BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l24r (724 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 43 4e-05 SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 37 0.003 SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 36 0.008 SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.055 SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 32 0.072 SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 32 0.095 SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 32 0.095 SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 31 0.13 SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 31 0.17 SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 31 0.22 SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 0.67 SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyce... 29 0.67 SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 29 0.89 SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 29 0.89 SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 29 0.89 SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 28 1.2 SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.6 SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 28 1.6 SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 28 1.6 SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 2.1 SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.1 SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 2.1 SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 27 3.6 SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 26 4.7 SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 26 6.3 SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 26 6.3 SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 6.3 SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 25 8.3 SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 8.3 >SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr 1|||Manual Length = 161 Score = 43.2 bits (97), Expect = 4e-05 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 10/147 (6%) Frame = -3 Query: 572 ERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEE-- 399 E+++A + EA AE A+ K EV +L++ E + S++ ELEEE Sbjct: 6 EKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK 65 Query: 398 -LRVVGNNLKSLEVSEEKANQR----EEEYKNQIKTL---TTRLKXXXXXXXXXXRSVQK 243 LR+ +N + E+ +++ EEE + K L T +++ R VQ Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQS 125 Query: 242 LQKEVDRLEDELVAEKEKYKDIGDDLD 162 L++E D +E +L +KY + +LD Sbjct: 126 LERERDDMEQKLEEMTDKYTKVKAELD 152 >SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces pombe|chr 1|||Manual Length = 1957 Score = 36.7 bits (81), Expect = 0.003 Identities = 20/83 (24%), Positives = 40/83 (48%) Frame = -3 Query: 410 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKE 231 LE+E + + LKSLE ++ + EE ++ LT +LK + + Q+E Sbjct: 897 LEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEE 956 Query: 230 VDRLEDELVAEKEKYKDIGDDLD 162 + L++E +++ + + LD Sbjct: 957 ISNLKEENMSQSQAITSVKSKLD 979 Score = 27.1 bits (57), Expect = 2.7 Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 2/148 (1%) Frame = -3 Query: 665 TATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVAR 486 T ++L++A E+ K L+ + + + + +K+ EEA Sbjct: 382 TIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSLAHATG 441 Query: 485 KLAMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKA--NQREEEYKNQI 312 KLA + ++ ++E++LR N+ S E+ E+ A +++++E N Sbjct: 442 KLAEINSE----RDFQNKKIKDFEKIEQDLRACLNS-SSNELKEKSALIDKKDQELNN-- 494 Query: 311 KTLTTRLKXXXXXXXXXXRSVQKLQKEV 228 L ++K S+Q LQ+++ Sbjct: 495 --LREQIKEQKKVSESTQSSLQSLQRDI 520 >SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 566 Score = 35.5 bits (78), Expect = 0.008 Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 5/96 (5%) Frame = -1 Query: 340 NAKRSTKIRSKPSPPV*RRLKHVPSS-PSVPCRNCKRRSIGLKTNLSPKRRNTRTSETIW 164 NAK + R SP L +PSS PS +N + I + S + N R++E ++ Sbjct: 186 NAKNYEENREPMSPSPQEALPLMPSSPPSQDYQNDQNHLILYTNSESIPKLNLRSNELVY 245 Query: 163 IPPS*SSFSRNKLPLYKD---PKSECPGNT-ISPRF 68 PPS + L L KD KS+C NT + P F Sbjct: 246 PPPS-KDLLQKLLALEKDGQVEKSDCSKNTQLKPSF 280 >SPCC162.08c |nup211||nuclear pore complex