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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l24r
         (724 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch...    43   4e-05
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce...    37   0.003
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c...    36   0.008
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch...    33   0.055
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces...    32   0.072
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac...    32   0.095
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce...    32   0.095
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch...    31   0.13 
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy...    31   0.17 
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p...    31   0.22 
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch...    29   0.67 
SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyce...    29   0.67 
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos...    29   0.89 
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc...    29   0.89 
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb...    29   0.89 
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy...    28   1.2  
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    28   1.6  
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr...    28   1.6  
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac...    28   1.6  
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ...    27   2.1  
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||...    27   2.1  
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr...    27   2.1  
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc...    27   3.6  
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc...    26   4.7  
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom...    26   6.3  
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr...    26   6.3  
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F...    26   6.3  
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr...    25   8.3  
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    25   8.3  

>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 161

 Score = 43.2 bits (97), Expect = 4e-05
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
 Frame = -3

Query: 572 ERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEE-- 399
           E+++A   +  EA   AE A+ K  EV  +L++ E +            S++ ELEEE  
Sbjct: 6   EKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK 65

Query: 398 -LRVVGNNLKSLEVSEEKANQR----EEEYKNQIKTL---TTRLKXXXXXXXXXXRSVQK 243
            LR+  +N    +   E+ +++    EEE +   K L   T +++          R VQ 
Sbjct: 66  QLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQS 125

Query: 242 LQKEVDRLEDELVAEKEKYKDIGDDLD 162
           L++E D +E +L    +KY  +  +LD
Sbjct: 126 LERERDDMEQKLEEMTDKYTKVKAELD 152


>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1957

 Score = 36.7 bits (81), Expect = 0.003
 Identities = 20/83 (24%), Positives = 40/83 (48%)
 Frame = -3

Query: 410  LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKE 231
            LE+E   + + LKSLE  ++  +   EE   ++  LT +LK          + +   Q+E
Sbjct: 897  LEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEE 956

Query: 230  VDRLEDELVAEKEKYKDIGDDLD 162
            +  L++E +++ +    +   LD
Sbjct: 957  ISNLKEENMSQSQAITSVKSKLD 979



 Score = 27.1 bits (57), Expect = 2.7
 Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
 Frame = -3

Query: 665 TATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVAR 486
           T  ++L++A       E+  K L+      +  + + +  +K+     EEA         
Sbjct: 382 TIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSLAHATG 441

Query: 485 KLAMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKA--NQREEEYKNQI 312
           KLA + ++                ++E++LR   N+  S E+ E+ A  +++++E  N  
Sbjct: 442 KLAEINSE----RDFQNKKIKDFEKIEQDLRACLNS-SSNELKEKSALIDKKDQELNN-- 494

Query: 311 KTLTTRLKXXXXXXXXXXRSVQKLQKEV 228
             L  ++K           S+Q LQ+++
Sbjct: 495 --LREQIKEQKKVSESTQSSLQSLQRDI 520


>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 566

 Score = 35.5 bits (78), Expect = 0.008
 Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
 Frame = -1

Query: 340 NAKRSTKIRSKPSPPV*RRLKHVPSS-PSVPCRNCKRRSIGLKTNLSPKRRNTRTSETIW 164
           NAK   + R   SP     L  +PSS PS   +N +   I    + S  + N R++E ++
Sbjct: 186 NAKNYEENREPMSPSPQEALPLMPSSPPSQDYQNDQNHLILYTNSESIPKLNLRSNELVY 245

Query: 163 IPPS*SSFSRNKLPLYKD---PKSECPGNT-ISPRF 68
            PPS     +  L L KD    KS+C  NT + P F
Sbjct: 246 PPPS-KDLLQKLLALEKDGQVEKSDCSKNTQLKPSF 280


>SPCC162.08c |nup211||nuclear pore complex associated
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1837

 Score = 32.7 bits (71), Expect = 0.055
 Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
 Frame = -3

Query: 653 KLSEASQAADESERARKVLENRSLADEE-RMDALENQLKEARFLAEEADKKYDEVARKLA 477
           KL + + A   S+    ++E  S      R++ L N+L+  + ++   +KK++E    L 
Sbjct: 642 KLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSLQ 701

Query: 476 MVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTT 297
           + ++++           S  +E   +L       KSL +SE   ++ +E YK+  + L +
Sbjct: 702 LEKSNIQLQLTSLTSERSLALEKLNDLE------KSLVLSERSKDELDESYKSLQEQLAS 755

