Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10l19r
(723 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23905| Best HMM Match : Sigma70_ner (HMM E-Value=0.4) 87 2e-17
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 33 0.23
SB_25550| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_31341| Best HMM Match : UDP-g_GGTase (HMM E-Value=0) 31 0.72
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 31 0.72
SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11) 31 0.95
SB_44597| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_57821| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_5412| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_4536| Best HMM Match : Krr1 (HMM E-Value=4) 31 1.2
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 30 1.7
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 30 1.7
SB_8241| Best HMM Match : PDEase_I (HMM E-Value=0) 30 1.7
SB_20780| Best HMM Match : DUF854 (HMM E-Value=5.1) 30 1.7
SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 30 2.2
SB_5796| Best HMM Match : RIO1 (HMM E-Value=0) 30 2.2
SB_45349| Best HMM Match : rve (HMM E-Value=6.1e-31) 29 2.9
SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) 29 2.9
SB_37432| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_4644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_55835| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_53345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_39173| Best HMM Match : DUF689 (HMM E-Value=3.1) 28 6.7
SB_39059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_25259| Best HMM Match : PhdYeFM (HMM E-Value=6.6) 28 6.7
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_10387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_40237| Best HMM Match : TPR_2 (HMM E-Value=0.00034) 28 6.7
SB_25164| Best HMM Match : FMN_dh (HMM E-Value=3.1e-13) 28 6.7
SB_16983| Best HMM Match : SNARE (HMM E-Value=1.9) 28 6.7
SB_12900| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_58883| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 28 8.8
SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) 28 8.8
SB_7753| Best HMM Match : RVT_1 (HMM E-Value=0.089) 28 8.8
SB_56851| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_47302| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.8
>SB_23905| Best HMM Match : Sigma70_ner (HMM E-Value=0.4)
Length = 322
Score = 86.6 bits (205), Expect = 2e-17
Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Frame = -1
Query: 723 PSDTEEDESPV-SKNTNESKKSNAPANLPKKRKLD----DYEKEISISHKAFKPFRDASI 559
PSD+E++E+ ++ S L KRK + ++ + IS HKAF+ F+D++I
Sbjct: 161 PSDSEDEENGADTEKIPNSSTEKEGLKLSSKRKAELTAQEFGECISKRHKAFQGFQDSTI 220
Query: 558 QKWNEKTRLATASNIKNAPTNTVLQQISYILSDRDKLIRRTQLKRTEYDIVGYSKAVNND 379
