Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l21r
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    27   0.61 
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           27   0.61 
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           27   0.61 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.3  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   3.3  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   3.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   7.5  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   10.0 

>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 468 PPTFLDASQLATAILTSGYEFGSGKI-IYNKFKSVVSYAQS 349
           PP++ D  + A  +   GY FG  K+ +  K  S V ++ S
Sbjct: 3   PPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTS 43


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 468 PPTFLDASQLATAILTSGYEFGSGKI-IYNKFKSVVSYAQS 349
           PP++ D  + A  +   GY FG  K+ +  K  S V ++ S
Sbjct: 3   PPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTS 43


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 468 PPTFLDASQLATAILTSGYEFGSGKI-IYNKFKSVVSYAQS 349
           PP++ D  + A  +   GY FG  K+ +  K  S V ++ S
Sbjct: 3   PPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTS 43


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -3

Query: 291 DSLDSDVLQSYTEFSLASLLFYALKEGA--CSEQSSRMTAMDNASK 160
           D   + VL   T  SL S+ F++ +  +  C++Q+ + +  DNA++
Sbjct: 14  DRPKTTVLHLRTYTSLQSIAFFSTRRSSAHCTQQTRQASCSDNAAQ 59


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 395 FPEPNSYPEVRIAVAS*LASKKVGGRRPISLATLMMCFPYNL 520
           +P PN YP++   V + L  +KV   R  S  T +M   Y L
Sbjct: 14  YPTPNGYPQINGEVDAPLDFRKVESLRRNSTDTGIMDQQYCL 55



 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 121 QQDPSSCHHQGAHRDH 74
           QQ PSS H Q  H+ H
Sbjct: 268 QQHPSSQHQQPTHQTH 283


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 395 FPEPNSYPEVRIAVAS*LASKKVGGRRPISLATLMMCFPYNL 520
           +P PN YP++   V + L  +KV   R  S  T +M   Y L
Sbjct: 14  YPTPNGYPQINGEVDAPLDFRKVESLRRNSTDTGIMDQQYCL 55



 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 121 QQDPSSCHHQGAHRDH 74
           QQ PSS H Q  H+ H
Sbjct: 268 QQHPSSQHQQPTHQTH 283


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 395 FPEPNSYPEVRIAVAS*LASKKVGGRRPISLATLMMCFPYNL 520
           +P PN YP++   V + L  +KV   R  S  T +M   Y L
Sbjct: 14  YPTPNGYPQINGEVDAPLDFRKVESLRRNSTDTGIMDQQYCL 55


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 130 PHVQQDPSSCHHQGAHRDH 74
           PHVQQ   S HH   H  H
Sbjct: 129 PHVQQHHPSVHHPAHHPLH 147


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/47 (23%), Positives = 20/47 (42%)
 Frame = +2

Query: 341  GKSDWAYETTDLNLL*MIFPEPNSYPEVRIAVAS*LASKKVGGRRPI 481
            G+S+W Y      ++    PE NS  ++     +   +K V    P+
Sbjct: 1508 GRSNWRYNNMRTGVISTAIPEANSEEDIVPPAPATATTKSVEREEPV 1554


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 121 QQDPSSCHHQGAHRDH 74
           QQ PSS H Q  H+ H
Sbjct: 220 QQHPSSQHQQPTHQTH 235


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 442 LTCVQESRWETSDLISNTNDVLSVQSLQDTARFISH 549
           L C  E   E  +L    +D   +Q L+D   F+S+
Sbjct: 621 LNCPVELSIENHNLTVIASDGFGIQPLEDLGSFVSY 656


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,807
Number of Sequences: 2352
Number of extensions: 14464
Number of successful extensions: 93
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)