Query: 296 R 294
           +
Sbjct: 756 K 756


>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1727

 Score = 32.3 bits (70), Expect = 0.072
 Identities = 19/82 (23%), Positives = 38/82 (46%)
 Frame = -3

Query: 404 EELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVD 225
           +ELR +  NL+ +   +++   +  E    + +L  RLK             ++ Q+ + 
Sbjct: 713 KELRSINQNLQDIISRQDQRASKFAEELLHVNSLAERLKGELNASKGEKDLRKRTQERLI 772

Query: 224 RLEDELVAEKEKYKDIGDDLDT 159
              D+L+AE+E+   +  DL T
Sbjct: 773 SENDKLLAERERLMSLVSDLQT 794



 Score = 28.7 bits (61), Expect = 0.89
 Identities = 19/79 (24%), Positives = 38/79 (48%)
 Frame = -3

Query: 413  ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 234
            +L+E    + N+L SL+ S EK+     EY ++IKTL    +           + Q ++ 
Sbjct: 823  KLKESNEKMSNDLHSLQKSLEKSGI---EYSSRIKTLMLEKQSLSEDNRKLLDNQQMMEI 879

Query: 233  EVDRLEDELVAEKEKYKDI 177
            ++  L   +  EK+++  +
Sbjct: 880  KLQELNGVIELEKQRFSTL 898


>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
            Cut14|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1172

 Score = 31.9 bits (69), Expect = 0.095
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
 Frame = -3

Query: 575  EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXS-------KI 417
            E+  +  +++L E   + E+++  Y+ V  +   +E +L           S       +I
Sbjct: 796  EKEFNQYKHKLDEFTPILEKSENDYNGVKLECEQLEGELQNHQQSLVQGESTTSLIKTEI 855

Query: 416  VELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQ 237
             ELE  L    +N K L    E  + +      +I +L+T +K           ++QKL 
Sbjct: 856  AELELSLVNEEHNRKKLTELIEIESAKFSGLNKEIDSLSTSMKTFESEINNGELTIQKLN 915

Query: 236  KEVDRLEDE 210
             E DRLE E
Sbjct: 916  HEFDRLERE 924


>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 2104

 Score = 31.9 bits (69), Expect = 0.095
 Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 3/161 (1%)
 Frame = -3

Query: 659  TAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKL 480
            T  L E    A E +   +   +R     ER+ +LENQ+         AD+KY+ +  + 
Sbjct: 873  TNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQV-------TIADEKYEFLYAEK 925

Query: 479  AMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKN---QIK 309
              +E DL                LE++L  +    K  +    K  + E++Y N     +
Sbjct: 926  QSIEEDLANKQTEISYLSDLSSTLEKKLSSI---KKDEQTISSKYKELEKDYLNIMADYQ 982

Query: 308  TLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEKEKY 186
              +  L            ++++L +++ RL+DEL+ ++  Y
Sbjct: 983  HSSQHLSNLEKAINEKNLNIRELNEKLMRLDDELLLKQRSY 1023


>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
           Psm3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1194

 Score = 31.5 bits (68), Expect = 0.13
 Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
 Frame = -3

Query: 584 LADEERMDALENQLKEARFLAEEADKKYDE-VARKLAMVEADLXXXXXXXXXXXSKIVEL 408
           L   ++   L+ Q + ++F  +   K+ DE +  +L  +  ++           ++  E+
Sbjct: 367 LLKNQKQSLLDKQSRTSQFTTK---KERDEWIRNQLLQINRNINSTKENSDYLKTEYDEM 423

Query: 407 EEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEV 228
           E EL+   +  K +E+S E    R  +    I ++  R +          R   KL+  +
Sbjct: 424 ENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWREEAKLKSSI 483

Query: 227 DRLEDEL 207
           + ++D+L
Sbjct: 484 ENVKDDL 490


>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1115

 Score = 31.1 bits (67), Expect = 0.17
 Identities = 26/149 (17%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
 Frame = -3

Query: 593 NRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIV 414
           N  +  E   + L + +  +R   +E   +   + ++L  +E D             + V
Sbjct: 475 NAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIEEDYENKLMRMEQQWREDV 534

Query: 413 E-LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTR----LKXXXXXXXXXXRSV 249
           + L+E +  +   L+  +    K+++  ++Y+  +  L T     ++           S+
Sbjct: 535 DQLQEYVEEITQELQDTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENEESI 594

