Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10l24r
(724 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 32 0.021
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 31 0.027
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.063
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 27 0.78
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 1.4
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 25 2.4
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 25 2.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 25 3.1
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 25 3.1
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 3.1
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 7.2
AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 23 7.2
AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein. 23 7.2
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 7.2
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 23 9.6
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 31.9 bits (69), Expect = 0.021
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 347 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHA 445
P PL + E + C+QR+ A P+A R IRR A
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASRAVIRREERA 874
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 31.5 bits (68), Expect = 0.027
Identities = 26/163 (15%), Positives = 66/163 (40%)
Frame = -3
Query: 656 AKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLA 477
A+ ++ +A + K+ + + + E A E LK ++ +EE+ K + + +
Sbjct: 760 ARETQTQCSAKVKDLQAKIADGKGHRERELKSA-EEDLKRSKKKSEESRKNWKKHEQDFE 818
Query: 476 MVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTT 297
++ ++ + V+LEE++ + L + + ++ K QIK
Sbjct: 819 TLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKE 878
Query: 296 RLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEKEKYKDIGDD 168
++ KL K+ D L+ E+ ++ + + ++
Sbjct: 879 KMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEITKVRNE 921
Score = 28.7 bits (61), Expect = 0.19
Identities = 42/216 (19%), Positives = 85/216 (39%)
Frame = -3
Query: 668 ATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVA 489
A +L E S DE A L+ + +E+M++ +LK ++ K+ DE+
Sbjct: 846 AALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELK 905
Query: 488 RKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIK 309
++ E ++ +I +E++ + + + V N R + K +
Sbjct: 906 LEIKKKENEITKVRNENKDGYDRISGMEQKYPWIPEDKEFFGVK----NTRYDYNKEDPQ 961
Query: 308 TLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE* 129
+LK R+V + + E+E E + K + +D D ++ I+ +
Sbjct: 962 EAGRKLKKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVED-DKKKIQAIITD- 1019
Query: 128 ASVIQRPEV*VPWQHHQPAIQYSNIDSNFNFVFLTL 21
++ ++ V W S +D NF +F TL
Sbjct: 1020 LDEEKKKKLKVAW---------SEVDENFGSIFSTL 1046
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.063
Identities = 22/133 (16%), Positives = 56/133 (42%)
Frame = -3
Query: 605 KVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXX 426
KVL+ + +++D L + + + +++ + K+ +E ++
Sbjct: 896 KVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGN 955
Query: 425 SKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQ 246
+ +LEEE + L+ ++++ EKA++ K +I L R + +Q
Sbjct: 956 DERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQ 1015
Query: 245 KLQKEVDRLEDEL 207
++ ++ +D L
Sbjct: 1016 TIETKLQETKDTL 1028
Score = 27.1 bits (57), Expect = 0.59
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 11/191 (5%)
Frame = -3
Query: 650 LSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMV 471
L E + E E R +E DAL+ + E L +E K+YDE+
Sbjct: 315 LCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDELVSAKESK 374
Query: 470 EADLXXXXXXXXXXXSKIVELEEELR-----VVGNNLKSLEVSE-EKANQRE-EEYKNQI 312
E+ L + + E + + + LE+ + K N++E EE + +I
Sbjct: 375 ESTLKNSLDKFAKVQANMRATNERRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKI 434
Query: 311 KTLT---TRLKXXXXXXXXXXRSVQK-LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVEL 144
++LT T ++ + K L +E ++L+ EL+ K + L A EL
Sbjct: 435 ESLTRQKTEVEAKLTANLATLKDETKVLLEEKEKLQTELIELKRAVDESKSALSIAESEL 494
Query: 143 ILKE*ASVIQR 111
+ + V +R
Sbjct: 495 KICQHDEVTER 505
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.6 bits (56), Expect = 0.78
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = -3
Query: 623 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 492
