Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l19f
         (586 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071275-1|AAL48897.1|  488|Drosophila melanogaster RE30678p pro...    38   0.010
AE014134-1150|AAF52427.1|  488|Drosophila melanogaster CG11188-P...    38   0.010
BT024225-1|ABC86287.1|  805|Drosophila melanogaster LP17019p pro...    29   3.5  
AE014296-1770|AAF50192.1|  161|Drosophila melanogaster CG14166-P...    29   3.5  

>AY071275-1|AAL48897.1|  488|Drosophila melanogaster RE30678p
           protein.
          Length = 488

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = +1

Query: 274 FRKRNVNLLSEVSKKYEGQVITRKDL 351
           FRKRNV LLSE S +Y+G++ +RK+L
Sbjct: 60  FRKRNVKLLSEQSDRYKGKISSRKEL 85


>AE014134-1150|AAF52427.1|  488|Drosophila melanogaster CG11188-PA
           protein.
          Length = 488

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = +1

Query: 274 FRKRNVNLLSEVSKKYEGQVITRKDL 351
           FRKRNV LLSE S +Y+G++ +RK+L
Sbjct: 60  FRKRNVKLLSEQSDRYKGKISSRKEL 85


>BT024225-1|ABC86287.1|  805|Drosophila melanogaster LP17019p
           protein.
          Length = 805

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 263 AASSSLSEDPKSARETVCGFVPN 195
           AASSS ++DP+  +ET+ G  PN
Sbjct: 69  AASSSANDDPEDGQETIYGSKPN 91


>AE014296-1770|AAF50192.1|  161|Drosophila melanogaster CG14166-PA
           protein.
          Length = 161

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 263 AASSSLSEDPKSARETVCGFVPN 195
           AASSS ++DP+  +ET+ G  PN
Sbjct: 69  AASSSANDDPEDGQETIYGSKPN 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,273,980
Number of Sequences: 53049
Number of extensions: 228603
Number of successful extensions: 698
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)