Query: 248 QKLQKEVDRLEDELVAEKEKYKDIGDDLD 162
              ++EV++L DE+    E+Y D   + D
Sbjct: 595 SLFKEEVEKLTDEITQLSERYNDKCHEFD 623


>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 275

 Score = 30.7 bits (66), Expect = 0.22
 Identities = 22/59 (37%), Positives = 27/59 (45%)
 Frame = +2

Query: 521 QRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGP 697
           +RG  +     R R  +P P    SR+PY   R  RR   PR  +R RSR     SR P
Sbjct: 101 ERGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSPR--YRSRSRSPDGRSRSP 157


>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1208

 Score = 29.1 bits (62), Expect = 0.67
 Identities = 28/139 (20%), Positives = 60/139 (43%)
 Frame = -3

Query: 527 LAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEK 348
           + +E D+  +E+ +++   E ++           +K+ + EE    V N  +  +    +
Sbjct: 539 ITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDNDLRR 598

Query: 347 ANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEKEKYKDIGDD 168
            ++   + +++ K LT+ L+            +  L++ V  LE E  + K+       D
Sbjct: 599 FHESINKLQDREKELTSNLEKKNLV-------ISSLRETVAMLEKERESIKKYLSGNAKD 651

Query: 167 LDTAFVELILKE*ASVIQR 111
           LD   +  IL +  SV+QR
Sbjct: 652 LDNTNLMEILNDKISVLQR 670


>SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 510

 Score = 29.1 bits (62), Expect = 0.67
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 217 KTNLSPKRR-NTRTSETIWIPPS*SSFSRNKLPLYKDP 107
           K NL PKR  NTR S  + IPP  +S S    P +  P
Sbjct: 6   KLNLPPKRTINTRLSTPVHIPPPINSESTRITPQHGSP 43


>SPBC13G1.03c |pex14||peroxisomal membrane anchor
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 286

 Score = 28.7 bits (61), Expect = 0.89
 Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
 Frame = -3

Query: 557 LENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVG-- 384
           LEN  ++ R L+E  +K+ DE+   L  +E  L            +I  + +++  +   
Sbjct: 124 LENLDEQTRKLSERTEKQQDELDIALDDLEETLNTLKRTSENRDREIARISQDVYTMSTI 183

Query: 383 ---NNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLE 216
               +L+ ++ S+E+A Q      + ++ L T  K           S+  L+  +D  E
Sbjct: 184 TLPQSLEQIKKSQEEALQNLSREISSLRCLQTDSKKDDTFATTSNSSIPVLENPLDTSE 242


>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1085

 Score = 28.7 bits (61), Expect = 0.89
 Identities = 19/77 (24%), Positives = 39/77 (50%)
 Frame = -3

Query: 413 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 234
           E   +L V+  N+KS     +  ++  +E+K +++ L  +L             ++ ++ 
Sbjct: 483 EQARKLEVLDLNVKSSREQLQYVSKSNQEHKKEVEALQLQL-------VNSSTELESVKS 535

Query: 233 EVDRLEDELVAEKEKYK 183
           E ++L++ELV E EK K
Sbjct: 536 ENEKLKNELVLEIEKRK 552


>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1066

 Score = 28.7 bits (61), Expect = 0.89
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 271 PSSPSVPCRNCKRRSIGLKTNLSPKR 194
           P+SP+VP +     S+   TN+SP+R
Sbjct: 138 PNSPTVPSKFSLNPSVATSTNISPRR 163


>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 667

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = +2

Query: 239 AVSAR--NARRTRHVLQPPSDGW 301
           +V+AR  N RR RHVL  P +GW
Sbjct: 211 SVNARHDNLRRKRHVLVQPQEGW 233


>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 345

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 422 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTL 303
           +I +L EE + +   ++ LE   E+AN   E+Y+ Q + L
Sbjct: 147 QITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEAL 186


>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 633

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
 Frame = -3

Query: 617 ERARKVLENRSLADEERMDALENQLKEARFLAEE----ADK--KYDEVARKLAMVE 468
           E +RK +E         +  LEN++KEAR + EE    A+K   YDE+ R+L++++
Sbjct: 303 EASRKEMETHCAT----IQTLENEVKEARKVKEESLTLANKFSDYDEIKRELSVLK 354


>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
           Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 741

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 17/58 (29%), Positives = 23/58 (39%)
 Frame = +2

