BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l21f (636 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821... 66 3e-11 07_03_0571 - 19602755-19603831 62 5e-10 11_02_0119 - 8502455-8503015,8503311-8504009,8504512-8504571,850... 31 0.58 03_06_0737 + 35879723-35879990,35880105-35880201,35880464-358805... 29 3.1 08_02_0730 - 20472851-20473075,20473332-20474285 27 9.4 05_06_0223 - 26525618-26526112,26526203-26526370,26526649-265274... 27 9.4 03_05_0287 + 22759946-22760836 27 9.4 >10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412, 8216712-8216864,8217456-8217569,8217649-8217776, 8219004-8219099,8219479-8219601,8219694-8219810, 8219983-8220104,8220439-8220508 Length = 368 Score = 65.7 bits (153), Expect = 3e-11 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%) Frame = +3 Query: 195 KAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPEDD 374 +A+ R+KSV+NIQKIT++MKMV+A+K + + +R + F P D Sbjct: 60 RALRTRMKSVRNIQKITKAMKMVAASKLRAVQIRTENSRGLWQ---PFTALLGDVPSVDV 116 Query: 375 PKQLFVAMTSDRGLCGAVHT---GVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGK 545 K + VA+TSD+GLCG +++ VSK + S P E+ K + +G+K + L R Sbjct: 117 KKNVIVAITSDKGLCGGINSTSVKVSKALHKLTSGPEKES-KYVILGEKGKVQLIRDSKD 175 Query: 546 HIISVANEIGRLP 584 +I +E+ + P Sbjct: 176 NIEMTVSELQKNP 188 >07_03_0571 - 19602755-19603831 Length = 358 Score = 61.7 bits (143), Expect = 5e-10 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 13/128 (10%) Frame = +3 Query: 189 TLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTPP 365 +L+ + R+ SV+N QKIT++MK+V+AAK RA+ + ++RP+ E V+ Y + Sbjct: 37 SLRELRSRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQT 96 Query: 366 ED----------DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVGD 509 ED K V +T +RGLCG+ + V K R+ E ++ V+ VG Sbjct: 97 EDIDLPLTRIRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIEELKQLGLEYTVVSVGK 156 Query: 510 KSRGILQR 533 K R Sbjct: 157 KGNAYFIR 164 >11_02_0119 - 8502455-8503015,8503311-8504009,8504512-8504571, 8504744-8504800 Length = 458 Score = 31.5 bits (68), Expect = 0.58 Identities = 21/79 (26%), Positives = 35/79 (44%) Frame = -2 Query: 581 ETSDLISNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVYSSAQTSVR 402 E ++ SN ++ L ++ D S + LDVL + VAD + + +A+ + Sbjct: 105 EVAECESNAHNDLEQITMDDIGELYSLCEELDVLDDDSSSWVADPWSSFQLVPTAEATDV 164 Query: 401 GHSNKQLLGVIFGRCNLSP 345 + LG I G C SP Sbjct: 165 DDAVVAALGAIDGSCRPSP 183 >03_06_0737 + 35879723-35879990,35880105-35880201,35880464-35880591, 35880686-35880767,35880855-35880918,35880930-35881022, 35881120-35881178,35881391-35881826,35882050-35882120, 35882201-35882351 Length = 482 Score = 29.1 bits (62), Expect = 3.1 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = -3 Query: 472 GSLRRLRITLDTPVCTAPHKPLSEVIAT---NNCLGSSSGGVTSA 347 GSL+R R++ PH S I + C+GSS G TSA Sbjct: 337 GSLQRNRVSYQVDSLMLPHPDPSHAICLPSHDTCMGSSGHGSTSA 381 >08_02_0730 - 20472851-20473075,20473332-20474285 Length = 392 Score = 27.5 bits (58), Expect = 9.4 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = -2 Query: 560 NTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYT 435 ++ DV+ + SL+D A FI H L + + + + +H +T Sbjct: 346 DSQDVVPIDSLEDEALFIGHNGTLCLSTKDYPALLPNHVYFT 387 >05_06_0223 - 26525618-26526112,26526203-26526370,26526649-26527473, 26527898-26528004,26529701-26529767 Length = 553 Score = 27.5 bits (58), Expect = 9.4 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 13/97 (13%) Frame = -2 Query: 497 DHLDVLSTRFAETVADHF---------GYTSVYSSAQTSVR---GHSNKQLLGV-IFGRC 357 D+L ++S A V D F + SV T++R GH +++L V I G C Sbjct: 369 DYLSLVSVLHASPVLDTFILSVQQGGMKHDSVSGDTTTNLRTMPGHKHERLKEVMIIGFC 428 Query: 356 NLSPFIELYCTFTIGTSSFQVTLSTGVFSS*HHLHGL 246 + + +EL C T+S + T++ H L + Sbjct: 429 SATSMVELTCHILENTTSLE-TITLDAVCDVHDLENI 464 >03_05_0287 + 22759946-22760836 Length = 296 Score = 27.5 bits (58), Expect = 9.4 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +3 Query: 282 RAERDLKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGL 416 R+ DLK P+ G + ERA + ++DP +FV D G+ Sbjct: 223 RSVIDLKPVLPWPIGKPKGKERACLAVVDEDPDVIFVGTEEDDGV 267 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,629,494 Number of Sequences: 37544 Number of extensions: 445724 Number of successful extensions: 1255 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1193 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1253 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1561213104 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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