BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l17r (766 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 2.4 DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 23 2.4 AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 5.4 AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 5.4 AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 5.4 AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 5.4 DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 21 9.5 AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 9.5 >DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse transcriptase protein. Length = 127 Score = 23.4 bits (48), Expect = 2.4 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Frame = +3 Query: 459 VLKIAKGFELHITNYNLALNSIGTQKYRYANIEPAKIQLVHVIDTINIKVL---KALGVY 629 + KI K IT Y + + I QK I Q++H++ T KV L Y Sbjct: 62 IFKIIKSTNEKITRYIIRMFLISQQKTSKLKIYKWNNQILHILWTSYKKVFMKDNILRQY 121 Query: 630 WILF 641 +I F Sbjct: 122 FITF 125 >DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse transcriptase protein. Length = 110 Score = 23.4 bits (48), Expect = 2.4 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Frame = +3 Query: 459 VLKIAKGFELHITNYNLALNSIGTQKYRYANIEPAKIQLVHVIDTINIKVL---KALGVY 629 + KI K IT Y + + I QK I Q++H++ T KV L Y Sbjct: 45 IFKIIKSTNEKITRYIIRMFLISQQKTSKLKIYKWNNQILHILWTSYKKVFMKDNILRQY 104 Query: 630 WILF 641 +I F Sbjct: 105 FITF 108 >AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 22.2 bits (45), Expect = 5.4 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = -1 Query: 499 FVMWSSKPLAIFKTKLLDVSNIPK 428 F WS++P +FK + D+ ++ K Sbjct: 671 FGSWSNRPNLLFKDEAKDLVSVNK 694 >AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 22.2 bits (45), Expect = 5.4 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = -1 Query: 499 FVMWSSKPLAIFKTKLLDVSNIPK 428 F WS++P +FK + D+ ++ K Sbjct: 671 FGSWSNRPNLLFKDEAKDLVSVNK 694 >AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 22.2 bits (45), Expect = 5.4 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = -1 Query: 499 FVMWSSKPLAIFKTKLLDVSNIPK 428 F WS++P +FK + D+ ++ K Sbjct: 671 FGSWSNRPNLLFKDEAKDLVSVNK 694 >AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic acetylcholine receptoralpha-3 protein. Length = 537 Score = 22.2 bits (45), Expect = 5.4 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +2 Query: 260 NSIHIHYSVVHLSLSEGQEGSFRL 331 N++HI YSV L + E + RL Sbjct: 14 NTLHIIYSVAGLKIFEANPDTKRL 37 >DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. Length = 152 Score = 21.4 bits (43), Expect = 9.5 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -2 Query: 705 STFDYY*TITGRDESLQNMLKKII 634 S FD Y T D L++ ++KII Sbjct: 75 SKFDVYLNDTDMDMDLKDSIRKII 98 >AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform B protein. Length = 463 Score = 21.4 bits (43), Expect = 9.5 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = -3 Query: 80 RINGKRRNVVL 48 R+ GKRRN++L Sbjct: 65 RVGGKRRNILL 75 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 173,730 Number of Sequences: 438 Number of extensions: 3318 Number of successful extensions: 8 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 23911269 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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