PK +HL + T+ P + + L R T NW V KAL+
Sbjct: 35 AIVKATNHVECPPKDRHLRKIFLATSAIRPRADVAYCIHALSRRLHKTRNWTVALKALLV 94
Query: 379 VHHLLAYGNERFTQYL---ASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYL 549
+H LL G+ F + L + Q++NF D S + + +D S ++R YA +L
Sbjct: 95 IHRLLRDGDPTFREELLNFSQKGRIMQISNFKDDS-------SPVAWDCSGWVRTYALFL 147
Query: 550 NEKALSYRTVAFD 588
E+ +R + +D
Sbjct: 148 EERLECFRVLKYD 160
>At2g01600.1 68415.m00084 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to clathrin assembly protein AP180 (GI:6492344) [Xenopus
laevis]
Length = 571
Score = 56.4 bits (130), Expect = 1e-08
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTN--EPNVSIPQLANLLVERTQNT-NWVVVYKALIT 378
++ KAT PK +HL + T+ + + L R T NW V K LI
Sbjct: 35 AIVKATNHVECPPKDRHLRKIFAATSVTRARADVAYCIHALSRRLHKTRNWTVALKTLIV 94
Query: 379 VHHLLAYGNERFTQYL---ASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYL 549
+H LL G+ F + L + QL+NF D S + I +D S ++R YA +L
Sbjct: 95 IHRLLREGDPTFREELLNFSQRGRILQLSNFKDDS-------SPIAWDCSAWVRTYALFL 147
Query: 550 NEKALSYRTVAFD 588
E+ +R + +D
Sbjct: 148 EERLECFRVLKYD 160
>At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to CLATHRIN
COAT ASSEMBLY PROTEIN AP180 - Mus musculus,
SWISSPROT:Q61548
Length = 599
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNTN-WVVVYKALITVH 384
++ KAT E ++K++ ++ T+ I + L R T W V K LI +
Sbjct: 37 AIVKATRHEEFPAEEKYIREILSLTSYSRSYINACVSTLSRRLNKTKCWTVALKTLILIQ 96
Query: 385 HLLAYGNERFTQ--YLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNEK 558
LL G++ + Q + A+ T +L N D V + +D S F+R YA YL+E+
Sbjct: 97 RLLGEGDQAYEQEIFFATRRGT-RLLNMSDFRDVSRSNS----WDYSAFVRTYALYLDER 151
Query: 559 ALSYRTVA 582
L +R A
Sbjct: 152 -LDFRMQA 158
>At2g25430.1 68415.m03046 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain;
Length = 653
Score = 44.8 bits (101), Expect = 4e-05
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +1
Query: 199 LAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT-NWVVVYKALI 375
L ++ KAT+ + +K++ +++ T+ I + R T +WVV KAL+
Sbjct: 31 LEVAIVKATSHDDDPASEKYIREILNLTSLSRGYILACVTSVSRRLSKTRDWVVALKALM 90
Query: 376 TVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNE 555
VH LL G+ F + + ST + L+ S + A + +D S F+R YA YL++
Sbjct: 91 LVHRLLNEGDPIFQEEIL--YSTRRGTRMLNMSDFRDEAHSS-SWDHSAFVRTYAGYLDQ 147
Query: 556 K 558
+
Sbjct: 148 R 148
>At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to Chain A,
Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid
Myeloid Leukaemia Protein, Pi(4,5)p2 Complex
(GP:13399999) {Homo sapiens}; supporting cDNA
gi|26451912|dbj|AK118440.1|
Length = 611
Score = 44.0 bits (99), Expect = 8e-05
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 208 SVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT-NWVVVYKALITVH 384
+V KAT + + K++ ++ T+ + L R T NW V K LI +
Sbjct: 37 AVVKATRHDDYPAEDKYIREILCLTSYSRNYVSACVATLSRRLNKTKNWSVALKTLILIQ 96
Query: 385 HLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNEKAL 564