KW+EKTRLA + + N IL+D+D+LI+RTQLKR+ Y +G + +
Sbjct: 221 SKWSEKTRLA-SGKVNNK-----------ILNDKDRLIKRTQLKRSSYRALGKATETLCE 268
Query: 378 NDSEKVTKNRKDD-DEYIPEIFDDNDFYHQL 289
+++++ +Y P++FDD+DFYHQ+
Sbjct: 269 TENQQLESTADAHLKDYDPQVFDDDDFYHQV 299
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 33.1 bits (72), Expect = 0.23
Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = -1
Query: 723 PSDTEEDESPVSKNTNESKKSNAPANLPKKRKLDDYEKEIS-ISHKAFKPFRDASIQKWN 547
P E +S + K+N ++ + +D+ + +S + K + RD +KW+
Sbjct: 558 PEGLPEVKSSPDVTSELQDKANRNEDISWRNTVDESKDRLSKLRIKLQRIQRDKRNRKWS 617
Query: 546 EKTRLATASNI-KNAPTNTV-LQQISYILSDRDKLIRRTQ-LKRTEYDIVGYSKAVNNDN 376
+ K P ++ L ++ L D + L++ T ++R D+ Y + + N N
Sbjct: 618 ILDAIKEVFGFGKREPKPSIQLDRLIERLEDHEDLMQETSSVQRPANDLRSYGETIRNSN 677
Query: 375 DSEKVTKNRKDD 340
+ ++ + R DD
Sbjct: 678 ELDEANEARVDD 689
>SB_25550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 531 ATASNIKNAPTNTV-LQQISYILS-DRDKLIRRTQLKRTEYDIVGYSKAVNNDNDSEKVT 358
+T S++ TNT L ++ +L +++ IRR Q + +YD + +D+D E
Sbjct: 30 STQSSVYVRMTNTTNLAEVENVLGKSKEEKIRRIQ--KVDYDNDDDNGGGYSDDDDEYDD 87
Query: 357 KNRKDDDEYIPEIFDDND 304
+ DDD+Y +DD+D
Sbjct: 88 GDYDDDDDYDDGDYDDDD 105
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 390 VNNDNDSEKVTKNRKDDDEYIPEIFDDNDFY 298
V+ DND + DDDEY +DD+D Y
Sbjct: 66 VDYDNDDDNGGGYSDDDDEYDDGDYDDDDDY 96
>SB_31341| Best HMM Match : UDP-g_GGTase (HMM E-Value=0)
Length = 1031
Score = 31.5 bits (68), Expect = 0.72
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 432 LKRTEYDIVGYSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDNDFYHQLLRELIECKSADI 253
+K+TEY V +K V D K+T ++DDDE +F H L E + + +
Sbjct: 129 VKKTEYKAVDDTK-VKEDTSHSKITSKKEDDDEVEGFLFGKLKKLHPHLTEQLNQFRSHL 187
Query: 252 SD 247
D
Sbjct: 188 KD 189
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/42 (28%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -1
Query: 441 RTQLKRTEYDIVGYSKAVNNDNDS-EKVTKNRKDDDEYIPEI 319
R +L++T+ D++ K ++N+ S + +TKN+++ D + +I
Sbjct: 1480 RVKLQKTKADLIAMQKELSNNQSSLDNITKNKENKDSTLADI 1521
>SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11)
Length = 1496
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Frame = -1
Query: 396 KAVNNDNDSEKVTKNRKDD---DEYIPEIFDDN 307
KAV+ND ++ T+N ++D ++YIPEI +D+
Sbjct: 559 KAVSNDEEARVGTENEEEDFQLEDYIPEIREDD 591
>SB_44597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 31.1 bits (67), Expect = 0.95
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 402 YSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDN 307
Y +V++DN+ E V + DDD I +++DD+
Sbjct: 115 YDDSVDDDNNIEDVYDDSVDDDNNIEDVYDDS 146
Score = 31.1 bits (67), Expect = 0.95
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 402 YSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDN 307
