BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l18f (581 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 181 8e-47 SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 180 2e-46 SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 32 0.053 SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 31 0.093 SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 29 0.37 SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 28 0.87 SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 27 2.6 SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 27 2.6 SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 27 2.6 SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 27 2.6 SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 26 4.6 SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 26 4.6 SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 25 6.1 SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 25 6.1 SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 25 6.1 SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 25 8.1 >SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces pombe|chr 1|||Manual Length = 270 Score = 181 bits (440), Expect = 8e-47 Identities = 90/144 (62%), Positives = 110/144 (76%), Gaps = 3/144 (2%) Frame = +3 Query: 147 SVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSW 326 + +E+ V AKLAEQAERY+ M MK V T EL+ EERNLLSVAYKNV+GARR+SW Sbjct: 3 TTSREDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASW 62 Query: 327 RVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVF 500 R++SSIEQK E G+ + ++ KEYR K+E+EL IC D+L +L+KHLIP A++ ESKVF Sbjct: 63 RIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVF 122 Query: 501 YLKMKGDYYRYLAEVATGETR-HS 569 Y KMKGDYYRYLAE A GE R HS Sbjct: 123 YYKMKGDYYRYLAEFAVGEKRQHS 146 >SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces pombe|chr 1|||Manual Length = 270 Score = 180 bits (437), Expect = 2e-46 Identities = 89/140 (63%), Positives = 108/140 (77%), Gaps = 2/140 (1%) Frame = +3 Query: 144 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 323 MS +E V AKLAEQAERY++M MK+V + +LS EERNLLSVAYKN++GARR+S Sbjct: 1 MSNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRAS 60 Query: 324 WRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 497 WR+ISSIEQK E G+ R+ + KEYR K+E EL +IC+DVL +L+KHLIP A+ ESKV Sbjct: 61 WRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKV 120 Query: 498 FYLKMKGDYYRYLAEVATGE 557 FY KMKGDYYRYLAE GE Sbjct: 121 FYYKMKGDYYRYLAEFTVGE 140 >SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces pombe|chr 2|||Manual Length = 3131 Score = 32.3 bits (70), Expect = 0.053 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Frame = +3 Query: 126 PLPSSTMSVDKE--ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKN 299 P+ S TMS E + R + + Y+ MA + E E ++ + LLS Y N Sbjct: 2997 PIMSITMSDSSAYGEELMRERFEHLLKAYEKMALMVAEQEEFNAKIEDMALKLLSEKYDN 3056 Query: 300 VVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREIC 431 +R+ + +E+ + EY +E+ L++ C Sbjct: 3057 EAYQAELFYRLSNCVEKVLHNKISITDLKTEYEEILEQTLKKEC 3100 >SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces pombe|chr 2|||Manual Length = 542 Score = 31.5 bits (68), Expect = 0.093 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +3 Query: 147 SVDKEELVQRAKLAEQAERYDDMAAAMKEVT--ETGVELSNEERN-LLSVAYKNVVGARR 317 SV + ++ K ++ E + ++ + +K V+ ET E+SN+E N LL + YK V Sbjct: 3 SVSNVSVNEQGKFNDKEEGFSNLKS-LKHVSHSETDFEVSNDEDNQLLELGYKPVFKREF 61 Query: 318 SSWRVIS 338 S+W S Sbjct: 62 STWATFS 68 >SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator Prp45|Schizosaccharomyces pombe|chr 3|||Manual Length = 557 Score = 29.5 bits (63), Expect = 0.37 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%) Frame = +3 Query: 153 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 332 +K+E QR + Q R D M + +G S+ + SV+ + +R S+ Sbjct: 320 EKQEKEQRLFMLAQKAREDRMG---RNAASSGP--SHAKPRSTSVSSEERSRSRAGSFSH 374 Query: 333 ISSIEQKTEGSE---RKQQMAKEYRVKVEKELR 422 S E + E SE R+Q++ +E R + EK+LR Sbjct: 375 HSESENEDEDSEAFRRRQELRRERRRQAEKDLR 407 >SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 285 Score = 28.3 bits (60), Expect = 0.87 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Frame = +1 Query: 37 FSAREKLILC-----LNLLVQIHFSPSDKGISELVLFHRPRCPSTRKNWCNVPNWPNKLS 201 FS +E ILC L+L+V + ++ S+ + F +PR K N WPN+ S Sbjct: 39 FSDKENSILCKQLKELDLVVSSNKEFLNEKTSDQISFLKPRETVVEKKLANGSIWPNETS 98 Query: 202 DM 207 + Sbjct: 99 HL 100 >SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr 2|||Manual Length = 463 