LL G+ + Q + + T + L+ S + A+ + +D S F+R YA YL+E+ L
Sbjct: 97 RLLTDGDRAYEQEIFFA--TRRGTRLLNMSDFRDASQSD-SWDYSAFVRTYALYLDER-L 152
Query: 565 SYR 573
YR
Sbjct: 153 DYR 155
>At4g32285.1 68417.m04593 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related Aux22d, Vigna radiata, PID:D1021691;
contains Pfam PF01417: ENTH domain. ENTH (Epsin
N-terminal homology) domain; similar to clathrin
assembly protein AP180 (GI:6492344) [Xenopus laevis]
Length = 635
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +1
Query: 199 LAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT-NWVVVYKALI 375
L ++ KAT+ + K++ ++ T+ + + R + T +W+V KAL+
Sbjct: 31 LEVAIVKATSHDDDQSSDKYIREILSLTSLSRGYVHACVTSVSRRLKKTRDWIVALKALM 90
Query: 376 TVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLNE 555
VH LL G+ F + + +T + L+ S + A + +D S F+R YA YL++
Sbjct: 91 LVHRLLNEGDPLFQEEIL--YATRRGTRILNMSDFRDEAHSS-SWDHSAFVRTYASYLDQ 147
Query: 556 K 558
+
Sbjct: 148 R 148
>At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain;
similar to Af10-protein - Avena fatua, EMBL:U80041
Length = 1024
Score = 37.1 bits (82), Expect = 0.009
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Frame = +1
Query: 133 KMAGQTINDRLLAARHSIAG-QGLAKSVCKATTEEMIAPKKKHLDYLVHCT---NEPNVS 300
K GQT+ D + G+ + V AT+ E P L + H + +E ++
Sbjct: 3 KAFGQTVRDLKRGVNKKVLKVPGIEQKVLDATSNESWGPHGSLLADIAHASRNYHEYQIT 62
Query: 301 IPQLANLLVERTQNTNWVVVYKALITVHHLLAYGNERFTQYL---ASSNSTFQLNNFLDK 471
+ L L + NW VYKAL + +++ +G+ER + + A +T ++D
Sbjct: 63 MGVLWKRLSD--SGKNWRHVYKALTVLEYMVGHGSERVIEEVKEHAYQITTLSGFQYIDS 120
Query: 472 SGVQGAAGAR 501
SG + R
Sbjct: 121 SGKDQGSNVR 130
>At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 35.1 bits (77), Expect = 0.036
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Frame = +1
Query: 133 KMAGQTINDRLLAARHSIAG-QGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
K+ GQT+ D + G+ + V AT+ E P L L + N Q
Sbjct: 3 KVFGQTVRDLKREVNKKVLKVPGVEQKVLDATSNEPWGPHGSLLADLAQASR--NYHEYQ 60
Query: 310 LANLLV-ERTQNT--NWVVVYKALITVHHLLAYGNERFTQYL---ASSNSTFQLNNFLDK 471
L +++ +R +T NW VYKAL + +++ +G+ER + A ST ++D
Sbjct: 61 LIMVVIWKRLSDTGKNWRHVYKALTVLEYMVGHGSERVIDEIRERAYQISTLSDFQYIDS 120
Query: 472 SGVQGAAGAR 501
G + R
Sbjct: 121 GGRDQGSNVR 130
>At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 35.1 bits (77), Expect = 0.036
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Frame = +1
Query: 133 KMAGQTINDRLLAARHSIAG-QGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
K+ GQT+ D + G+ + V AT+ E P L L + N Q
Sbjct: 3 KVFGQTVRDLKREVNKKVLKVPGVEQKVLDATSNEPWGPHGSLLADLAQASR--NYHEYQ 60
Query: 310 LANLLV-ERTQNT--NWVVVYKALITVHHLLAYGNERFTQYL---ASSNSTFQLNNFLDK 471
L +++ +R +T NW VYKAL + +++ +G+ER + A ST ++D
Sbjct: 61 LIMVVIWKRLSDTGKNWRHVYKALTVLEYMVGHGSERVIDEIRERAYQISTLSDFQYIDS 120
Query: 472 SGVQGAAGAR 501
G + R
Sbjct: 121 GGRDQGSNVR 130
>At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 35.1 bits (77), Expect = 0.036