Y +V++DN+ E V + DDD I +++DD+
Sbjct: 143 YDDSVDDDNNIEVVCDDSVDDDNNIEDVYDDS 174
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -1
Query: 402 YSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDN 307
Y +V++D++ E V + DDD I +++DD+
Sbjct: 101 YDDSVDDDSNIEDVYDDSVDDDNNIEDVYDDS 132
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 402 YSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDN 307
Y V++DN+ E + DDD I +++DD+
Sbjct: 87 YDDIVDDDNNIEDYYDDSVDDDSNIEDVYDDS 118
>SB_57821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 7/133 (5%)
Frame = -1
Query: 723 PSDTEEDESPVS---KNTNESKKSNAPANLPKKRKLDDYEKEISISHKAFKP----FRDA 565
PSD++ S + E K+ L + ++DD ++E + ++ K +D
Sbjct: 350 PSDSDSKTSEYEYDGSSDEEPKRPERHVYLRRHYRIDDEDEEETEEDQSGKEDKKDTKDE 409
Query: 564 SIQKWNEKTRLATASNIKNAPTNTVLQQISYILSDRDKLIRRTQLKRTEYDIVGYSKAVN 385
++K + + N+ N L+ +++ K R E D G+S
Sbjct: 410 DMEKKDSRKSGEDDENVDNKKAEEKLKNGDHLVKTESKDAERAAESGNESDESGFSNQKP 469
Query: 384 NDNDSEKVTKNRK 346
+ DSEK K+++
Sbjct: 470 KEPDSEKDKKSKE 482
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 134 LCTTYLIFRPFVALVSTFLFILLLICCRAIHC 229
L T++IF PF+ + FL ++ CR HC
Sbjct: 1668 LYRTFVIFEPFICRIVPFLCRIVPYLCRIAHC 1699
>SB_5412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 402 YSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDN 307
Y +V++DN+ E V + DDD I +++DD+
Sbjct: 129 YDDSVDDDNNIEVVYDDSVDDDNNIEDVYDDS 160
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 402 YSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDN 307
Y +V++DN+ E V + DDD I ++DD+
Sbjct: 115 YDDSVDDDNNIEDVYDDSVDDDNNIEVVYDDS 146
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -1
Query: 402 YSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDN 307
Y +V++D++ E V + DDD I +++DD+
Sbjct: 101 YDDSVDDDSNLEDVYDDSVDDDNNIEDVYDDS 132
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 402 YSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDN 307
Y +V++DN+ E + DDD + +++DD+
Sbjct: 87 YDDSVDDDNNIEDYYDDSVDDDSNLEDVYDDS 118
>SB_4536| Best HMM Match : Krr1 (HMM E-Value=4)
Length = 246
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 405 GYSKAVNNDNDSEKVTK-NRKDDDEYIPEIFDDNDF 301
G S +ND+D+ + N DDD+ I +I DDND+
Sbjct: 6 GVSDVDDNDDDNGDINDDNDYDDDDNIGDINDDNDY 41
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 30.3 bits (65), Expect = 1.7
Identities = 32/159 (20%), Positives = 74/159 (46%)
Frame = -1
Query: 636 KRKLDDYEKEISISHKAFKPFRDASIQKWNEKTRLATASNIKNAPTNTVLQQISYILSDR 457
K+ L D +KE + K+ + + K+ K L + +++L+Q+S + S+
Sbjct: 1157 KQDLADVQKEHE-NLKSAVSISEGELLKF--KNTLQSEKEEFEKKLSSLLEQLSEMESEV 1213
Query: 456 DKLIRRTQLKRTEYDIVGYSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDNDFYHQLLREL 277
L + K E + + + N D + E++T ++ + + +F D D + L ++
