BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l18f (581 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-41 SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 4e-41 SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 162 2e-40 SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 147 7e-36 SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16 SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 33 0.13 SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27) 31 0.52 SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2 SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6 SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1 SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1 SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 28 4.8 SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8 SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 4.8 SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4 SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5 SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) 27 8.5 >SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 219 Score = 165 bits (401), Expect = 2e-41 Identities = 81/138 (58%), Positives = 107/138 (77%) Frame = +3 Query: 144 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 323 M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+YKN+VG RRSS Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139 Query: 324 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 503 WRVISSIE+KT S + K+Y+ +EKEL+++C +VLG+L++ LIP A + E+KVFY Sbjct: 140 WRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFY 197 Query: 504 LKMKGDYYRYLAEVATGE 557 K+KGDYYRYLAE + G+ Sbjct: 198 FKLKGDYYRYLAEFSHGQ 215 >SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 309 Score = 164 bits (399), Expect = 4e-41 Identities = 82/122 (67%), Positives = 91/122 (74%) Frame = +3 Query: 213 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 392 MA AMKE TE L EERNLLSVAYKNVVGA+RSSWRVISSIEQK EGSERK+Q + Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTET 60 Query: 393 YRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSV 572 YR +E EL E+C VL LL+ LIP A + ESKVFYLKMKGDYYRY EVA + R V Sbjct: 61 YRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGADRRREV 120 Query: 573 VE 578 V+ Sbjct: 121 VQ 122 >SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) Length = 248 Score = 162 bits (393), Expect = 2e-40 Identities = 83/152 (54%), Positives = 105/152 (69%), Gaps = 3/152 (1%) Frame = +3 Query: 132 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGA 311 P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAYKNVVGA Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62 Query: 312 RRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS---N 482 RRSSWRVISS+EQK E + K+YR + EL C +VL +L+ +L+ N Sbjct: 63 RRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDIN 120 Query: 483 PESKVFYLKMKGDYYRYLAEVATGETRHSVVE 578 E+KVFYLKM+GDY+RYL EVA G++R +E Sbjct: 121 TEAKVFYLKMRGDYHRYLVEVAEGDSRKENIE 152 >SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) Length = 251 Score = 147 bits (356), Expect = 7e-36 Identities = 75/123 (60%), Positives = 93/123 (75%), Gaps = 3/123 (2%) Frame = +3 Query: 153 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 332 DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAYKNV+GARR+SWR+ Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62 Query: 333 ISSIEQKTE--GSE-RKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 503 I+SIEQK E G + K +M + YR +E+EL+ IC ++L LLD LI + + ESKVFY Sbjct: 63 ITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFY 122 Query: 504 LKM 512 K+ Sbjct: 123 NKI 125 >SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 607 Score = 83.0 bits (196), Expect = 2e-16 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 2/102 (1%) Frame = +3 Query: 144 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 323 M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV YKNVVG++R + Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245 Query: 324 WRVISSIEQKTEGSERKQQMAK--EYRVKVEKELREICYDVL 443 WR + ++ R Q+ +Y+ K+E EL+ +C ++L Sbjct: 246 WRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287 >SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) Length = 442 Score = 33.5 bits (73), Expect = 0.13 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = +3 Query: 156 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 335 KE+ AK ++ ER + A K+ E + EE++ L K R+ + Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEIN 398 Query: 336 SSIEQKTEGSERKQQMAKEYRVKVEK 413 + IE+K + E+K+Q +E K E+ Sbjct: 399 AKIEEKKKREEKKKQEEEEKMKKKEQ 424 >SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27) Length = 271 Score = 31.5 bits (68), Expect = 0.52 Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 1/135 (0%) Frame = +3 Query: 9 PRSRQNQYIVQRKRKTDIVLKFAGSNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQR-AKL 185 PR+R + Y+V V+ + + +Q +S M +KE ++ A+ Sbjct: 25 PRARDDSYLVPSDAPKKRVILYLVNGVKLALQQPGNQVSRNGREGMGTEKEAQTEKEAQT 84 Query: 186 AEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGS 365 ++AER + + TE + E + + + R I + +K + Sbjct: 85 EKEAEREKEAETEKEAQTEKEAQTEKEAEREKEAETEKEAEREKEAEREIEAETEKEAET 144 Query: 366 ERKQQMAKEYRVKVE 410 E++ Q KE + + E Sbjct: 145 EKEAQTEKEAQTEKE 159 >SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 994 Score = 30.3 bits (65), Expect = 1.2 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +3 Query: 120 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 272 +SPLPS+ +E+V KLAE+ E ++++ T+ E + EE+ Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693 >SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3367 Score = 29.9 bits (64), Expect = 1.6 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 12/121 (9%) Frame = +3 Query: 141 TMSVDKEELVQRAKLAEQAERY---DDMAAAMKEVTETGVELSNE-ERNLLSVAYKNVVG 308 ++S+ +EL + LA Q + D A K+VT ++ + E R + + Sbjct: 3123 SLSLKSQELEAKNALANQKLKQMVKDQQEAEKKKVTSMEIQTTIETHRKQTIIEMVSCAA 3182 Query: 309 ARRSSWR--------VISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHL 464 R S++ + SS++++T+ + KQQ + +VE + E V G+ +HL Sbjct: 3183 CLRKSYQESAFLDLLITSSLQKQTKQIKEKQQAVMKDLAQVEPAVDEARQAVKGIKKQHL 3242 Query: 465 I 467 + Sbjct: 3243 V 3243 >SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2202 Score = 29.5 bits (63), Expect = 2.1 Identities = 22/100 (22%), Positives = 52/100 (52%), Gaps = 3/100 (3%) Frame = +3 Query: 132 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLL-SVAYKNVVG 308 PSS S DK+E+ +++ +++++ ++A K + E ++S + S+ K + Sbjct: 1066 PSSRSSHDKDEISEKSNPSDKSD--VEVARKNKHMPEALYKISETISGMNDSITLKEPLK 1123 Query: 309 ARRSSWR--VISSIEQKTEGSERKQQMAKEYRVKVEKELR 422 A+ R ++ + E +R+ + K++R++ EK+ R Sbjct: 1124 AKDGDGRNKEEQELKDRMENEKREDTIRKQHRLQWEKKAR 1163 >SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1234 Score = 29.5 bits (63), Expect = 2.1 Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 6/115 (5%) Frame = +3 Query: 156 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR------R 317 ++ L + K A +R +A+A+ + + + LS K VV + + Sbjct: 279 QKTLSEMFKQAVTEDRPKMLASAITKALNQDIHSPSALNLPLSTPAKQVVKTKWDRIREK 338 Query: 318 SSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 482 W ++S E+ +ER++Q E +VK E++ R+ ++ + HL K SN Sbjct: 339 HQWNLLSEDEKNKIKAERRKQKRLELKVKREEKERKRLEELKRVSFAHLGMKLSN 393 >SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) Length = 512 Score = 28.3 bits (60), Expect = 4.8 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%) Frame = +3 Query: 174 RAKLAEQAERYDDMAAAM-KEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQ 350 + K+ +++E+YD + + KE T+ G + E + N AR + ++ + Sbjct: 13 KRKIFKKSEKYDRLEEPLEKEGTDGGEIEAEAEVEPHTEEEANYNEARSENCEKNNNNDS 72 Query: 351 KTEGSERKQQMAKEYRVKVEKELRE 425 T ++ +Q KE+ V +EK+L++ Sbjct: 73 STPDAKSQQADIKEWIVSLEKQLKD 97 >SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1126 Score = 28.3 bits (60), Expect = 4.8 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +3 Query: 327 RVISSIEQKTEGSERKQQMAKEYRVKVEKELREIC 431 R++ IE+K E E ++ AKE + + E+E + IC Sbjct: 919 RIMKEIEEK-EKKEEAERKAKEEKEREERERKRIC 952 >SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) Length = 783 Score = 28.3 bits (60), Expect = 4.8 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +3 Query: 372 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 473 K++M ++Y K+EKE+ Y+++ L K ++ K Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325 >SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 676 Score = 27.9 bits (59), Expect = 6.4 Identities = 26/99 (26%), Positives = 47/99 (47%) Frame = +3 Query: 129 LPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 308 L S+ +D+E R +++++ RY + A MK V E + ++E + + Sbjct: 539 LDSNLSKLDQEVRGLREEISQEESRYHYLHAMMK-VLEIQQKRIDDEMKAYTAQDQ---A 594 Query: 309 ARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELRE 425 R+ SWR EQ T + ++ + K R K +K +RE Sbjct: 595 DRKKSWR-----EQYTRKIQEQENLGKSLREK-QKAVRE 627 >SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 50 Score = 27.5 bits (58), Expect = 8.5 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +3 Query: 432 YDVLGLLDKHLIPKASNPESKVFYLKMKGDYY 527 YD ++ HL+P A +++ +K+ DYY Sbjct: 6 YDSNTVVSHHLLPSAQTRYIRIYPVKVNSDYY 37 >SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) Length = 708 Score = 27.5 bits (58), Expect = 8.5 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 201 RYDDMAAAMKEVTETGVELSNEERNLLSV 287 +YD++ AA+K+ T TG+ S + L V Sbjct: 57 KYDNLLAAVKDATNTGIRESGIDARLCDV 85 Score = 27.5 bits (58), Expect = 8.5 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 201 RYDDMAAAMKEVTETGVELSNEERNLLSV 287 +YD++ AA+K+ T TG+ S + L V Sbjct: 163 KYDNLLAAVKDATNTGIRESGIDARLCDV 191 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,201,843 Number of Sequences: 59808 Number of extensions: 350906 Number of successful extensions: 1057 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1053 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1397989795 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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