Score = 26.6 bits (56), Expect = 2.6 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +3 Query: 294 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVE 410 KN+ S+ R +SS + K +E + M +Y K+E Sbjct: 350 KNLENDEESTLRALSSFQSKIRNAEDEDVMDSQYGSKIE 388 >SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schizosaccharomyces pombe|chr 2|||Manual Length = 695 Score = 26.6 bits (56), Expect = 2.6 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 3/110 (2%) Frame = +3 Query: 153 DKEELVQRAKLAEQA-ERYDDMAAAMK--EVTETGVELSNEERNLLSVAYKNVVGARRSS 323 D ++RA A QA E+ + + +K E+ +L LL V + + R S Sbjct: 265 DVRSRIERA--ARQAREKNEKLLQNVKTSEIPINAADLEGINPELLPVIEEEIRSFRDQS 322 Query: 324 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 473 +K + + KEY K +++LR+ D+ LL KH I + Sbjct: 323 ---AMKKREKQRSKDEYASLYKEYTRKEQEKLRKQNDDLQNLLSKHRISR 369 >SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr 1|||Manual Length = 1778 Score = 26.6 bits (56), Expect = 2.6 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +3 Query: 447 LLDKHLIPKASNPESKVFYLKMKGDYYR---YLAEVATGETRHSVVED 581 +++K IP++ E+K Y + GD+ +L E A E H V+ D Sbjct: 1608 MIEKLCIPESWLNEAKALYARYVGDHLNELYFLQEAALYEDAHKVLLD 1655 >SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces pombe|chr 2|||Manual Length = 355 Score = 26.6 bits (56), Expect = 2.6 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Frame = +3 Query: 345 EQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM-KGD 521 E E+ Q++A+ Y+V + +LRE YD LG + +P A ++ F+ + GD Sbjct: 43 ENPEAAREKFQKLAEAYQVLSDPKLRE-KYDKLGKVG--AVPDAGFEDAFEFFKNLFGGD 99 Query: 522 YYR-YLAEV 545 +R Y+ E+ Sbjct: 100 SFRDYVGEL 108 >SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr 1|||Manual Length = 487 Score = 25.8 bits (54), Expect = 4.6 Identities = 12/45 (26%), Positives = 22/45 (48%) Frame = +3 Query: 282 SVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKE 416 S +Y + G S W+ I ++ K+ G +R ++ Y +KE Sbjct: 61 SFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAYYSERYHSFRDKE 105 >SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pombe|chr 2|||Manual Length = 1067 Score = 25.8 bits (54), Expect = 4.6 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +1 Query: 49 EKLILCLNLLVQIHFSPSDKGISELVLFHRPRCPSTRKNWCNVPNW 186 EKL+ C HF +G+ + L RC +T CNVP W Sbjct: 683 EKLVACTT-----HFY---EGVRKSALSSLWRCATTYYKVCNVPQW 720 >SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 952 Score = 25.4 bits (53), Expect = 6.1 Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 7/111 (6%) Frame = +3 Query: 156 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG-ARRSSWRV 332 KE L +L E + D + A + V NLL + YKNV A + Sbjct: 608 KEHLYSFLQLVEPSFAKSDSSNATESQISESVRKGISIFNLLFIVYKNVCSQAGINPSTK 667 Query: 333 ISSIEQKTEGSE------RKQQMAKEYRVKVEKELREICYDVLGLLDKHLI 467 + +++ T E + Q +EY+ K E ELR + LL+ LI Sbjct: 668 LEDLDEHTLSDELTYITKKFVQKDQEYQTK-EIELRNYKITLQSLLEDKLI 717 >SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 580 Score = 25.4 bits (53), Expect = 6.1 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +1 Query: 91 FSPSDK-GISELVLFHRPRCPSTRKNWCNVPNWPNKLSDMTT 213 FSP +K + +L LFH + PS+++ V N + SD +T Sbjct: 162 FSPPEKPSMKDLALFHGNKSPSSKETIPKVSN--SNSSDTST 201 >SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosaccharomyces pombe|chr 2|||Manual Length = 421 Score = 25.4 bits (53), Expect = 6.1 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +3 Query: 366 ERKQQMAKEYRVKVEKELREICYDV--LGLLDKHLIPKASNPE 488 E++Q A +YR+KVE+ +I V + L+ L + SNPE Sbjct: 85 EQEQNEANDYRLKVERLEHKISDYVQEINSLNSQLQIQKSNPE 127 >SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schizosaccharomyces pombe|chr 1|||Manual Length = 607 Score = 25.0 bits (52), Expect = 8.1 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 5/117 (4%) Frame = +3 Query: 237 TETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKE 416 T +G+ + +E + L V Y ++ + I + S + + ++ E Sbjct: 278 TNSGLYSTKKELSALQVRYATLLRKFTDQTKKIEELSLAASRSSENENTIRRLALE-NHE 336 Query: 417 LREICYDVLGLLD-----KHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSV 572 L+ + +D KHLI ++NP+ F D Y EV T+ SV Sbjct: 337 LKNSNNQLNNHIDDLTREKHLIALSNNPKGDEFLSPSNLDEMVYSKEVGLSFTQPSV 393 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,399,218 Number of Sequences: 5004 Number of extensions: 45966 Number of successful extensions: 169 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 167 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 250133048 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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