Sbjct: 1214 SVLNKSCTEKTGEVEHLKRQLS-NRDEELEEMTSVKERIVDELTNLFTDRDTRVKELEQM 1272
Query: 276 IECKSADISDPVQLSRQWIALQQMRSKMKRKVDTKATKG 160
IE ++ + ++ + I +++++ K + VD KG
Sbjct: 1273 IEERAHEYGQ--EIEERNIVIRELQQKEEALVDALEEKG 1309
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Frame = -1
Query: 609 EISISHKAFKPFRDASIQKWNEKTRLATASNIKNAPTNTVLQQISYILSDR-----DKLI 445
E + + F+ + +AS E TR T N ++ T+ ++ I +++ D+L+
Sbjct: 546 EGNFRQEMFEKYGNASDALRREYTR--TGDNSRHDTLQTLKEKEGKIAANKSNFCEDELV 603
Query: 444 RRTQLKRTEYDIVGYSKAVNNDNDSEKVTKNRKDDDEYI 328
+ TQL+ + D+V + + S K+ K+ K+D E++
Sbjct: 604 KNTQLQTEDKDVVEIT-VEHLTETSSKIAKSPKEDYEHV 641
>SB_8241| Best HMM Match : PDEase_I (HMM E-Value=0)
Length = 388
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = -1
Query: 282 ELIECKSADISDPVQLSRQWIALQQMRSKMKRKVDTKATKGRKIKYVVHNQLVNYMAPEK 103
EL++ + D+ D ++ +RQW Q +++ + + A+ R + ++ PE
Sbjct: 267 ELVQPDAQDLLDTIEDNRQWYNSQIPKNEQDKTANNPASIRRSSWQGTRKEAIDQSEPE- 325
Query: 102 CLTWTEESTNELYNSLFGKMFEHN 31
+ EE +L NS HN
Sbjct: 326 -TSEEEEKKGKLQNSTQNPTTRHN 348
>SB_20780| Best HMM Match : DUF854 (HMM E-Value=5.1)
Length = 179
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 420 EYDIVGYSKAVNNDNDSEKVTKNRKD-DDEYI 328
+YD++GY V +DND++ ++ D DD+ I
Sbjct: 136 DYDVLGYDHEVKDDNDTDTDNDSKDDYDDDMI 167
>SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2324
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -1
Query: 387 NNDNDSEKVTKNRKDDDEYIPEIFDDNDFYHQLLRE-LIECKSADISDPVQLSRQWIALQ 211
++D D+ T N++DDD+ + DD+D +L E IE D + Q + I LQ
Sbjct: 486 DDDQDANDATVNQQDDDDDDDDDQDDDDEEQSILSEQAIE----DYNSQDQEAEYQIRLQ 541
Query: 210 QMRSKMKR 187
+ +++++R
Sbjct: 542 KQKNELER 549
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Frame = -1
Query: 684 NTNESKKSNAPANLPKKRKLDDYEKEISISHKAFKPFRDASIQKWNEKTRLATASNIKNA 505
N E K+ + L ++++ + E+ AF +D I K A A NA
Sbjct: 1508 NLLEEKERATESKLEAEQRVQELRAELG----AFVKEKDEIINGLKAKMDSALAEQSGNA 1563
Query: 504 PTNTVLQQISYILSDRDKLI--RRTQLKRTEYDIV----GYSKAVNNDNDSEKVTKNRKD 343
NT+LQ IL+DR + + + QL + +I+ +N+ D E + ++
Sbjct: 1564 --NTMLQDYERILADRTEELDEKMNQLSQANEEILVLMEDKDSLLNDLRDLENELRALRE 1621
Query: 342 DDEYIPEIFDD 310
D +Y+ + D+
Sbjct: 1622 DKDYLGKECDE 1632
>SB_5796| Best HMM Match : RIO1 (HMM E-Value=0)
Length = 1329
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 387 NNDNDSEKVTKNRKDDDEYIPEIFDDNDFY 298
+ +D EK T + ++DE+ PE + D DF+
Sbjct: 62 STSDDVEKSTPDAIEEDEFSPEEYSDEDFF 91
>SB_45349| Best HMM Match : rve (HMM E-Value=6.1e-31)
Length = 298
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 459 RDKLIRRTQLKRTEYDIVGYSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDND 304
R+KL +++ +DI K +NN+N++ N DDD+ + DD+D
Sbjct: 210 RNKLSQKSYADDKLFDI----KLINNNNNNNNNNNNNNDDDDDDDDDDDDDD 257
>SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)
Length = 631
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -1
Query: 723 PSDTEEDESPVSKNTNESKKSNAPANLPKKRKLDDYEKEISISHKAFKPFRDASIQKWN- 547
P E+ PVS+ K + PK ++ +EKE +H ++ WN
Sbjct: 173 PQPGSEEPEPVSQAPEPPKPKTSAPEPPKPGQMSGFEKECLDAHNMYRMRHGVPPLTWNS 232
Query: 546 EKTR 535
E TR
Sbjct: 233 ELTR 236
>SB_37432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1006
Score = 29.1 bits (62), Expect = 3.8
Identities = 33/148 (22%), Positives = 53/148 (35%), Gaps = 2/148 (1%)
Frame = -1
Query: 549 NEKTRLATASNIKNAPTNTVLQQISYILSDR-DKLIRRTQLKRTEYDIVGYSKAVNNDND 373
N T +T +N+ + T+ +I + S K +LK E V K N D
Sbjct: 645 NAATYFSTFANVSKSNMKTINGKIGHDSSSTWKKWAYEKRLKDAES--VKSFKEKNKIPD 702
Query: 372 SEKVTKNRKDDDEYIPEIFDDNDFYHQLLRELIECKSADISDPVQLSRQW-IALQQMRSK 196
K +RK EYI +FY L + + + + +QW + +
Sbjct: 703 GSKANNHRKKITEYIASNNSRQEFYPPLGKFVKYLYPEPLHNSNNAWQQWNLDVLNTAIH 762
Query: 195 MKRKVDTKATKGRKIKYVVHNQLVNYMA 112
+ K D G H+ L YM+
Sbjct: 763 LTNKADINKANGNITLLPKHSALAKYMS 790
>SB_4644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 402 YSKAVNNDNDSEKVTKNRKDDDE-YIPEIFDDND 304
Y + D D + K+ K+DDE Y ++ DD+D
Sbjct: 13 YGNEYHGDEDDDDDDKSSKEDDEIYCDDVIDDDD 46
>SB_55835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 714 TEEDESPVSKNTNESKKSNAPANLPKKRKLDDYEKEISISHKAFK 580
TE ES KN N KK+NA A + + R++ +S+S + K
Sbjct: 593 TEPQESD-QKNNNNKKKNNASAPISENRRVIHEPVSLSLSSRRTK 636
>SB_53345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 28.7 bits (61), Expect = 5.0
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = -1
Query: 720 SDTE-EDESPVSKNTNESKKSNAPANLPKKRKLDDYEKEISISHKAFKPFRDASIQKWNE 544
+DTE EDE P+ + K +LP + +LD ++S A + I+ NE
Sbjct: 2 ADTEGEDEKPLKLPQEQDVKEEKQEDLPPRGRLDRQRSYSTVSLAARSKLA-SLIELANE 60
Query: 543 KTRLATASNIKNAPTNTVLQQISYILSDRDKLIRRTQLKRTEYDIVGYSKAVNNDNDSEK 364
T A N K V Q+ L + + R + + D+V + + + NDS K
Sbjct: 61 ATEGGHADNKK------VADQVFDSLVGGNFDLERRFIVQDPADLVIVLELLEHSNDSLK 114
Query: 363 V 361
V
Sbjct: 115 V 115
>SB_39173| Best HMM Match : DUF689 (HMM E-Value=3.1)
Length = 371
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -1
Query: 468 LSDRDKLIRRTQLKRTEYDIVGYSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDNDFYHQL 289
+S + + +LK E K + ++D E VT+ R+D + + EI D +
Sbjct: 30 ISTEEMTKEQVELKEQELSHEDVVKNLKRNHD-EHVTRLRQDFERQVKEIEAKYDKKMKA 88
Query: 288 LRELIEC-KSADISDPVQLSRQ 226
LRE +E + +I + ++SRQ
Sbjct: 89 LREELELRRKTEIHEIEEVSRQ 110
>SB_39059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = -1
Query: 408 VGYSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDNDFYHQLLRELIECKSADISD 247
+ Y N D+D + + DDD+ + DD+DF H + + C + +
Sbjct: 5 ISYKSNDNYDDDDDDDDDDDDDDDDDKNDDDDDDDFSHVIYDVMSSCPCLTVEE 58
>SB_25259| Best HMM Match : PhdYeFM (HMM E-Value=6.6)
Length = 393
