SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l18r
         (743 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803...   225   3e-59
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...   225   3e-59
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065...   225   4e-59
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760...   223   1e-58
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629...   221   6e-58
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448...   217   6e-57
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593...   129   1e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007...   121   7e-28
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462...    29   2.9  
02_02_0106 + 6814391-6817007,6817086-6817462                           29   3.9  
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034     28   6.8  
04_04_1588 - 34633057-34633824                                         28   6.8  
06_03_1237 + 28602250-28604196                                         28   9.0  

>04_04_0141 +
           23079516-23079925,23080006-23080084,23080204-23080326,
           23081655-23081771,23081886-23081945
          Length = 262

 Score =  225 bits (550), Expect = 3e-59
 Identities = 106/154 (68%), Positives = 125/154 (81%)
 Frame = -3

Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
           K+  EL +IC  +L LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE  TG  R    E+
Sbjct: 95  KIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAEN 154

Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
           +  AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD
Sbjct: 155 TMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD 214

Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 277
           TL+E+SYKDSTLIMQLLRDNLTLWTSD   D  E
Sbjct: 215 TLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAE 248


>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score =  225 bits (550), Expect = 3e-59
 Identities = 105/147 (71%), Positives = 123/147 (83%)
 Frame = -3

Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
           K+  EL +IC  +L LLD HL+P ++ PESKVFYLKMKGDYYRYLAE  TG  R    E+
Sbjct: 313 KIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAEN 372

Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
           +  AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD
Sbjct: 373 TMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD 432

Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSD 298
           TL+E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 433 TLSEESYKDSTLIMQLLRDNLTLWTSD 459


>08_02_0753 -
           20805672-20805731,20805825-20805941,20806394-20806516,
           20806700-20806778,20806867-20807258
          Length = 256

 Score =  225 bits (549), Expect = 4e-59
 Identities = 109/158 (68%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
 Frame = -3

Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
           K+  EL +IC  +L LLD HL+P ++  ESKVFYLKMKGDY+RYLAE  TG  R    E 
Sbjct: 89  KIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAES 148

Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
           +  AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELD
Sbjct: 149 TMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELD 208

Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSD-TQGDGDEPAE 268
           TL E+SYKDSTLIMQLLRDNLTLWTSD T+  GDE  E
Sbjct: 209 TLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVKE 246


>11_06_0036 +
           19474848-19475188,19475696-19475774,19475880-19476002,
           19476970-19477086,19477169-19477228
          Length = 239

 Score =  223 bits (545), Expect = 1e-58
 Identities = 104/154 (67%), Positives = 121/154 (78%)
 Frame = -3

Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
           K+  EL  IC  +L LLD HL+P A   ESKVFYLKMKGDY+RYLAE  +G+ R    E 
Sbjct: 72  KIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAES 131

Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
           +  AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD
Sbjct: 132 TMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD 191

Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 277
           +L E+SYKDSTLIMQLLRDNLTLWTSD   DG +
Sbjct: 192 SLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGD 225


>03_05_0881 +
           28461857-28462263,28462357-28462435,28462798-28462920,
           28463632-28463748,28463861-28463917
          Length = 260

 Score =  221 bits (539), Expect = 6e-58
 Identities = 105/154 (68%), Positives = 122/154 (79%)
 Frame = -3

Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
           ++  EL +IC  +L LLD HL+P A+  ESKVFYLKMKGDY+RYLAE  +G  R    E+
Sbjct: 94  RIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAEN 153

Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
           +  AY+ A +I+ A +  THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELD
Sbjct: 154 TLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELD 213

Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 277
           TL E+SYKDSTLIMQLLRDNLTLWTSD   DG +
Sbjct: 214 TLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGD 247


>08_02_1026 +
           23743186-23743686,23743793-23743915,23744734-23744850,
           23744948-23745001
          Length = 264

 Score =  217 bits (531), Expect = 6e-57
 Identities = 103/154 (66%), Positives = 122/154 (79%)
 Frame = -3

Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
           +V  EL  IC  +L LLD+ L+P A+  ++KVFYLKMKGDY+RYLAE  TG  R    + 
Sbjct: 99  RVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADA 158

Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
           +  AYQ A +I+  ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD
Sbjct: 159 TLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELD 218

Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 277
           TL E+SYKDSTLIMQLLRDNLTLWTSD Q DG +
Sbjct: 219 TLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGD 252


>01_01_0767 +
           5931031-5931281,5931414-5931594,5932020-5932129,
           5932212-5932360,5932686-5932738,5933168-5933260
          Length = 278

 Score =  129 bits (312), Expect(2) = 1e-35
 Identities = 61/93 (65%), Positives = 73/93 (78%)
 Frame = -3

Query: 537 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 358
           A + ++  + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205

Query: 357 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 259
           KDSTLIMQLLRDNL LW SD   D D+  E  D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238



 Score = 38.7 bits (86), Expect(2) = 1e-35
 Identities = 26/66 (39%), Positives = 33/66 (50%)
 Frame = -3

Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
           KV  E+ +IC DV+ ++DK                  KGDYYRYLAE  TG  +  V E 
Sbjct: 66  KVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKIEVSEL 107

Query: 558 SQKAYQ 541
           S  AY+
Sbjct: 108 SLNAYE 113


>11_06_0360 -
           22699524-22699529,22699865-22699899,22700650-22700792,
           22701165-22701220,22701367-22701454,22702737-22703037,
           22704365-22704428
          Length = 230

 Score =  121 bits (291), Expect = 7e-28
 Identities = 66/150 (44%), Positives = 96/150 (64%)
 Frame = -3

Query: 738 KVXKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVED 559
           KV  ELR +C +VL ++  H +P A++ E+ VF+ KMKGDYYRYLAE +TG  + +  + 
Sbjct: 86  KVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQ 145

Query: 558 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELD 379
           S  AYQ A+  ++                FS+   EI+NSP++A Q+AKQA D+A AE++
Sbjct: 146 SLMAYQ-AWPCAQL---------------FSLL--EIMNSPERASQVAKQALDEATAEIN 187

Query: 378 TLNEDSYKDSTLIMQLLRDNLTLWTSDTQG 289
           +   + YKDS L+MQLL++NL LWTS+  G
Sbjct: 188 SAGVEGYKDSMLMMQLLKENLALWTSELTG 217


>08_01_0533 +
           4625376-4625709,4625799-4625966,4627428-4627689,
           4627787-4627934,4628453-4628496,4628812-4628859,
           4629245-4630509,4630741-4630839,4630916-4631097,
           4631186-4631246,4631488-4631725,4631818-4631971,
           4632042-4632335
          Length = 1098

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -3

Query: 468 SVFYYEILNSPDKACQLAKQAFDDAIAEL-DTLNEDSYKDSTLIMQLLRD-NLTLWTSDT 295
           S   Y  +  PD    + K++FD+ + E     +  +Y  S +   ++ D    LWT + 
Sbjct: 676 SFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGEL 735

Query: 294 QGDGDEPAEGGDN*YLAA 241
             D ++  +GG+N Y+ A
Sbjct: 736 I-DMEKVTQGGENLYIRA 752


>02_02_0106 + 6814391-6817007,6817086-6817462
          Length = 997

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 208 CL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRLKL-NVVSSLTVL 50
           CL +N  H   S   +SSP PT    C N+K        F  KL N ++SL  L
Sbjct: 93  CLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSLPAL 146


>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
          Length = 930

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = -3

Query: 726 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 622
           +LRE+ YD+   LD+ L+  A+ P S     K+   K+KG
Sbjct: 71  DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110


>04_04_1588 - 34633057-34633824
          Length = 255

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 220 KCVCWGECGEILVVAALGRLVAIALSV*RPK 312
           +CVCW     +++  ALG    I  +V +PK
Sbjct: 68  RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98


>06_03_1237 + 28602250-28604196
          Length = 648

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 17/72 (23%), Positives = 36/72 (50%)
 Frame = -3

Query: 696 GLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKA 517
           GL+D +      +  SKVFY   + + Y Y + +A G   H    ++   +++   +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370

Query: 516 KMQPTHPIRLGL 481
            ++P H   +G+
Sbjct: 371 NVEPNHVTFIGV 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,747,643
Number of Sequences: 37544
Number of extensions: 379710
Number of successful extensions: 1088
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -