SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l21r
         (743 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D16562-1|BAA03996.1|  298|Homo sapiens ATP synthase gamma-subuni...   268   1e-71
D16561-2|BAA03995.1|  298|Homo sapiens ATP synthase gamma-subuni...   268   1e-71
CR457403-1|CAG33684.1|  298|Homo sapiens ATP5C1 protein.              268   1e-71
BC026049-1|AAH26049.1|  291|Homo sapiens Unknown (protein for IM...   268   1e-71
BC020824-1|AAH20824.1|  298|Homo sapiens ATP synthase, H+ transp...   268   1e-71
BC016812-1|AAH16812.1|  298|Homo sapiens ATP synthase, H+ transp...   268   1e-71
BC013394-1|AAH13394.1|  298|Homo sapiens ATP synthase, H+ transp...   268   1e-71
BC000931-1|AAH00931.1|  298|Homo sapiens ATP synthase, H+ transp...   268   1e-71
BC000470-1|AAH00470.1|  298|Homo sapiens ATP synthase, H+ transp...   268   1e-71
AL353754-3|CAH73453.1|  298|Homo sapiens ATP synthase, H+ transp...   268   1e-71
AL158044-8|CAI12960.1|  298|Homo sapiens ATP synthase, H+ transp...   268   1e-71
D16563-1|BAA03997.1|  297|Homo sapiens ATP synthase gamma-subuni...   266   8e-71
D16561-1|BAA03994.1|  297|Homo sapiens ATP synthase gamma-subuni...   266   8e-71
AL353754-4|CAH73454.1|  297|Homo sapiens ATP synthase, H+ transp...   266   8e-71
AL158044-9|CAI12961.1|  297|Homo sapiens ATP synthase, H+ transp...   266   8e-71
X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain poly...    30   7.6  
U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2 pr...    30   7.6  
U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2 pr...    30   7.6  
U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy cha...    30   7.6  
AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down synd...    30   7.6  
AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhe...    30   7.6  
AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhe...    30   7.6  
AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell adhe...    30   7.6  
AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhe...    30   7.6  
AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhe...    30   7.6  

>D16562-1|BAA03996.1|  298|Homo sapiens ATP synthase gamma-subunit
           protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>D16561-2|BAA03995.1|  298|Homo sapiens ATP synthase gamma-subunit
           protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>CR457403-1|CAG33684.1|  298|Homo sapiens ATP5C1 protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>BC026049-1|AAH26049.1|  291|Homo sapiens Unknown (protein for
           IMAGE:4908447) protein.
          Length = 291

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 60  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 119

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 120 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 179

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 180 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 239

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 240 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 291


>BC020824-1|AAH20824.1|  298|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, gamma
           polypeptide 1 protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>BC016812-1|AAH16812.1|  298|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, gamma
           polypeptide 1 protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>BC013394-1|AAH13394.1|  298|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, gamma
           polypeptide 1 protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>BC000931-1|AAH00931.1|  298|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, gamma
           polypeptide 1 protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>BC000470-1|AAH00470.1|  298|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, gamma
           polypeptide 1 protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>AL353754-3|CAH73453.1|  298|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, gamma
           polypeptide 1 protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>AL158044-8|CAI12960.1|  298|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, gamma
           polypeptide 1 protein.
          Length = 298

 Score =  268 bits (657), Expect = 1e-71
 Identities = 124/232 (53%), Positives = 174/232 (75%), Gaps = 2/232 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 52
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298


>D16563-1|BAA03997.1|  297|Homo sapiens ATP synthase gamma-subunit
           protein.
          Length = 297

 Score =  266 bits (651), Expect = 8e-71
 Identities = 123/231 (53%), Positives = 173/231 (74%), Gaps = 2/231 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 55
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297


>D16561-1|BAA03994.1|  297|Homo sapiens ATP synthase gamma-subunit
           protein.
          Length = 297