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 444 RRTQLKRTEYDIVGYS-KAVNNDNDSEKVTKNRKDDDEYIPEIFDDNDFYHQLLR 283
+R Q+ T+Y S VN +N+ +VTK +D + I DD YH++ +
Sbjct: 293 QRAQMTATDYKAPLQSIMDVNRNNEIHRVTKATSNDKQPAQSIMDDGR-YHRVTK 346
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 396 KAVNNDNDSEKVTKNRKDDDEYIPEIFDDNDFYHQ 292
K N+DND + K++ +D++ DD D HQ
Sbjct: 124 KNTNDDNDKKNDDKDKNTNDDFDDNTTDDIDKKHQ 158
>SB_10387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 597
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 471 ILSDRDKLIRRTQLKRTEYDIVG--YSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDND 304
IL R + + KR+ +++ +SK+ NN+ND + + DDD+ + DD+D
Sbjct: 90 ILIKRPQTALESGRKRSASEMIPSHHSKSFNNNNDDDDDDDDDDDDDDDDDDDDDDDD 147
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -1
Query: 441 RTQLKRTEYDIVGYSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDND 304
R ++RT Y VG +NND+D + + DDD I + +DN+
Sbjct: 371 RQYIRRTLY--VGNMFDMNNDDDRDDDVEGYGDDDSDIDDDVNDNN 414
>SB_40237| Best HMM Match : TPR_2 (HMM E-Value=0.00034)
Length = 466
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 414 DIVGYSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDNDFYH 295
D++ Y ++D+D + + DDD+ +D +D+YH
Sbjct: 426 DLLYYQWIYDDDDDDDDDDDDDDDDDDARGAAYDASDYYH 465
>SB_25164| Best HMM Match : FMN_dh (HMM E-Value=3.1e-13)
Length = 270
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 387 NNDNDSEKVTKNRKDDDEYIPEIFD--DND 304
+NDNDS+ KN D D+Y + D DND
Sbjct: 198 DNDNDSDDDDKNEDDVDDYTKDESDNVDND 227
>SB_16983| Best HMM Match : SNARE (HMM E-Value=1.9)
Length = 101
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -1
Query: 636 KRKLDDYEKEISISHKAFKPFRDASIQKWNEKTRLATASNIKNAPTNTVLQQISYILSD 460
+ KLD E ++ + HK + + QK T A N N +V+QQ+ + D
Sbjct: 40 ENKLDQAESDLEVKHKRVE---ELERQKSETTTEFLQAYNFANTAKESVVQQLQRLHRD 95
>SB_12900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 28.3 bits (60), Expect = 6.7
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Frame = -1
Query: 684 NTNESKKSNAPANLPKKRKLDDYEKEISISHKAFKPFRDASIQKWNEKTRLATASNIKNA 505
N E+K S++ K+K + + I KA +S+ W + I N
Sbjct: 168 NGKENKDSHSDGIEALKQKFFETRRIIGYEVKAAGN-NASSLSGWESSSSSEATPEITNQ 226
Query: 504 PTNTVLQQISYILSDRDKLI--RRTQLKRTEYDIVGYSKAVNNDNDSEKVTKNRKDDDEY 331
T S+ LS+ DK RR ++K T + +K SE+ K +DE
Sbjct: 227 RHPTDSDSDSW-LSEMDKPTSPRRCKVKCTISTEMVVNKPRKQSASSERSNSTDKHEDEI 285
Query: 330 IPEIFDDND 304
++ DD+D
Sbjct: 286 PYDVDDDSD 294
>SB_58883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 390 VNNDNDSEKVTKNRKDDDEYIPEIFDDND 304
+ ND+D + N KDDD+ + + ++DND
Sbjct: 8 ITNDHDGDN---NDKDDDDDVDDDYEDND 33
>SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = -1
Query: 405 GYSKAVNNDNDSEKVTKNRKDDDEYIPEIFDDNDFYHQLLRE 280
G ++ + +D+EK+ N++D++ P+I + + L RE
