BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l21f (636 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 171 3e-43 AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 171 3e-43 AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 168 3e-42 Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 31 0.91 U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 31 0.91 AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 30 1.2 Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 3.7 Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 3.7 AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 29 3.7 AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 29 3.7 Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical pr... 28 4.9 Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical pr... 28 4.9 Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 28 6.4 U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 28 6.4 U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 28 6.4 >AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical protein Y69A2AR.18a protein. Length = 299 Score = 171 bits (417), Expect = 3e-43 Identities = 89/157 (56%), Positives = 109/157 (69%), Gaps = 4/157 (2%) Frame = +3 Query: 177 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 347 R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++ Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82 Query: 348 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 524 E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142 Query: 525 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSG 635 LQRLY I+ NEIGR PP+F DAS A AIL SG Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSG 179 >AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical protein Y69A2AR.18b protein. Length = 313 Score = 171 bits (417), Expect = 3e-43 Identities = 89/157 (56%), Positives = 109/157 (69%), Gaps = 4/157 (2%) Frame = +3 Query: 177 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 347 R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++ Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82 Query: 348 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 524 E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142 Query: 525 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSG 635 LQRLY I+ NEIGR PP+F DAS A AIL SG Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSG 179 >AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical protein Y69A2AR.18c protein. Length = 200 Score = 168 bits (408), Expect = 3e-42 Identities = 87/154 (56%), Positives = 107/154 (69%), Gaps = 4/154 (2%) Frame = +3 Query: 177 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 347 R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++ Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82 Query: 348 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 524 E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142 Query: 525 LQRLYGKHIISVANEIGRLPPTFLDASQLATAIL 626 LQRLY I+ NEIGR PP+F DAS A AIL Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176 >Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical protein C08B11.6 protein. Length = 418 Score = 30.7 bits (66), Expect = 0.91 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Frame = -2 Query: 584 WETSDLI-SNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVY-SSAQT 411 W+T I T + V++ + + L +E + D+FG+T V+ +SA T Sbjct: 71 WDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSAST 130 Query: 410 SVRGHSNK 387 V HSNK Sbjct: 131 LVAKHSNK 138 >U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related protein-like protein. Length = 418 Score = 30.7 bits (66), Expect = 0.91 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Frame = -2 Query: 584 WETSDLI-SNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVY-SSAQT 411 W+T I T + V++ + + L +E + D+FG+T V+ +SA T Sbjct: 71 WDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSAST 130 Query: 410 SVRGHSNK 387 V HSNK Sbjct: 131 LVAKHSNK 138 >AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical protein K09H9.2 protein. Length = 443 Score = 30.3 bits (65), Expect = 1.2 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +3 Query: 297 LKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR 455 L RP+ + + + E +P DP F+ ++ D + GA G S IR Sbjct: 63 LSKNRPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115 >Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein T04F3.1 protein. Length = 3517 Score = 28.7 bits (61), Expect = 3.7 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 599 VQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHL-DVLSTRFAETVADHFGY 438 V +S DL +NT+ + S + T + T+ D S R T+ D FGY Sbjct: 2425 VLKSSISLDDLFNNTSGIEKTTSEKTTTTTTTRTETTTDTYSKRSTSTLVDRFGY 2479 >Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein T04F3.1 protein. Length = 3517 Score = 28.7 bits (61), Expect = 3.7 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 599 VQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHL-DVLSTRFAETVADHFGY 438 V +S DL +NT+ + S + T + T+ D S R T+ D FGY Sbjct: 2425 VLKSSISLDDLFNNTSGIEKTTSEKTTTTTTTRTETTTDTYSKRSTSTLVDRFGY 2479 >AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical protein Y44F5A.1 protein. Length = 383 Score = 28.7 bits (61), Expect = 3.7 Identities = 19/42 (45%), Positives = 21/42 (50%) Frame = +3 Query: 495 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 620 +CV D G R K SV I LPPT L + QLATA Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116 >AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. Length = 383 Score = 28.7 bits (61), Expect = 3.7 Identities = 19/42 (45%), Positives = 21/42 (50%) Frame = +3 Query: 495 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 620 +CV D G R K SV I LPPT L + QLATA Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116 >Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical protein K01D12.1 protein. Length = 314 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -1 Query: 132 PVRSVPTFCKFYGCLSVKFTSRRKN 58 PV PTF FY C+ K S R N Sbjct: 52 PVEGTPTFKAFYNCVYPKLASLRGN 76 >Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical protein C54G4.2 protein. Length = 423 Score = 28.3 bits (60), Expect = 4.9 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -2 Query: 617 SGQLTCVQESRWETSDLISNTNDVLSVQSLQDTARFISH 501 S +T ES +TSDLIS+ D + +F+SH Sbjct: 64 SASITPSTESTMKTSDLISSIGDHTEGEPSNGNTKFVSH 102 >Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical protein T01B7.6 protein. Length = 765 Score = 27.9 bits (59), Expect = 6.4 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = -3 Query: 514 DLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGVTSALS 341 D T M + G LR + TPV +PL +N LGSS G ++S S Sbjct: 544 DFKMTSSIPMTNGLGHLRLGSVWSGTPVEAKQEEPLHYFQQQDNFLGSSFGPISSTFS 601 >U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical protein C10G6.1b protein. Length = 569 Score = 27.9 bits (59), Expect = 6.4 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +3 Query: 372 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 485 +PK+L + +RGL VS +++NRL+E G+EN Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266 >U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical protein C10G6.1a protein. Length = 574 Score = 27.9 bits (59), Expect = 6.4 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +3 Query: 372 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 485 +PK+L + +RGL VS +++NRL+E G+EN Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,185,495 Number of Sequences: 27780 Number of extensions: 363030 Number of successful extensions: 925 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 895 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 922 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1406256614 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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