 Score =  266 bits (651), Expect = 8e-71
 Identities = 123/231 (53%), Positives = 173/231 (74%), Gaps = 2/231 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 55
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297


>AL353754-4|CAH73454.1|  297|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, gamma
           polypeptide 1 protein.
          Length = 297

 Score =  266 bits (651), Expect = 8e-71
 Identities = 123/231 (53%), Positives = 173/231 (74%), Gaps = 2/231 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 55
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297


>AL158044-9|CAI12961.1|  297|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, gamma
           polypeptide 1 protein.
          Length = 297

 Score =  266 bits (651), Expect = 8e-71
 Identities = 123/231 (53%), Positives = 173/231 (74%), Gaps = 2/231 (0%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA--E 568
           R YG G++  YE+A++  PED  K L + ++SDRGLCGA+H+ ++K +++ ++   A  +
Sbjct: 67  RIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGK 126

Query: 567 NIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKII 388
            + ++ +GDK RGIL R +    +    E+GR PPTF DAS +A  +L SGYEF  G II
Sbjct: 127 EVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSII 186

Query: 387 YNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGA 208
           +NKF+SV+SY   + P+++  ++ SA  ++ YD +D+DVLQ+Y E++LA++++Y+LKE  
Sbjct: 187 FNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKEST 246

Query: 207 CSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 55
            SEQS+RMTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 247 TSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297


>X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain
           polypeptide protein.
          Length = 1640

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 596 RITLDTPVCTAPHKPLSEVIATN 664
           RI+ DT   TAPHKP S +I  N
Sbjct: 297 RISADTIFVTAPHKPTSGIIGVN 319


>U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2
           protein.
          Length = 1569

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 596 RITLDTPVCTAPHKPLSEVIATN 664
           RI+ DT   TAPHKP S +I  N
Sbjct: 297 RISADTIFVTAPHKPTSGIIGVN 319


>U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2
           protein.
          Length = 1626

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 596 RITLDTPVCTAPHKPLSEVIATN 664
           RI+ DT   TAPHKP S +I  N
Sbjct: 297 RISADTIFVTAPHKPTSGIIGVN 319


>U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy chain
           protein.
          Length = 1640

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 596 RITLDTPVCTAPHKPLSEVIATN 664
           RI+ DT   TAPHKP S +I  N
Sbjct: 297 RISADTIFVTAPHKPTSGIIGVN 319


>AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down
           syndrome cell adhesion molecule protein.
          Length = 1029

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -3

Query: 300 TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 151
           T   SL+ D L+ YT +S+  L F    +G  SEQ    T  D     AG
Sbjct: 162 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 211


>AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhesion
            molecule splice variant protein.
          Length = 1746

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -3

Query: 300  TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 151
            T   SL+ D L+ YT +S+  L F    +G  SEQ    T  D     AG
Sbjct: 897  TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 946


>AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhesion
            molecule protein.
          Length = 2012

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -3

Query: 300  TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 151
            T   SL+ D L+ YT +S+  L F    +G  SEQ    T  D     AG
Sbjct: 1145 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 1194


>AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell adhesion
            molecule protein.
          Length = 1571

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -3

Query: 300  TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 151
            T   SL+ D L+ YT +S+  L F    +G  SEQ    T  D     AG
Sbjct: 1145 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 1194


>AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhesion
            molecule protein.
          Length = 1896

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -3

Query: 300  TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 151
            T   SL+ D L+ YT +S+  L F    +G  SEQ    T  D     AG
Sbjct: 1131 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 1180


>AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhesion
            molecule isoform CHD2-42 precursor variant protein.
          Length = 2023

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -3

Query: 300  TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 151
            T   SL+ D L+ YT +S+  L F    +G  SEQ    T  D     AG
Sbjct: 1156 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 1205


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,774,101
Number of Sequences: 237096
Number of extensions: 2026046
Number of successful extensions: 5028
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5011
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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