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Frame = +1
Query: 133 KMAGQTINDRLLAARHSIAG-QGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
K+ GQT+ D + G+ + V AT+ E P L L + N Q
Sbjct: 3 KVFGQTVRDLKREVNKKVLKVPGVEQKVLDATSNEPWGPHGSLLADLAQASR--NYHEYQ 60
Query: 310 LANLLV-ERTQNT--NWVVVYKALITVHHLLAYGNERFTQYL---ASSNSTFQLNNFLDK 471
L +++ +R +T NW VYKAL + +++ +G+ER + A ST ++D
Sbjct: 61 LIMVVIWKRLSDTGKNWRHVYKALTVLEYMVGHGSERVIDEIRERAYQISTLSDFQYIDS 120
Query: 472 SGVQGAAGAR 501
G + R
Sbjct: 121 GGRDQGSNVR 130
>At5g49810.1 68418.m06169 methionine S-methyltransferase identical to
methionine S-methyltransferase [Arabidopsis thaliana]
GI:5733429
Length = 1071
Score = 31.5 bits (68), Expect = 0.45
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = +1
Query: 130 VKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQ 309
+K+ ++ L+ A H++ G S K ++M+A K++ + +E ++
Sbjct: 906 IKLGFLVLDQSLIDAFHTLPGLSKPHSTVKYAAKKMLALKEEKASDFLDAVSETIKTLEG 965
Query: 310 LANLLVERTQNTNWVVV 360
+ L E QN+ W V+
Sbjct: 966 RSRRLKEVLQNSGWEVI 982
>At3g46540.1 68416.m05052 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to Chain A
Of The Epsin N-Terminal Homology (Enth) Domain
(GI:8569264) [Rattus Norvegicus]; similar to
Af10-protein (GI:1724114) [Avena fatua]
Length = 307
Score = 31.1 bits (67), Expect = 0.59
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 286 EPNVSIPQLANLLVERTQNTNWVVVYKALITVHHLLAYGNERFT-QYLASSNSTFQLNNF 462
E ++I ++ + + + NW + Y +LI V HLL +G E + ++ + Q+ F
Sbjct: 77 EDYLAIVEVLHKRLAKFDKRNWRMAYNSLIVVEHLLTHGPESVSDEFQGDIDVISQMQTF 136
Query: 463 --LDKSGVQGAAGAR 501
+D+ G R
Sbjct: 137 QQIDEKGFNWGLAVR 151
>At5g11710.1 68418.m01368 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to
Af10-protein (GI:1724114) [Avena fatua]; similar to
clathrin assembly protein AP180 (GI:6492344) [Xenopus
laevis]; Af10-protein, Avena fatua, EMBL:U80041
Length = 560
Score = 29.9 bits (64), Expect = 1.4
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = +1
Query: 199 LAKSVCKATTEEMIAPKKKHLDYLVHCTNEPNVSIPQLANLLVERTQNT--NWVVVYKAL 372
+ + V AT E P L + T + + + ++L R T +W VYKAL
Sbjct: 28 MEQKVLDATDNEPWGPHGTALAEIAQATKKFS-ECQMVMSVLWTRLSETGKDWRYVYKAL 86
Query: 373 ITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPFIRRYAKYLN 552
+ +L++ G+ER + T+Q+++ V+ G +G ++ LN
Sbjct: 87 AVIDYLISNGSERAVDEII--EHTYQISSLTSFEYVE-PNGKDVGINVRKKAENIVALLN 143
Query: 553 EK 558
K
Sbjct: 144 NK 145
>At5g53460.1 68418.m06644 glutamate synthase [NADH], chloroplast,
putative similar to SP|Q03460 Glutamate synthase [NADH],
chloroplast precursor (EC 1.4.1.14) (NADH- GOGAT)
{Medicago sativa}
Length = 2208
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = +1
Query: 355 VVYKALITVHHLLAY-----GNERFTQYLASSNSTFQLNNF 462
+VYK + L Y G+ERFT Y+A +S F N F
Sbjct: 298 IVYKGQLKPDQLKDYYYADLGSERFTSYMALVHSRFSTNTF 338
>At5g22500.1 68418.m02626 acyl CoA reductase, putative /
male-sterility protein, putative similar to acyl CoA
