Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10l18r
(743 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 225 3e-59
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 225 3e-59
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 225 4e-59
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 223 1e-58
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 221 6e-58
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 217 6e-57
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 129 1e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 121 7e-28
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 29 2.9
02_02_0106 + 6814391-6817007,6817086-6817462 29 3.9
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 6.8
04_04_1588 - 34633057-34633824 28 6.8
06_03_1237 + 28602250-28604196 28 9.0
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 225 bits (550), Expect = 3e-59
Identities = 106/154 (68%), Positives = 125/154 (81%)
Frame = -3
Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
K+ EL +IC +L LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E+
Sbjct: 95 KIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAEN 154
Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
+ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD
Sbjct: 155 TMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD 214
Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 277
TL+E+SYKDSTLIMQLLRDNLTLWTSD D E
Sbjct: 215 TLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAE 248
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 225 bits (550), Expect = 3e-59
Identities = 105/147 (71%), Positives = 123/147 (83%)
Frame = -3
Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
K+ EL +IC +L LLD HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E+
Sbjct: 313 KIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAEN 372
Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
+ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD
Sbjct: 373 TMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD 432
Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSD 298
TL+E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 433 TLSEESYKDSTLIMQLLRDNLTLWTSD 459
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 225 bits (549), Expect = 4e-59
Identities = 109/158 (68%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Frame = -3
Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
K+ EL +IC +L LLD HL+P ++ ESKVFYLKMKGDY+RYLAE TG R E
Sbjct: 89 KIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAES 148
Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
+ AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELD
Sbjct: 149 TMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELD 208
Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSD-TQGDGDEPAE 268
TL E+SYKDSTLIMQLLRDNLTLWTSD T+ GDE E
Sbjct: 209 TLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVKE 246
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 223 bits (545), Expect = 1e-58
Identities = 104/154 (67%), Positives = 121/154 (78%)
Frame = -3
Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
K+ EL IC +L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E
Sbjct: 72 KIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAES 131
Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
+ AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD
Sbjct: 132 TMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD 191
Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 277
+L E+SYKDSTLIMQLLRDNLTLWTSD DG +
Sbjct: 192 SLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGD 225
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 221 bits (539), Expect = 6e-58
Identities = 105/154 (68%), Positives = 122/154 (79%)
Frame = -3
Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
++ EL +IC +L LLD HL+P A+ ESKVFYLKMKGDY+RYLAE +G R E+
Sbjct: 94 RIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAEN 153
Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
+ AY+ A +I+ A + THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELD
Sbjct: 154 TLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELD 213
Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 277
TL E+SYKDSTLIMQLLRDNLTLWTSD DG +
Sbjct: 214 TLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGD 247
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 217 bits (531), Expect = 6e-57
Identities = 103/154 (66%), Positives = 122/154 (79%)
Frame = -3
Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
+V EL IC +L LLD+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R +
Sbjct: 99 RVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADA 158
Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
+ AYQ A +I+ ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD
Sbjct: 159 TLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELD 218
Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 277
TL E+SYKDSTLIMQLLRDNLTLWTSD Q DG +
Sbjct: 219 TLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGD 252
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 129 bits (312), Expect(2) = 1e-35
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = -3
Query: 537 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 358
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205
Query: 357 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 259
KDSTLIMQLLRDNL LW SD D D+ E D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238
Score = 38.7 bits (86), Expect(2) = 1e-35
Identities = 26/66 (39%), Positives = 33/66 (50%)
Frame = -3
Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
KV E+ +IC DV+ ++DK KGDYYRYLAE TG + V E
Sbjct: 66 KVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKIEVSEL 107
Query: 558 SQKAYQ 541
S AY+
Sbjct: 108 SLNAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 121 bits (291), Expect = 7e-28
Identities = 66/150 (44%), Positives = 96/150 (64%)
Frame = -3
Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
KV ELR +C +VL ++ H +P A++ E+ VF+ KMKGDYYRYLAE +TG + + +
Sbjct: 86 KVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQ 145
Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
S AYQ A+ ++ FS+ EI+NSP++A Q+AKQA D+A AE++
Sbjct: 146 SLMAYQ-AWPCAQL---------------FSLL--EIMNSPERASQVAKQALDEATAEIN 187
Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQG 289
+ + YKDS L+MQLL++NL LWTS+ G
Sbjct: 188 SAGVEGYKDSMLMMQLLKENLALWTSELTG 217
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -3
Query: 468 SVFYYEILNSPDKACQLAKQAFDDAIAEL-DTLNEDSYKDSTLIMQLLRD-NLTLWTSDT 295
S Y + PD + K++FD+ + E + +Y S + ++ D LWT +
Sbjct: 676 SFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGEL 735
Query: 294 QGDGDEPAEGGDN*YLAA 241
D ++ +GG+N Y+ A
Sbjct: 736 I-DMEKVTQGGENLYIRA 752
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 208 CL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRLKL-NVVSSLTVL 50
CL +N H S +SSP PT C N+K F KL N ++SL L
Sbjct: 93 CLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSLPAL 146
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = -3
Query: 726 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 622
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>04_04_1588 - 34633057-34633824
Length = 255
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 220 KCVCWGECGEILVVAALGRLVAIALSV*RPK 312
+CVCW +++ ALG I +V +PK
Sbjct: 68 RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98
>06_03_1237 + 28602250-28604196
Length = 648
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = -3
Query: 696 GLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKA 517
GL+D + + SKVFY + + Y Y + +A G H ++ +++ +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370
Query: 516 KMQPTHPIRLGL 481
++P H +G+
Sbjct: 371 NVEPNHVTFIGV 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,747,643
Number of Sequences: 37544
Number of extensions: 379710
Number of successful extensions: 1088
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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