Sbjct: 69 GRARLAKSTSDTEKMASNKEDENSSNPKIAQEPADFRTLFRE 110
>SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -1
Query: 414 DIVGYSKAVNNDNDSEKVTK-NRKDDDEYIPEIFDDND 304
D++ + VNND+DS+ + + + KDDD+ ++ D+ D
Sbjct: 200 DVIDDNDDVNNDDDSDVIDEGDVKDDDD--SDVIDEGD 235
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 27.9 bits (59), Expect = 8.8
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -1
Query: 315 DDNDFYHQLLRELIECKSADISDPVQLSRQWIALQQMRSKMKRKVDTKATKGRKIKYVVH 136
D DFY Q L + C S +QL+ A K KR + A R + +
Sbjct: 1661 DAGDFYGQCLGDPDLCIKG-FSFAMQLNFDDDAKSY---KDKRLILDSAGDSRGVSVYLQ 1716
Query: 135 NQLVNYMAPEKCLTW---TEESTNELYNSLF 52
N VNY TW TE +TNE + +F
Sbjct: 1717 NNTVNYKVVTSTKTWKLSTELATNEWQDLVF 1747
>SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12)
Length = 567
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 402 YSKAVN-NDNDSEKVTKNRKDDDEYIPEIFDDNDF 301
Y K N ND D N D+D+Y +DDND+
Sbjct: 114 YHKDYNDNDYDDYNYDDNDYDNDDYDDYNYDDNDY 148
>SB_7753| Best HMM Match : RVT_1 (HMM E-Value=0.089)
Length = 723
Score = 27.9 bits (59), Expect = 8.8
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 1/137 (0%)
Frame = -1
Query: 711 EEDESPVSKNTNESKKSNAPANLPKKRKLDDYEKEISISHKAFKPFRDASIQKWNEKTRL 532
E+ E V + + NL K +KLD + ++ A K S+ + + L
Sbjct: 489 EDYEKEVYEAGTSTDTDMEKENLQKAKKLDAHRRKTMYRDTAAKRIMRQSVSMQSARESL 548
Query: 531 ATASNIKNAPTNTVLQQISYILSDRDKLIRR-TQLKRTEYDIVGYSKAVNNDNDSEKVTK 355
AT + L + + ++ L++R T V + + SE+ +
Sbjct: 549 ATEVTTLGT-RGSKLCGDNNLSKAKEPLVQRIASYCTTPITGVRSKDTIKKEETSEE--E 605
Query: 354 NRKDDDEYIPEIFDDND 304
N D DE+I ++ DD D
Sbjct: 606 NLSDFDEHIMDLPDDKD 622
>SB_56851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -1
Query: 387 NNDNDSEKVTKNRKDDDEYI--PEIFDDNDFY 298
N+DND + + KD+D+Y ++ DDND Y
Sbjct: 52 NDDNDDDDDDYDDKDNDDYDNDDDVDDDNDDY 83
>SB_47302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 414 DIVGYSKAVNNDNDSEKVTKNRKDDD-EYIPEIFDDND 304
DI G K +N+ND + N KDDD E+ E DD +
Sbjct: 79 DINGDDKVGSNENDDDGEHGNEKDDDGEHGNEKDDDGE 116
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Frame = -1
Query: 687 KNTNESKKSNAPANLPKKRKLDDYEKEISISHKAFKPFRDASIQKWNEKTRLATASNIKN 508
K T+E +N K Y K+ + K F+ R + +++ L+T +KN
Sbjct: 265 KRTDELSHNNKEKKEYPKVSSSSYRKKPDNARKQFENVRGDKEFESDDEVALSTLKTLKN 324
Query: 507 APTNTVLQQIS---YILSDRDKLIRRTQLKRTEYDIVGYSKAVNNDNDSEKVTKNRKDD 340
++ S I++D + +R + R S +N + D+ V KN +D
Sbjct: 325 PKAVKPIKGQSKKGTIINDNSRRSKRASISRE-------SAELNRNKDTSPVEKNDNED 376
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,820,902
Number of Sequences: 59808
Number of extensions: 434892
Number of successful extensions: 2836
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2608
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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