reductase [Simmondsia chinensis] GI:5020215; contains
Pfam profile PF03015: Male sterility protein; identical
to cDNA male sterility 2-like protein GI:1491614
Length = 491
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 349 WVVVYKALITVHHLLAYGNERFTQYLASSNSTFQL 453
W+ K L +V ++AYG R +LA SNS F L
Sbjct: 274 WIEGLKTLDSV--IVAYGKGRLKCFLADSNSVFDL 306
>At1g25240.1 68414.m03132 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to clathrin
assembly protein AP180 (GI:6492344) [Xenopus laevis]
Length = 376
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 298 SIPQLANLLVERTQNT-NWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKS 474
++ L + L R T +W+V KAL+ VH +L + T F L++F D
Sbjct: 66 NLKPLVHALSSRVNRTRSWIVALKALMLVHGVLCC---KVTSLQEIRRLPFDLSDFSD-- 120
Query: 475 GVQGAAGARIGYDMSPFIRRYAKYLNE 555
G + + + FIR Y +L++
Sbjct: 121 ---GHSRPSKTWGFNAFIRAYFSFLDQ 144
>At1g05020.1 68414.m00503 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related Similar to clathrin assembly protein
gb|X68878 (AP180) from Rattus norvegicus; contains Pfam
PF01417: ENTH domain. ENTH (Epsin N-terminal homology)
domain; EST gb|W43552 comes from this gene
Length = 653
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +1
Query: 346 NWVVVYKALITVHHLLAYGNERFTQYLASSNSTFQLNNFLDKSGVQGAAGARIGYDMSPF 525
NW+V K+L+ V + G+ F + + + L+ S + + + +D + F
Sbjct: 87 NWIVALKSLVLVLRIFQDGDPYFPREVLHAMKRGA--KILNLSSFRDDSNS-CPWDFTAF 143
Query: 526 IRRYAKYLNEK 558
+R +A YL+E+
Sbjct: 144 VRTFALYLDER 154
>At4g24220.1 68417.m03476 expressed protein protein induced upon
wounding - Arabidopsis thaliana, PID:e257749
Length = 388
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 145 DPPFSRYVLKKIIYTFIRHYFQVFFD*IHKIMTMTGKICHRP 20
DPPF+ + + I F + F+ I KI T+T I HRP
Sbjct: 162 DPPFTEDMPRLQIQNFYYTQEDILFEEIKKIETVTWSI-HRP 202
>At3g02420.1 68416.m00229 expressed protein
Length = 348
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 472 SGVQGAAGARIGYDMSPFIRRYAKYLN 552
+G + +RIG ++P I+RYA +LN
Sbjct: 310 AGYHQSTWSRIGRTVTPIIQRYAPFLN 336
>At1g57980.1 68414.m06570 purine permease-related low similarity to
purine permease [Arabidopsis thaliana] GI:7620007;
contains Pfam profile PF03151: Domain of unknown
function, DUF250
Length = 394
Score = 27.1 bits (57), Expect = 9.6
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +1
Query: 109 LFFLIHNVKMAGQTINDRLLAARHSIAGQGLAKSVCKATTEEMIAPKKKHLDY-LVHCTN 285
LFF+ + K +TIN R L+ R + L V A ++ A K + Y +
Sbjct: 101 LFFIFPSPKPNPETINTRFLSIRLILLYFSL--GVLVAAHSKLYALGKLYSSYGFFMLIS 158
Query: 286 EPNVSIPQLANLLVERTQNTNWVVVYKALITVHHLLAYGNERFT 417
+ + ++ R + T W+++ LI V + A+G F+
Sbjct: 159 GSQLIFTLIFTAIINRFKFTRWIIISIVLILVSY--AFGGPVFS 200
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,065,292
Number of Sequences: 28952
Number of extensions: 255618
Number of successful extensions: 635
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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