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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l21r
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-4|AAK68562.1|  299|Caenorhabditis elegans Hypothetical ...   268   4e-72
AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical ...   184   8e-47
AC084158-5|AAO21417.1|  200|Caenorhabditis elegans Hypothetical ...   101   4e-22
Z82089-1|CAB05002.1|  983|Caenorhabditis elegans Hypothetical pr...    32   0.37 
Z81511-2|CAB04167.1|  983|Caenorhabditis elegans Hypothetical pr...    32   0.37 
Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related p...    31   1.1  
AF043700-6|AAB97569.2|  443|Caenorhabditis elegans Hypothetical ...    30   2.0  
AL132902-6|CAC14421.1|  316|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AL021180-1|CAA15980.1|  383|Caenorhabditis elegans Hypothetical ...    29   4.6  
AF303252-1|AAG50210.1|  383|Caenorhabditis elegans 3E324 protein.      29   4.6  
Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z66499-6|CAA91299.2|  765|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U58745-2|AAU05593.1|  569|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U58745-1|AAB00620.2|  574|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>AC084158-4|AAK68562.1|  299|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18a protein.
          Length = 299

 Score =  268 bits (656), Expect = 4e-72
 Identities = 134/233 (57%), Positives = 169/233 (72%), Gaps = 4/233 (1%)
 Frame = -3

Query: 741 RPYGEGAVQFYER----AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPG 574
           R YG GA  F++      E    ++  KQ+ V +TSDRGLCG VH+ + K  +N L+  G
Sbjct: 67  RAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAG 126

Query: 573 AENIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGK 394
            + I+V+ +GDKSR  LQRLY   I+   NEIGR PP+F DAS  A AIL SGY+F +G 
Sbjct: 127 DKEIRVVAIGDKSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGT 186

Query: 393 IIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKE 214
           I++N+FK+VVSY  S L +   ++I++   L+ YDS+D DVLQSY+E+SLA L++Y +KE
Sbjct: 187 ILFNRFKTVVSYETSKLQILPLEAIKAKEALSTYDSVDDDVLQSYSEYSLAQLIYYGMKE 246

Query: 213 GACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 55
            A SEQSSRMTAMD ASKNAGEMIDKLTL FNRTRQAVITRELIEIISGAA +
Sbjct: 247 SATSEQSSRMTAMDGASKNAGEMIDKLTLAFNRTRQAVITRELIEIISGAACV 299


>AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18b protein.
          Length = 313

 Score =  184 bits (447), Expect = 8e-47
 Identities = 90/185 (48%), Positives = 124/185 (67%), Gaps = 4/185 (2%)
 Frame = -3

Query: 741 RPYGEGAVQFYER----AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPG 574
           R YG GA  F++      E    ++  KQ+ V +TSDRGLCG VH+ + K  +N L+  G
Sbjct: 67  RAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAG 126

Query: 573 AENIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGK 394
            + I+V+ +GDKSR  LQRLY   I+   NEIGR PP+F DAS  A AIL SGY+F +G 
Sbjct: 127 DKEIRVVAIGDKSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGT 186

Query: 393 IIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKE 214
           I++N+FK+VVSY  S L +   ++I++   L+ YDS+D DVLQSY+E+SLA L++Y +KE
Sbjct: 187 ILFNRFKTVVSYETSKLQILPLEAIKAKEALSTYDSVDDDVLQSYSEYSLAQLIYYGMKE 246

Query: 213 GACSE 199
            A SE
Sbjct: 247 SATSE 251


>AC084158-5|AAO21417.1|  200|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18c protein.
          Length = 200

 Score =  101 bits (243), Expect = 4e-22
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
 Frame = -3

Query: 741 RPYGEGAVQFYER----AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPG 574
           R YG GA  F++      E    ++  KQ+ V +TSDRGLCG VH+ + K  +N L+  G
Sbjct: 67  RAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAG 126

Query: 573 AENIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAIL 424
            + I+V+ +GDKSR  LQRLY   I+   NEIGR PP+F DAS  A AIL
Sbjct: 127 DKEIRVVAIGDKSRAGLQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176


>Z82089-1|CAB05002.1|  983|Caenorhabditis elegans Hypothetical
           protein ZK270.1 protein.
          Length = 983

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = -3

Query: 426 LTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL-TAYDSLDSDVLQSYTEF 250
           +  GYEFGS +I  N+ +  ++  + ++  + +      SK   A   + SD LQ YT  
Sbjct: 482 IVGGYEFGSDEIDKNRMEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYTHL 541

Query: 249 SLASLLFYAL 220
               L+F ++
Sbjct: 542 MTTPLVFVSV 551


>Z81511-2|CAB04167.1|  983|Caenorhabditis elegans Hypothetical
           protein ZK270.1 protein.
          Length = 983