associated protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 1837 Score = 32.7 bits (71), Expect = 0.055 Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 1/121 (0%) Frame = -3 Query: 653 KLSEASQAADESERARKVLENRSLADEE-RMDALENQLKEARFLAEEADKKYDEVARKLA 477 KL + + A S+ ++E S R++ L N+L+ + ++ +KK++E L Sbjct: 642 KLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSLQ 701 Query: 476 MVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTT 297 + ++++ S +E +L KSL +SE ++ +E YK+ + L + Sbjct: 702 LEKSNIQLQLTSLTSERSLALEKLNDLE------KSLVLSERSKDELDESYKSLQEQLAS 755 Query: 296 R 294 + Sbjct: 756 K 756 >SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1727 Score = 32.3 bits (70), Expect = 0.072 Identities = 19/82 (23%), Positives = 38/82 (46%) Frame = -3 Query: 404 EELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVD 225 +ELR + NL+ + +++ + E + +L RLK ++ Q+ + Sbjct: 713 KELRSINQNLQDIISRQDQRASKFAEELLHVNSLAERLKGELNASKGEKDLRKRTQERLI 772 Query: 224 RLEDELVAEKEKYKDIGDDLDT 159 D+L+AE+E+ + DL T Sbjct: 773 SENDKLLAERERLMSLVSDLQT 794 Score = 28.7 bits (61), Expect = 0.89 Identities = 19/79 (24%), Positives = 38/79 (48%) Frame = -3 Query: 413 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 234 +L+E + N+L SL+ S EK+ EY ++IKTL + + Q ++ Sbjct: 823 KLKESNEKMSNDLHSLQKSLEKSGI---EYSSRIKTLMLEKQSLSEDNRKLLDNQQMMEI 879 Query: 233 EVDRLEDELVAEKEKYKDI 177 ++ L + EK+++ + Sbjct: 880 KLQELNGVIELEKQRFSTL 898 >SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosaccharomyces pombe|chr 2|||Manual Length = 1172 Score = 31.9 bits (69), Expect = 0.095 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%) Frame = -3 Query: 575 EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXS-------KI 417 E+ + +++L E + E+++ Y+ V + +E +L S +I Sbjct: 796 EKEFNQYKHKLDEFTPILEKSENDYNGVKLECEQLEGELQNHQQSLVQGESTTSLIKTEI 855 Query: 416 VELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQ 237 ELE L +N K L E + + +I +L+T +K ++QKL Sbjct: 856 AELELSLVNEEHNRKKLTELIEIESAKFSGLNKEIDSLSTSMKTFESEINNGELTIQKLN 915 Query: 236 KEVDRLEDE 210 E DRLE E Sbjct: 916 HEFDRLERE 924 >SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces pombe|chr 1|||Manual Length = 2104 Score = 31.9 bits (69), Expect = 0.095 Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 3/161 (1%) Frame = -3 Query: 659 TAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKL 480 T L E A E + + +R ER+ +LENQ+ AD+KY+ + + Sbjct: 873 TNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQV-------TIADEKYEFLYAEK 925 Query: 479 AMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKN---QIK 309 +E DL LE++L + K + K + E++Y N + Sbjct: 926 QSIEEDLANKQTEISYLSDLSSTLEKKLSSI---KKDEQTISSKYKELEKDYLNIMADYQ 982 Query: 308 TLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEKEKY 186 + L ++++L +++ RL+DEL+ ++ Y Sbjct: 983 HSSQHLSNLEKAINEKNLNIRELNEKLMRLDDELLLKQRSY 1023 >SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Schizosaccharomyces pombe|chr 1|||Manual Length = 1194 Score = 31.5 bits (68), Expect = 0.13 Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 1/127 (0%) Frame = -3 Query: 584 LADEERMDALENQLKEARFLAEEADKKYDE-VARKLAMVEADLXXXXXXXXXXXSKIVEL 408 L ++ L+ Q + ++F + K+ DE + +L + ++ ++ E+ Sbjct: 367 LLKNQKQSLLDKQSRTSQFTTK---KERDEWIRNQLLQINRNINSTKENSDYLKTEYDEM 423 Query: 407 EEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEV 228 E EL+ + K +E+S E R + I ++ R + R KL+ + Sbjct: 424 ENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWREEAKLKSSI 483 Query: 227 DRLEDEL 207 + ++D+L Sbjct: 484 ENVKDDL 490 >SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1115 Score = 31.1 bits (67), Expect = 0.17 Identities = 26/149 (17%), Positives = 61/149 (40%), Gaps = 5/149 (3%) Frame = -3 Query: 593 NRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIV 414 N + E + L + + +R +E + + ++L +E D + V Sbjct: 475 NAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIEEDYENKLMRMEQQWREDV 534 Query: 413 E-LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTR----LKXXXXXXXXXXRSV 249 + L+E + + L+ + K+++ ++Y+ + L T ++ S+ Sbjct: 535 DQLQEYVEEITQELQDTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENEESI 594 Query: 248 QKLQKEVDRLEDELVAEKEKYKDIGDDLD 162 ++EV++L DE+ E+Y D + D Sbjct: 595 SLFKEEVEKLTDEITQLSERYNDKCHEFD 623 >SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 275 Score = 30.7 bits (66), Expect = 0.22 Identities = 22/59 (37%), Positives = 27/59 (45%) Frame = +2 Query: 521 QRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGP 697 +RG + R R +P P SR+PY R RR PR +R RSR SR P Sbjct: 101 ERGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSPR--YRSRSRSPDGRSRSP 157 >SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1208 Score = 29.1 bits (62), Expect = 0.67 Identities = 28/139 (20%), Positives = 60/139 (43%) Frame = -3 Query: 527 LAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEK 348 + +E D+ +E+ +++ E ++ +K+ + EE V N + + + Sbjct: 539 ITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDNDLRR 598 Query: 347 ANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEKEKYKDIGDD 168 ++ + +++ K LT+ L+ + L++ V LE E + K+ D Sbjct: 599 FHESINKLQDREKELTSNLEKKNLV-------ISSLRETVAMLEKERESIKKYLSGNAKD 651 Query: 167 LDTAFVELILKE*ASVIQR 111 LD + IL + SV+QR Sbjct: 652 LDNTNLMEILNDKISVLQR 670 >SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyces pombe|chr 1|||Manual Length = 510 Score = 29.1 bits (62), Expect = 0.67 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -1 Query: 217 KTNLSPKRR-NTRTSETIWIPPS*SSFSRNKLPLYKDP 107 K NL PKR NTR S + IPP +S S P + P Sbjct: 6 KLNLPPKRTINTRLSTPVHIPPPINSESTRITPQHGSP 43 >SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 286 Score = 28.7 bits (61), Expect = 0.89 Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%) Frame = -3 Query: 557 LENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVG-- 384 LEN ++ R L+E +K+ DE+ L +E L +I + +++ + Sbjct: 124 LENLDEQTRKLSERTEKQQDELDIALDDLEETLNTLKRTSENRDREIARISQDVYTMSTI 183 Query: 383 ---NNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLE 216 +L+ ++ S+E+A Q + ++ L T K S+ L+ +D E Sbjct: 184 TLPQSLEQIKKSQEEALQNLSREISSLRCLQTDSKKDDTFATTSNSSIPVLENPLDTSE 242 >SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces pombe|chr 1|||Manual Length = 1085 Score = 28.7 bits (61), Expect = 0.89 Identities = 19/77 (24%), Positives = 39/77 (50%) Frame = -3 Query: 413 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 234 E +L V+ N+KS + ++ +E+K +++ L +L ++ ++ Sbjct: 483 EQARKLEVLDLNVKSSREQLQYVSKSNQEHKKEVEALQLQL-------VNSSTELESVKS 535 Query: 233 EVDRLEDELVAEKEKYK 183 E ++L++ELV E EK K Sbjct: 536 ENEKLKNELVLEIEKRK 552 >SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 1066 Score = 28.7 bits (61), Expect = 0.89 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -1 Query: 271 PSSPSVPCRNCKRRSIGLKTNLSPKR 194 P+SP+VP + S+ TN+SP+R Sbjct: 138 PNSPTVPSKFSLNPSVATSTNISPRR 163 >SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 667 Score = 28.3 bits (60), Expect = 1.2 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%) Frame = +2 Query: 239 AVSAR--NARRTRHVLQPPSDGW 301 +V+AR N RR RHVL P +GW Sbjct: 211 SVNARHDNLRRKRHVLVQPQEGW 233 >SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 345 Score = 27.9 bits (59), Expect = 1.6 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = -3 Query: 422 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTL 303 +I +L EE + + ++ LE E+AN E+Y+ Q + L Sbjct: 147 QITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEAL 186 >SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 633 Score = 27.9 bits (59), Expect = 1.6 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 6/56 (10%) Frame = -3 Query: 617 ERARKVLENRSLADEERMDALENQLKEARFLAEE----ADK--KYDEVARKLAMVE 468 E +RK +E + LEN++KEAR + EE A+K YDE+ R+L++++ Sbjct: 303 EASRKEMETHCAT----IQTLENEVKEARKVKEESLTLANKFSDYDEIKRELSVLK 354 >SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosaccharomyces pombe|chr 1|||Manual Length = 741 Score = 27.9 bits (59), Expect = 1.6 Identities = 17/58 (29%), Positives = 23/58 (39%) Frame = +2 Query: 347 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPP 520 PSP+ LP S Y + PP + P+ A P+ Q +IS PP Sbjct: 402 PSPMELPSPSTVYHQVFYPPTSTSVSSYGLGKTPQPAYGSSSPYVNGHQTQQISSLPP 459 >SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 268 Score = 27.5 bits (58), Expect = 2.1 Identities = 13/47 (27%), Positives = 26/47 (55%) Frame = -3 Query: 