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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l17f
         (658 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p...    28   1.4  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    28   1.4  
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M...    27   2.4  
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce...    27   2.4  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    27   3.1  
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc...    26   4.2  
SPBC36B7.04 |||tRNA dihydrouridine synthase Dus1 |Schizosaccharo...    26   5.5  
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ...    26   5.5  
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple...    25   7.3  
SPBC354.09c |||Tre1 family protein |Schizosaccharomyces pombe|ch...    25   9.6  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    25   9.6  
SPAC869.07c |mel1||alpha-galactosidase |Schizosaccharomyces pomb...    25   9.6  

>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 723

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 17/61 (27%), Positives = 24/61 (39%)
 Frame = +1

Query: 244 QRRHTTRVPEDRPSSIPFVDVLRARLSSEHSRRDVHTVLGRWLHDLRPLHTVFRPVHAVQ 423
           Q +      E + S  P      A L  E      HT+L    H+L  L  V + +HAV 
Sbjct: 401 QNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKVLKDIHAVY 460

Query: 424 F 426
           +
Sbjct: 461 Y 461


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -3

Query: 176  PPTPRGVPLPAAPTPRPSVLAP 111
            PP P  VP  A P P+PSV AP
Sbjct: 1131 PPVP--VPSGAPPVPKPSVAAP 1150



 Score = 26.2 bits (55), Expect = 4.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 182  GDPPTPRGVPLPAAPTPRPSVLAP 111
            G PP P    +P  P P+PSV AP
Sbjct: 1081 GAPPVPAPSGIP--PVPKPSVAAP 1102



 Score = 26.2 bits (55), Expect = 4.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 176  PPTPRGVPLPAAPTPRPSVLAP 111
            PP P   P  A P P+PSV AP
Sbjct: 1112 PPVP--APSGAPPVPKPSVAAP 1131



 Score = 26.2 bits (55), Expect = 4.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 176  PPTPRGVPLPAAPTPRPSVLAP 111
            PP P   P  A P P+PSV AP
Sbjct: 1150 PPVP--APSGAPPVPKPSVAAP 1169


>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 663

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 242 YPGRSTAVWDRSPGGAASYCGDPPTPRGVP 153
           Y G  T   D +  G     G PP PRGVP
Sbjct: 470 YEGERTLTKDNNLLGKFDLRGIPPAPRGVP 499


>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 1347

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 392  WRGRRS*SHLPRTVWTSLRLCSELRRARRTSTNGIDDGR 276
            WR R + SH   T   SLR   E  +A  ++T  + D R
Sbjct: 1080 WRNRENLSHNNNTTRASLRELLEQEKADASTTTVLSDSR 1118


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 176 PPTPRG-VPLPAAPTPRPSVLAPLAASA 96
           PPTP+  +  P +  PRPS+  P  ASA
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASA 157


>SPAC29B12.07 |sec16||multidomain vesicle coat component
            Sec16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1995

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -3

Query: 206  PGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASAV 93
            P GA +  G+P  P  VPL    T  P    P A  +V
Sbjct: 1910 PAGATAISGNPGMPAPVPLTGKETAVPLSSMPNAPPSV 1947


>SPBC36B7.04 |||tRNA dihydrouridine synthase Dus1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 399

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -2

Query: 522 IMIWNRNMKKKTMKLNEESLRNALYIGR-YQHTKLNGVNRTKYSMERPKVVKPPPENSMD 346
           I +  +N+  +T+     ++ +A  I R  ++T ++GV   + S+  P++  PP    M 
Sbjct: 195 IQMLRKNLPSETVLFANGNILHAQDIDRCIKYTGVDGVLSAEGSLYNPRIFLPPSSPLMT 254

Query: 345 IPP 337
           + P
Sbjct: 255 LYP 257


>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 3655

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 203 PGFCPIQPCFYQDINVDIPLE 265
           PG   I PCF + + +D+P++
Sbjct: 230 PGVQAIIPCFLKMVQIDVPID 250


>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
           subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1522

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -3

Query: 227 TAVWDRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASAVRQQ-TFLTIT 66
           TA+ + + G AA Y G PP+    P      P  +V++   A A+ QQ T L+ T
Sbjct: 91  TAIPNPANGYAAVY-GGPPSQLPPPPQPQSHPNVTVISASPARAIEQQPTILSST 144


>SPBC354.09c |||Tre1 family protein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 794

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -2

Query: 420 NGVNRTKYSMERPKVVKPPPENSMDIPPTMFRAKTSA 310
           N   + + SME  ++++PP E+S   P  + R K +A
Sbjct: 34  NDGEQNETSMEEMEIIEPPSEDSSRFP--LLRTKLAA 68


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 176  PPTPRGVPLPAAPTPRPSVLAPLAASA 96
            PP P   P+PA P   P    PL AS+
Sbjct: 1715 PPPPSAPPMPAGPPSAPP--PPLPASS 1739


>SPAC869.07c |mel1||alpha-galactosidase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 436

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 9/44 (20%), Positives = 21/44 (47%)
 Frame = -2

Query: 516 IWNRNMKKKTMKLNEESLRNALYIGRYQHTKLNGVNRTKYSMER 385
           +WN N+K  + ++      + + + R+Q  K+   N   +S  +
Sbjct: 392 LWNNNVKLVSDRIRANVASHGVQVWRFQQYKVKNTNDKFFSFNK 435


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,421,072
Number of Sequences: 5004
Number of extensions: 49303
Number of successful extensions: 206
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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