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = -3

Query: 426 LTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL-TAYDSLDSDVLQSYTEF 250
           +  GYEFGS +I  N+ +  ++  + ++  + +      SK   A   + SD LQ YT  
Sbjct: 482 IVGGYEFGSDEIDKNRMEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYTHL 541

Query: 249 SLASLLFYAL 220
               L+F ++
Sbjct: 542 MTTPLVFVSV 551


>Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical
           protein C08B11.6 protein.
          Length = 418

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 466 WETSDLI-SNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVY-SSAQT 639
           W+T   I   T   + V++         +   +  L    +E + D+FG+T V+ +SA T
Sbjct: 71  WDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSAST 130

Query: 640 SVRGHSNK 663
            V  HSNK
Sbjct: 131 LVAKHSNK 138


>U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related
           protein-like protein.
          Length = 418

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +1

Query: 466 WETSDLI-SNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVY-SSAQT 639
           W+T   I   T   + V++         +   +  L    +E + D+FG+T V+ +SA T
Sbjct: 71  WDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSAST 130

Query: 640 SVRGHSNK 663
            V  HSNK
Sbjct: 131 LVAKHSNK 138


>AF043700-6|AAB97569.2|  443|Caenorhabditis elegans Hypothetical
           protein K09H9.2 protein.
          Length = 443

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -3

Query: 741 RPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR 595
           RP+ +   +   + E +P   DP   F+ ++ D  + GA   G S  IR
Sbjct: 67  RPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115


>AL132902-6|CAC14421.1|  316|Caenorhabditis elegans Hypothetical
           protein Y71A12B.6 protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 398 ERSFTTSSSLWSRTPSPTCP 339
           E   T S+SLW+ TP P CP
Sbjct: 124 EFDITVSNSLWTFTPVPACP 143


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +1

Query: 451  VQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHL-DVLSTRFAETVADHFGY 612
            V +S     DL +NT+ +    S + T    + T+   D  S R   T+ D FGY
Sbjct: 2425 VLKSSISLDDLFNNTSGIEKTTSEKTTTTTTTRTETTTDTYSKRSTSTLVDRFGY 2479


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +1

Query: 451  VQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHL-DVLSTRFAETVADHFGY 612
            V +S     DL +NT+ +    S + T    + T+   D  S R   T+ D FGY
Sbjct: 2425 VLKSSISLDDLFNNTSGIEKTTSEKTTTTTTTRTETTTDTYSKRSTSTLVDRFGY 2479


>AL021180-1|CAA15980.1|  383|Caenorhabditis elegans Hypothetical
           protein Y44F5A.1 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/42 (45%), Positives = 21/42 (50%)
 Frame = -3

Query: 555 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 430
           +CV D   G   R   K   SV   I  LPPT L + QLATA
Sbjct: 75  LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116


>AF303252-1|AAG50210.1|  383|Caenorhabditis elegans 3E324 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/42 (45%), Positives = 21/42 (50%)
 Frame = -3

Query: 555 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 430
           +CV D   G   R   K   SV   I  LPPT L + QLATA
Sbjct: 75  LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116


>Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical
           protein C54G4.2 protein.
          Length = 423

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 433 SGQLTCVQESRWETSDLISNTNDVLSVQSLQDTARFISH 549
           S  +T   ES  +TSDLIS+  D    +      +F+SH
Sbjct: 64  SASITPSTESTMKTSDLISSIGDHTEGEPSNGNTKFVSH 102


>Z66499-6|CAA91299.2|  765|Caenorhabditis elegans Hypothetical
           protein T01B7.6 protein.
          Length = 765

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = +2

Query: 536 DLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGVTSALS 709
           D   T    M +  G LR   +   TPV     +PL      +N LGSS G ++S  S
Sbjct: 544 DFKMTSSIPMTNGLGHLRLGSVWSGTPVEAKQEEPLHYFQQQDNFLGSSFGPISSTFS 601


>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 468 PPTFLDASQLATAILTSGYEFGSGKI 391
           PPTF D  + A  +   GY FG  KI
Sbjct: 3   PPTFADLGKSAKDLFNKGYNFGFLKI 28


>U58745-2|AAU05593.1|  569|Caenorhabditis elegans Hypothetical
           protein C10G6.1b protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -3

Query: 678 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 565
           +PK+L   +  +RGL       VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266


>U58745-1|AAB00620.2|  574|Caenorhabditis elegans Hypothetical
           protein C10G6.1a protein.
          Length = 574

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -3

Query: 678 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 565
           +PK+L   +  +RGL       VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,698,651
Number of Sequences: 27780
Number of extensions: 310577
Number of successful extensions: 1018
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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