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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l17f
         (658 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_22524| Best HMM Match : No HMM Matches (HMM E-Value=.)             108   3e-24
SB_13427| Best HMM Match : No HMM Matches (HMM E-Value=.)              58   5e-09
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.83 
SB_31852| Best HMM Match : TSP_1 (HMM E-Value=4.2e-14)                 30   1.4  
SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_20177| Best HMM Match : hATC (HMM E-Value=1e-04)                    30   1.4  
SB_1097| Best HMM Match : Rho_N (HMM E-Value=0.0007)                   29   2.5  
SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2)                      29   2.5  
SB_58912| Best HMM Match : rve (HMM E-Value=2.2e-17)                   29   3.3  
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)                29   3.3  
SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17)                   29   3.3  
SB_44164| Best HMM Match : rve (HMM E-Value=2.2e-17)                   29   3.3  
SB_31873| Best HMM Match : rve (HMM E-Value=0.00063)                   29   3.3  
SB_28953| Best HMM Match : rve (HMM E-Value=8.9e-07)                   29   3.3  
SB_27406| Best HMM Match : rve (HMM E-Value=4e-17)                     29   3.3  
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)                   29   3.3  
SB_22996| Best HMM Match : Me-amine-dh_L (HMM E-Value=7.2)             29   3.3  
SB_22164| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_20221| Best HMM Match : RVT_1 (HMM E-Value=0.00045)                 29   3.3  
SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5)                   29   3.3  
SB_2133| Best HMM Match : rve (HMM E-Value=2.2e-17)                    29   3.3  
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.3  
SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35)                 29   3.3  
SB_32624| Best HMM Match : rve (HMM E-Value=0.00042)                   29   3.3  
SB_23879| Best HMM Match : rve (HMM E-Value=2.2e-17)                   29   3.3  
SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18)                   29   3.3  
SB_21919| Best HMM Match : rve (HMM E-Value=1.3e-16)                   29   3.3  
SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068)                 29   3.3  
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_41466| Best HMM Match : Collagen (HMM E-Value=9.2)                  29   4.4  
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)                     29   4.4  
SB_15824| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_46327| Best HMM Match : Rho_N (HMM E-Value=4.2e-05)                 28   5.8  
SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)                  28   7.7  
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)                28   7.7  
SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)                     28   7.7  

>SB_22524| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 353

 Score =  108 bits (260), Expect = 3e-24
 Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
 Frame = +2

Query: 170 SAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMX 349
           S  R NN+PPLP +   +PCFY DI VDIP+E+Q++ R L+  W  Y+ V+  N +  + 
Sbjct: 132 SGYRENNFPPLPKWFKCKPCFYHDIQVDIPIEYQKLCRFLFIRWQAYSFVMFYNFIVALA 191

Query: 350 XXXXXXX-----XXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXX 514
                                Y V   P SF+CWYRP YKA ++DSS             
Sbjct: 192 LLSTSATGNHNEGKTFGLSILYLVWNVPASFLCWYRPAYKALKNDSSFSYIIFFLIFFLH 251

Query: 515 XXXTVVQSIGFSDGGSCGLITSISQFK-TNIAVGII 619
               +  ++G   GGSCG IT+   +  TN AV I+
Sbjct: 252 ISINIYYTLGMPGGGSCGFITATDTWHGTNKAVSIM 287


>SB_13427| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 45

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 22/41 (53%), Positives = 30/41 (73%)
 Frame = +2

Query: 179 RHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLW 301
           R NN+PPLP +   +PCFY DI VDIP+E+Q++ R L+  W
Sbjct: 3   RENNFPPLPEWFKFKPCFYHDIQVDIPIEYQKLCRFLFIRW 43


>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1870

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
 Frame = -3

Query: 218  WDRSPGGAASYCGDPPTPRGVPLPAAP---TPRPSVLAPLAASAVRQQ--------TFLT 72
            W+ S    A   G P TP     P  P   TP+PS  APL AS  R Q          LT
Sbjct: 1635 WESSICLRAEIYGCPVTPPTTDPPRPPVTVTPKPSTDAPLPASTSRPQPPVPTKLPVVLT 1694

Query: 71   ITLHYRNNKNTDRRAKCTS 15
            I       + TD+ A C S
Sbjct: 1695 IPPRPIGLRCTDKHASCPS 1713



 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query: 176  PPTPRG---VPLPAAPTPRPS 123
            PPTPR     P P  PTPRPS
Sbjct: 1368 PPTPRPRPPTPRPGPPTPRPS 1388


