Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l17r
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 544 YLYFCVPILFNAKL*FVMWS 485
           Y ++CV I FN  L F++ S
Sbjct: 57  YYFYCVSITFNVHLLFLLCS 76


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 254 MSIFLKLVNRLNSFLSQY*SAFKLFHRRDVQ 162
           +S+ +   +R+N +L  Y  +  + HR+D Q
Sbjct: 108 LSVAVYARDRVNPYLFSYALSVAILHRQDTQ 138


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 197 SAFKLFHRRDVQLV 156
           SAFK  HR DV+ V
Sbjct: 284 SAFKFMHREDVRWV 297


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 595 IVSITCTN*ILAGSIFAYLYFCVPILFNAKL*FVMWSS 482
           I S+ C+  +  G    Y+    P LFN  + + +W +
Sbjct: 484 IDSVACSKTVSDGIRHYYVNVTFPHLFNGLVDYSLWKA 521


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,292
Number of Sequences: 336
Number of extensions: 2914
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)