Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l19r
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    26   1.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   7.2  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   9.6  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 399 SKAVN-NDNDSEKVTKNRKDDDEYIPEIFDDND 304
           +KA N N+N S+++T +   D+  +P   DD+D
Sbjct: 758 TKADNMNNNHSDQLTGDNSADERAVPNDADDDD 790


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 513 KNAPTNTVLQQISYILSDRDKL 448
           K+AP   + Q +    +DRDKL
Sbjct: 492 KDAPMELICQSVGLSTNDRDKL 513


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 319 YFRYVFIIIFPVLSYLFRVIVIVDSFTI 402
           Y+ Y+F    P+ +YL+R I+ +   T+
Sbjct: 22  YYYYLFTQCNPLSTYLYRTILALRLVTL 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,845
Number of Sequences: 2352
Number of extensions: 13752
Number of successful extensions: 48
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)