Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l19r
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.5  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   4.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 285 LITDGRNHYHQIFQVCIHHH 344
           LI DG+    QI  +CI  H
Sbjct: 501 LIVDGKKSEEQIVDICIRSH 520


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 258 DISDPVQLSRQWIALQQMRSKMKRKVDTKATK 163
           +I++ ++L+ + I +     +MK K DTK T+
Sbjct: 215 EIAESLRLTERQIKIWFQNRRMKAKKDTKFTE 246


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 258 DISDPVQLSRQWIALQQMRSKMKRKVDTKATK 163
           +I++ ++L+ + I +     +MK K DTK T+
Sbjct: 215 EIAESLRLTERQIKIWFQNRRMKAKKDTKFTE 246


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 143 TYLIFRPFVALVSTFLFILLLICCRAIH 226
           +Y++F    AL +TF  ILL++ C  +H
Sbjct: 259 SYILF----ALFNTFGTILLIMTCSGVH 282


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 258 DISDPVQLSRQWIALQQMRSKMKRKVDTKATK 163
           +I++ ++L+ + I +     +MK K DTK T+
Sbjct: 215 EIAESLRLTERQIKIWFQNRRMKAKKDTKFTE 246


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 399 SKAVNNDNDSEKVTKNRKDDDEYIPEIFDDN 307
           S +V+N N SEK +  +  DD +     D N
Sbjct: 252 SHSVDNSNSSEKKSSIQHGDDAHKTHHLDKN 282


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 381 DNDSEKVTKNRKDDDEYIPEIFDDND 304
           D + E    +R DDDE I    DD D
Sbjct: 25  DEEVEHRLSDRDDDDENITVDDDDTD 50


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 8   TSPPSPVLLCSNIFPNKE 61
           TSPPSP+L  SN F   E
Sbjct: 132 TSPPSPIL--SNRFGENE 147


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 151 NLPAFCSFSIHFPFHL 198
           N P F  F  HF FH+
Sbjct: 662 NNPGFWLFHCHFLFHI 677


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 303 NHYHQIFQVCIHHH 344
           +H+HQ   V  HHH
Sbjct: 13  SHHHQSGSVAGHHH 26


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 538 SFFIPFLNRCISEWFEGFM 594
           SFF  FLN C+ + +  F+
Sbjct: 166 SFFKTFLNSCLMDVYYEFL 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,416
Number of Sequences: 336
Number of extensions: 3662
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)