>SB_31852| Best HMM Match : TSP_1 (HMM E-Value=4.2e-14)
          Length = 162

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -2

Query: 510 NRNMKKKTMKLNEESLRNALYIGRYQHTKLNGVNRTKYSMERPKVV-KPPPENSMDI 343
           N  +K+   KLN++ +  A+     Q  K+ G +R KY  E   +V +PPPE+ +++
Sbjct: 28  NDLLKEPAQKLNQDGI--AVLAAGVQE-KIEGDDRNKYKKEMDTLVSEPPPEHIVEV 81


>SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 642

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 176 PPTPRGVPLPAAPTPRPSVLAPLAAS 99
           PP+P  VP P AP  RP    P + S
Sbjct: 204 PPSPEPVPTPKAPASRPGTKRPASPS 229


>SB_20177| Best HMM Match : hATC (HMM E-Value=1e-04)
          Length = 618

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 176 PPTPRGVPLPAAPTPRPSVLAPLAAS 99
           PP+P  VP P AP  RP    P + S
Sbjct: 28  PPSPEPVPTPKAPASRPGTKRPASPS 53


>SB_1097| Best HMM Match : Rho_N (HMM E-Value=0.0007)
          Length = 211

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 200 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAP 111
           GA +    PP PR VPLP      PRPS + P
Sbjct: 37  GALTSTSPPPPPRRVPLPKLVKGLPRPSRITP 68


>SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2)
          Length = 238

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 574 HKYQSVQN*HSRWHHHADGDXRLHH 648
           HK+Q   + H  +HHH D D   HH
Sbjct: 96  HKWQHYHH-HHHYHHHLDYDHHYHH 119


>SB_58912| Best HMM Match : rve (HMM E-Value=2.2e-17)
          Length = 511

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 109 ERCSYCNRITPSQPSAPPY 127


>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
          Length = 1163

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 928 ERCSYCNRITPSQPSAPPY 946


>SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17)
          Length = 1017

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 615 ERCSYCNRITPSQPSAPPY 633


>SB_44164| Best HMM Match : rve (HMM E-Value=2.2e-17)
          Length = 292

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 79  ERCSYCNRITPSQPSAPPY 97


>SB_31873| Best HMM Match : rve (HMM E-Value=0.00063)
          Length = 302

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 163 ERCSYCNRITPSQPSAPPY 181


>SB_28953| Best HMM Match : rve (HMM E-Value=8.9e-07)
          Length = 555

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 163 ERCSYCNRITPSQPSAPPY 181


>SB_27406| Best HMM Match : rve (HMM E-Value=4e-17)
          Length = 315

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 23  ERCSYCNRITPSQPSAPPY 41


>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
          Length = 1229

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 862 ERCSYCNRITPSQPSAPPY 880


>SB_22996| Best HMM Match : Me-amine-dh_L (HMM E-Value=7.2)
          Length = 250

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 149 ERCSYCNRITPSQPSAPPY 167


>SB_22164| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 142

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 212 RSPGGAASYCGDPP-TPRGVPLPAAPTPRPSVLAPLAASAVRQQ 84
           RSP G AS   +   +P G   P A +P PSV +P   S+V  Q
Sbjct: 18  RSPTGTASPSENGSGSPEGSRSPEASSPPPSVQSPDGGSSVASQ 61


>SB_20221| Best HMM Match : RVT_1 (HMM E-Value=0.00045)
          Length = 955

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 871 ERCSYCNRITPSQPSAPPY 889


>SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5)
          Length = 398

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 355 ERCSYCNRITPSQPSAPPY 373


>SB_2133| Best HMM Match : rve (HMM E-Value=2.2e-17)
          Length = 425

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 23  ERCSYCNRITPSQPSAPPY 41


>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 762

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +2

Query: 188 NWPPLPGFCPIQPCFYQDINVDIPLEFQRIV-RHLYHLWMFYALVLALNIVGG 343
           +W   P F       YQ I   IP+E      RH Y L++  AL L   I+GG
Sbjct: 580 SWSTFPVFFGQVTSAYQGIGTLIPIESSMAENRHRYPLYLHLALGLLSAILGG 632


>SB_36452| Best HMM Match : Collagen (HMM E-Value=0.35)
          Length = 374

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 239 PGRSTAVWDRSPGGAASYCGDPPTPR 162
           PGR    W   PGGAA Y   P TP+
Sbjct: 34  PGRVGGEWYDHPGGAAEYVCLPETPQ 59


>SB_32624| Best HMM Match : rve (HMM E-Value=0.00042)
          Length = 415

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 276 ERCSYCNRITPSQPSAPPY 294


>SB_23879| Best HMM Match : rve (HMM E-Value=2.2e-17)
          Length = 1273

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339  EGCPYCSREVASRPSASPY 395
            E C YC+R   S+PSA PY
Sbjct: 1049 ERCSYCNRITPSQPSAPPY 1067


>SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18)
          Length = 838