638 SQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYD 498 S +++ +R++L S + E D L + L+ RF+ ++A K Y+ Sbjct: 84 SLGSNQYSISRQLLRQPSFSSSENTDRLADLLRVRRFIYQKAWKSYE 130 >SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 462 Score = 27.5 bits (58), Expect = 2.1 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 8/108 (7%) Frame = -1 Query: 370 LWKSQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSV---PCRNCKRRSIGLKTNLSP 200 L+KS+ + K+ + S SP L H + + P +N +RR+ L+T L P Sbjct: 322 LFKSEEEKDPVGKQKLPLESSLSP-----LDHSSAEKEMQKAPAKNKRRRTGSLETGLYP 376 Query: 199 KRRNT----RTSETIW-IPPS*SSFSRNKLPLYKDPKSECPGNTISPR 71 K T R+ +W + S +R K L P+S +T P+ Sbjct: 377 KESPTPSKKRSKRVLWSLKHIVSPGNREKHSLNSTPESIMKKDTKWPQ 424 >SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 501 Score = 27.5 bits (58), Expect = 2.1 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = -3 Query: 251 VQKLQKEVDRLEDELVAEKEKYKDIGDDLDTAFVEL 144 +QK +KE +LE++L + KY++ ++ + V+L Sbjct: 157 IQKAKKEESKLEEDLRNARAKYEESLEEFEDRMVQL 192 >SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 935 Score = 26.6 bits (56), Expect = 3.6 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +3 Query: 114 LYNGSLFLENELYEGGIQIVSDVLVFLLFGDKFVFKP--IDLLLQFLHGTLGELGTCFSL 287 LYN S ++ ++ S + V + +G +FVF+ ID L + LH L +G C L Sbjct: 499 LYNISRGIDTDIINNETPRRS-ISVDVNWGVRFVFQEDGIDFLKRLLHELLSRMGKCQVL 557 Query: 288 L 290 L Sbjct: 558 L 558 >SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces pombe|chr 1|||Manual Length = 438 Score = 26.2 bits (55), Expect = 4.7 Identities = 11/41 (26%), Positives = 23/41 (56%) Frame = -3 Query: 254 SVQKLQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE 132 +++ KEV ++ + +K+K D DD++ + E +L E Sbjct: 69 TIESDTKEVQNIKPKSKKKKKKLNDSSDDIEGKYFEELLAE 109 >SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharomyces pombe|chr 2|||Manual Length = 457 Score = 25.8 bits (54), Expect = 6.3 Identities = 21/92 (22%), Positives = 38/92 (41%) Frame = -3 Query: 644 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 465 +A++ + E+ ++ L R+ E +D+ E K A+ +KK+ E R A Sbjct: 180 QAAELRSKDEQVKE-LNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAA 238 Query: 464 DLXXXXXXXXXXXSKIVELEEELRVVGNNLKS 369 L + IV +EE + V K+ Sbjct: 239 QLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270 >SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochromatin assembly Hrr1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1015 Score = 25.8 bits (54), Expect = 6.3 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -3 Query: 68 QYSNIDSNFNFVFLTLSY 15 Q +NI NFN F+TLSY Sbjct: 490 QITNIMHNFNLEFVTLSY 507 >SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 537 Score = 25.8 bits (54), Expect = 6.3 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +2 Query: 461 SQPQPWPAYEQPHRISCRPPQRGTWLPSADS 553 S P P P QP ++S P LPSA S Sbjct: 381 STPLPEPTPGQPRKVSGHNPPSARRLPSASS 411 >SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 568 Score = 25.4 bits (53), Expect = 8.3 Identities = 17/60 (28%), Positives = 25/60 (41%) Frame = -1 Query: 364 KSQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRSIGLKTNLSPKRRNT 185 KS K+S ++ KP V ++ P PS+ K S+ K+ PKR T Sbjct: 106 KSNGNARKETKQSERVNYKPGMRVLTKMSGFPWWPSMVVTESKMTSVARKS--KPKRAGT 163 >SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 574 Score = 25.4 bits (53), Expect = 8.3 Identities = 25/85 (29%), Positives = 30/85 (35%) Frame = +2 Query: 452 RAPSQPQPWPAYEQPHRISCRPPQRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRR 631 R + P P P P PP LP G P AP P + AP + A + Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPM----GAPAAPPLPPSAPIAPPLPAGMPAA 466 Query: 632 PGWPRTAWRWRSRDAPRTSRGPPPA 706 P P A AP + P PA Sbjct: 467 PPLPPAA------PAPPPAPAPAPA 485 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,448,511 Number of Sequences: 5004 Number of extensions: 50354 Number of successful extensions: 264 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 235 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 260 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 339215786 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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