+ E + E + ADEE D E ++L+EAR +AEE +++ E+
Sbjct: 76 DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.8 bits (54), Expect = 1.4
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = -3
Query: 389 VGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDE 210
+ N K +E + +A +R+E+ + IKT L+ + V ++ + L+ E
Sbjct: 427 IEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSE 486
Query: 209 LVAEKEKYKD 180
L +E+ D
Sbjct: 487 LDNVREQLGD 496
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 25.0 bits (52), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 377 LKSLEVSEEKANQREEEYKNQIKTLTTRLK 288
LKS + +KA+QR +E K IKT +K
Sbjct: 219 LKSADGDVQKAHQRIDEGKRTIKTYEALVK 248
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 25.0 bits (52), Expect = 2.4
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Frame = -3
Query: 422 KIVELEEELRVVGNNLKSLEVSEEKANQREEE-----------YKNQIKTLTTRLKXXXX 276
K+ ++ E LR + + LK+LE +E+ ++ ++ Y+ ++K +L+
Sbjct: 185 KLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQLEELDG 244
Query: 275 XXXXXXRS----VQKLQKEVDRLEDELVAEKEKYKDI 177
Q++QK DRL++ A K+ KD+
Sbjct: 245 QRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV 281
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.6 bits (51), Expect = 3.1
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 3/147 (2%)
Frame = -3
Query: 575 EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEEL 396
E R++ALE QL+ R E + + +ARK A +E + K+ +
Sbjct: 198 EARLEALEAQLQSMRAREEFQQQIHVCMARK-AWLEYEELFLLYSATLKDLKLAK----- 251
Query: 395 RVVGNNLKSLEVSEEKANQREEEYKNQI---KTLTTRLKXXXXXXXXXXRSVQKLQKEVD 225
K E E++ NQ ++E + + K L T + L+++ +
Sbjct: 252 -------KCTEEKEQQYNQFKQEMEAILARKKELETSKAKQVAIGQRSTDEINSLEEKTE 304
Query: 224 RLEDELVAEKEKYKDIGDDLDTAFVEL 144
RLED + +K + D D EL
Sbjct: 305 RLEDTISKQKRELMDALAKADERKTEL 331
Score = 23.0 bits (47), Expect = 9.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -3
Query: 620 SERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 465
+ R +LE R EER + E + + A K V +KLA V+A
Sbjct: 725 ASREHDLLEQRIRLFEERNNDREANFRLLEDAYQSAKKTLANVEKKLAEVKA 776
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.6 bits (51), Expect = 3.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 578 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRT 685
PP S PY+ IHR P R + + PR+
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPRS 265
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.6 bits (51), Expect = 3.1
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = +2
Query: 515 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 604
PP R W P GRP P H PTT + AP
Sbjct: 90 PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.4 bits (48), Expect = 7.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 81 MVLPGHSDFGSLYNGSLFL-ENELYEGGIQIVSDVLVFLLFGDKFVFKP 224
M P SD + G L+ EN + I + S+ +V +LFG K F P
Sbjct: 440 MFEPPVSDPNLIEGGLLYTPENLINLSDISVSSETVVQVLFGLKRSFTP 488
>AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein.
Length = 412
Score = 23.4 bits (48), Expect = 7.2
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = -3
Query: 365 EVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLED 213
++ ++ Q E+E++ TL +L + LQK++D L D
Sbjct: 99 QLLDDAQRQMEQEHRQYAATLEEQLHAAQQETQQEQEMKKALQKQLDALTD 149
>AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein.
Length = 603
Score = 23.4 bits (48), Expect = 7.2
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 332 EEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEK--EKYK 183
E++KN +++ + L + V+K+ K+VD L +L+ K + YK
Sbjct: 463 EKFKNICESIISELLPLQKPAVEVEKVVKKVSKDVDMLFGDLLKNKGAQNYK 514
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.4 bits (48), Expect = 7.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -3
Query: 647 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKY 501
SE+S ++DES+ ++ S + EER E+ ++ ++ +E KY
Sbjct: 1926 SESSSSSDESD------DSNSSSSEERKPNREHFFEKQQYTEKECPVKY 1968
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -1
Query: 361 SQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRS 227
++ PT ++ S P PP+ R + +P SP +RR+
Sbjct: 1088 NEAAEPTGEVEEEEV-SPPVPPIPPRSRRLPPSPRTTEMRRRRRN 1131
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,814
Number of Sequences: 2352
Number of extensions: 12711
Number of successful extensions: 55
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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