Query: 347 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPP 520
           PSP+ LP  S  Y +   PP +           P+ A     P+    Q  +IS  PP
Sbjct: 402 PSPMELPSPSTVYHQVFYPPTSTSVSSYGLGKTPQPAYGSSSPYVNGHQTQQISSLPP 459


>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 268

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = -3

Query: 638 SQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYD 498
           S  +++   +R++L   S +  E  D L + L+  RF+ ++A K Y+
Sbjct: 84  SLGSNQYSISRQLLRQPSFSSSENTDRLADLLRVRRFIYQKAWKSYE 130


>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 462

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
 Frame = -1

Query: 370 LWKSQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSV---PCRNCKRRSIGLKTNLSP 200
           L+KS+  +    K+   + S  SP     L H  +   +   P +N +RR+  L+T L P
Sbjct: 322 LFKSEEEKDPVGKQKLPLESSLSP-----LDHSSAEKEMQKAPAKNKRRRTGSLETGLYP 376

Query: 199 KRRNT----RTSETIW-IPPS*SSFSRNKLPLYKDPKSECPGNTISPR 71
           K   T    R+   +W +    S  +R K  L   P+S    +T  P+
Sbjct: 377 KESPTPSKKRSKRVLWSLKHIVSPGNREKHSLNSTPESIMKKDTKWPQ 424


>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 501

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = -3

Query: 251 VQKLQKEVDRLEDELVAEKEKYKDIGDDLDTAFVEL 144
           +QK +KE  +LE++L   + KY++  ++ +   V+L
Sbjct: 157 IQKAKKEESKLEEDLRNARAKYEESLEEFEDRMVQL 192


>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 935

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 114 LYNGSLFLENELYEGGIQIVSDVLVFLLFGDKFVFKP--IDLLLQFLHGTLGELGTCFSL 287
           LYN S  ++ ++        S + V + +G +FVF+   ID L + LH  L  +G C  L
Sbjct: 499 LYNISRGIDTDIINNETPRRS-ISVDVNWGVRFVFQEDGIDFLKRLLHELLSRMGKCQVL 557

Query: 288 L 290
           L
Sbjct: 558 L 558


>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 438

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 254 SVQKLQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE 132
           +++   KEV  ++ +   +K+K  D  DD++  + E +L E
Sbjct: 69  TIESDTKEVQNIKPKSKKKKKKLNDSSDDIEGKYFEELLAE 109


>SPBC947.12 |kms2||spindle pole body protein
           Kms2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 457

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 21/92 (22%), Positives = 38/92 (41%)
 Frame = -3

Query: 644 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 465
           +A++   + E+ ++ L  R+    E +D+ E   K     A+  +KK+ E  R      A
Sbjct: 180 QAAELRSKDEQVKE-LNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAA 238

Query: 464 DLXXXXXXXXXXXSKIVELEEELRVVGNNLKS 369
            L           + IV +EE +  V    K+
Sbjct: 239 QLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270


>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
           heterochromatin assembly Hrr1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1015

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 68  QYSNIDSNFNFVFLTLSY 15
           Q +NI  NFN  F+TLSY
Sbjct: 490 QITNIMHNFNLEFVTLSY 507


>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
           Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 537

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 461 SQPQPWPAYEQPHRISCRPPQRGTWLPSADS 553
           S P P P   QP ++S   P     LPSA S
Sbjct: 381 STPLPEPTPGQPRKVSGHNPPSARRLPSASS 411


>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 568

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 364 KSQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRSIGLKTNLSPKRRNT 185
           KS        K+S ++  KP   V  ++   P  PS+     K  S+  K+   PKR  T
Sbjct: 106 KSNGNARKETKQSERVNYKPGMRVLTKMSGFPWWPSMVVTESKMTSVARKS--KPKRAGT 163


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 25/85 (29%), Positives = 30/85 (35%)
 Frame = +2

Query: 452 RAPSQPQPWPAYEQPHRISCRPPQRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRR 631
           R  + P P P    P      PP     LP     G P AP  P +   AP + A +   
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPM----GAPAAPPLPPSAPIAPPLPAGMPAA 466

Query: 632 PGWPRTAWRWRSRDAPRTSRGPPPA 706
           P  P  A       AP  +  P PA
Sbjct: 467 PPLPPAA------PAPPPAPAPAPA 485


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,448,511
Number of Sequences: 5004
Number of extensions: 50354
Number of successful extensions: 264
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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