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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l21r
         (743 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821...   124   1e-28
07_03_0571 - 19602755-19603831                                         61   7e-13
11_02_0119 - 8502455-8503015,8503311-8504009,8504512-8504571,850...    31   0.73 
07_03_1697 - 28795521-28797328,28797430-28797550                       31   0.73 
05_07_0367 - 29700855-29700920,29701092-29701149,29701446-297015...    29   2.9  
03_06_0737 + 35879723-35879990,35880105-35880201,35880464-358805...    29   3.9  
07_01_0696 - 5261008-5263128                                           29   5.2  

>10_05_0025 +
           8215685-8215716,8215859-8215937,8216340-8216412,
           8216712-8216864,8217456-8217569,8217649-8217776,
           8219004-8219099,8219479-8219601,8219694-8219810,
           8219983-8220104,8220439-8220508
          Length = 368

 Score =  124 bits (298), Expect = 1e-28
 Identities = 87/257 (33%), Positives = 141/257 (54%), Gaps = 44/257 (17%)
 Frame = -3

Query: 690 PPEDDPKQLFVAMTSDRGLCGAVHT---GVSKVIRNRLSEPGAENIKVICVGDKSRGILQ 520
           P  D  K + VA+TSD+GLCG +++    VSK +    S P  E+ K + +G+K +  L 
Sbjct: 112 PSVDVKKNVIVAITSDKGLCGGINSTSVKVSKALHKLTSGPEKES-KYVILGEKGKVQLI 170

Query: 519 RLYGKHIISVANEIGRLPPTF-------------LDASQLATAILTS------------- 418
           R    +I    +E+ + P  +             +  ++L +A+L +             
Sbjct: 171 RDSKDNIEMTVSELQKNPINYTQDKEWHWWWRKVVQLAELVSAVLITLQQKFTDVIAVLA 230

Query: 417 -----GYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLD--------- 280
                  E+ + ++++NKF SV+S+  +   + + + +E  S+      LD         
Sbjct: 231 DDILKNVEYDALRVVFNKFHSVISFKPTMTTILSPEVMEKESESGKVGDLDSYEIEGGET 290

Query: 279 -SDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQA 103
            S++LQ+ TEF  + +++ A  E ACSE  +RM+AMD++S+NAGEM+D+LTLT+NRTRQA
Sbjct: 291 KSEILQNLTEFQFSCVMYNAALENACSELGARMSAMDSSSRNAGEMLDRLTLTYNRTRQA 350

Query: 102 VITRELIEIISGAAALD 52
            IT ELIEIISGA+AL+
Sbjct: 351 SITTELIEIISGASALE 367


>07_03_0571 - 19602755-19603831
          Length = 358

 Score = 60.9 bits (141), Expect(2) = 7e-13
 Identities = 32/85 (37%), Positives = 52/85 (61%)
 Frame = -3

Query: 309 SKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLT 130
           S +  ++     +L +     L S +  AL+E   SE ++RM+AM +A+ NA E+   L+
Sbjct: 273 SPVVQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLS 332

Query: 129 LTFNRTRQAVITRELIEIISGAAAL 55
           + +NR RQA IT E++EI++GA AL
Sbjct: 333 MVYNRQRQAKITGEILEIVAGADAL 357



 Score = 30.7 bits (66), Expect(2) = 7e-13
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
 Frame = -3

Query: 672 KQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVGDKSRGILQRLYGKHI 499
           K   V +T +RGLCG+ +  V K    R+ E     ++  V+ VG K      R   +  
Sbjct: 111 KVALVVLTGERGLCGSFNNNVLKKAETRIEELKQLGLEYTVVSVGKKGNAYFIR---RPF 167

Query: 498 ISVAN--EIGRLPPTFLDASQLATAILTSGYEFGSGKI--IYNKFKSVV---SYAQSDLP 340
           I      E+  + PT  D+  +   + +        K+  +Y+KF S+V      Q+ LP
Sbjct: 168 IPTERTLEVNGI-PTVKDSQSICDLVYSLFVSEAVDKVELLYSKFVSLVRSDPIIQTLLP 226