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 469 ERCSYCNRITPSQPSAPPY 487


>SB_21919| Best HMM Match : rve (HMM E-Value=1.3e-16)
          Length = 378

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339 EGCPYCSREVASRPSASPY 395
           E C YC+R   S+PSA PY
Sbjct: 108 ERCSYCNRITPSQPSAPPY 126


>SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068)
          Length = 1502

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 339  EGCPYCSREVASRPSASPY 395
            E C YC+R   S+PSA PY
Sbjct: 1182 ERCSYCNRITPSQPSAPPY 1200


>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 440

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 176 PPTPRGVPLPAAPTPRPSVLAP 111
           PP P GVP P  P P P +  P
Sbjct: 306 PPLPAGVPAPPPPPPPPMLGGP 327


>SB_41466| Best HMM Match : Collagen (HMM E-Value=9.2)
          Length = 288

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 239 PGRSTAVWDRSPGGAASYCGDPPTPR 162
           PGR    W   PGGAA Y   P TP+
Sbjct: 86  PGRVGGEWLDHPGGAAEYVCLPETPQ 111


>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 800

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 359 RTVWTSLRLCSELRRARRTSTNGIDDGRSSGTRVVCRR*YPGRSTAVWDRS 207
           R +W+S    SEL  AR   ++G      SG RV+  R Y G +  +W  S
Sbjct: 663 RVIWSSSYRESELFGARVILSSGYQKFELSGVRVIGSRNYRG-ARVIWGSS 712


>SB_15824| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1258

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -3

Query: 200 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAAS 99
           GA +    PP PR VPLP      PRP  + P  AS
Sbjct: 87  GALTNTSPPPPPRRVPLPKLLKGLPRPPRIIPSNAS 122


>SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 971

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -3

Query: 200 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASAV 93
           GA +    PP PR VPLP      PRP  + P   S +
Sbjct: 169 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSEI 206


>SB_46327| Best HMM Match : Rho_N (HMM E-Value=4.2e-05)
          Length = 856

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -3

Query: 200 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAAS 99
           GA +    PP PR VPLP      PRP  + P  AS
Sbjct: 87  GALTNTSPPPPPRRVPLPKLLKGLPRPPRIIPSNAS 122


>SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 870

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
 Frame = -3

Query: 182 GDPPTPRGVPL------PAAPTPRPSVLAPLAASAVRQQTFL 75
           G PP   G+P+      P A +PRPS+L    +  +R+ T +
Sbjct: 510 GVPPASSGIPVSISTSNPNATSPRPSILRKRTSEGLRKPTIV 551


>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4072

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
 Frame = -3

Query: 239  PGRSTAV----WDRSPGGAASYCGDPPTPRGVPLPAAPTPRPSV 120
            PGRS  +      + P G AS    PP P+G P P  P  R  V
Sbjct: 3800 PGRSKNISGPPGPQGPPGQASQIPGPPGPQGPPGPPGPPGRDVV 3843


>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
          Length = 1080

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = -3

Query: 176 PPTPRG---VPLPAAPTPRPSVLAPLAAS 99
           PP P G   VP P  P+P PS L+PL+++
Sbjct: 807 PPLPEGLRPVPSPRTPSPMPS-LSPLSST 834


>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 330

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = -3

Query: 185 CGDPPTPRGVPLPA-APTPRP 126
           CGDPP P   P P   PTP P
Sbjct: 92  CGDPPPPATPPPPTMPPTPPP 112


>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
          Length = 2059

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -1

Query: 427  ETERREQDEIQYGEAEGREATSREQYGHPSDYVQS*DERVEHPQMV 290
            + ++R+Q E+Q  +AE R+    +Q G P    Q+ D++ +  Q V
Sbjct: 1747 QEQQRQQHELQQQQAEQRQRERSQQQGQPRQSQQN-DQQQQQQQGV 1791


>SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 970

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +1

Query: 280 PSSIPFVDVLRARLSSEHSRRDVHTVLGRWLHDLRPLHTVFRPVHAVQFR 429
           P S P  D  R   ++  SR  +H     W+  +RPL  V  P+   + R
Sbjct: 764 PPSSPSGDEWRQPFTARRSRPHLHGFKSIWIRWIRPLIRVINPLFYQRLR 813


>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
          Length = 1146

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
 Frame = -3

Query: 239  PGRSTAVWD-RSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASAVRQQ 84
            P  ST  +  R P GA      PP P  +  PA P      ++ L     RQQ
Sbjct: 957  PDGSTVYYQTRQPAGAPQQTPQPPQPAQIMRPAHPQMISQPVSSLGRLPTRQQ 1009


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,481,546
Number of Sequences: 59808
Number of extensions: 430042
Number of successful extensions: 1918
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1880
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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