Query: 339 LYTKKSI 319
           +  K  I
Sbjct: 227 MSPKGEI 233


>11_02_0119 -
           8502455-8503015,8503311-8504009,8504512-8504571,
           8504744-8504800
          Length = 458

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 21/79 (26%), Positives = 35/79 (44%)
 Frame = +1

Query: 469 ETSDLISNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVYSSAQTSVR 648
           E ++  SN ++ L   ++ D     S  + LDVL    +  VAD +    +  +A+ +  
Sbjct: 105 EVAECESNAHNDLEQITMDDIGELYSLCEELDVLDDDSSSWVADPWSSFQLVPTAEATDV 164

Query: 649 GHSNKQLLGVIFGRCNLSP 705
             +    LG I G C  SP
Sbjct: 165 DDAVVAALGAIDGSCRPSP 183


>07_03_1697 - 28795521-28797328,28797430-28797550
          Length = 642

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 310 GALNRLLSVEGQVGLGVRDHRLELVVNDLSGTK-LVSRGEDSSGQLTCVQESRWETSDLI 486
           G    ++S    +G G+  H   L  +D++ T       + SSGQ      SR ET DL+
Sbjct: 46  GNSQEVISAPSSLGSGLPPHSKHLGSSDVASTSGSTPEAQISSGQQGADMTSRRETDDLV 105

Query: 487 SNTND 501
           S  N+
Sbjct: 106 SARNN 110


>05_07_0367 -
           29700855-29700920,29701092-29701149,29701446-29701503,
           29701800-29701857,29702154-29702211,29702508-29702551,
           29702840-29703022,29703192-29703249,29703545-29703602,
           29703897-29703954,29704250-29704307,29704956-29705013,
           29705310-29705367,29705664-29705721,29706348-29706398,
           29706695-29706752,29707049-29707106,29707403-29707459,
           29707754-29707810,29708085-29708135,29708431-29708507,
           29708785-29708842,29709139-29709195,29709490-29709546,
           29709821-29709893,29710167-29710224,29710521-29710578,
           29710875-29710931,29711558-29711608,29711904-29711980,
           29712258-29712315,29712612-29712669,29712966-29713016,
           29713667-29713717,29714014-29714057,29714368-29714444,
           29714722-29714779,29715076-29715126,29715423-29715480,
           29715776-29715833,29716130-29716187,29716484-29716534,
           29716831-29716907,29717185-29717242,29717539-29717589,
           29718240-29718316,29718594-29718651,29718947-29719004,
           29719301-29719351,29719648-29719705,29723277-29723334,
           29723631-29723681,29724331-29724388,29724684-29724741,
           29725038-29725088,29725385-29725442,29725738-29725814,
           29726092-29726148,29726444-29726501,29726798-29726848,
           29727070-29727075
          Length = 1209

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -1

Query: 521 RDCTESTSLVLLMRSDVSHLLSWTQVSWPLLSSPR-DTSLVPERSFTTSSSLWSRTPSPT 345
           R   E+T+    M SD+      T  SWP+L + R  T     R F T ++ W  +  P+
Sbjct: 420 RRFAETTAASWPMPSDIRRFAETTAASWPMLWTLRYSTFRRNNRCFVTYATSWKTSCGPS 479


>03_06_0737 +
           35879723-35879990,35880105-35880201,35880464-35880591,
           35880686-35880767,35880855-35880918,35880930-35881022,
           35881120-35881178,35881391-35881826,35882050-35882120,
           35882201-35882351
          Length = 482

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 578 GSLRRLRITLDTPVCTAPHKPLSEVIAT---NNCLGSSSGGVTSA 703
           GSL+R R++        PH   S  I     + C+GSS  G TSA
Sbjct: 337 GSLQRNRVSYQVDSLMLPHPDPSHAICLPSHDTCMGSSGHGSTSA 381


>07_01_0696 - 5261008-5263128
          Length = 706

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 288 SLDSDVLQSYTEFSLASLLFYALKEGAC 205
           S+D D LQS+     AS LF +L +G+C
Sbjct: 429 SIDEDELQSFVPEFAASNLFVSLPQGSC 456


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,399,365
Number of Sequences: 37544
Number of extensions: 390057
Number of successful extensions: 1237
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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