BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l17f (658 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 119 2e-27 AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 119 2e-27 Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.54 Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.54 U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 30 1.3 U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 30 1.3 U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 30 1.3 U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 30 1.3 AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 30 1.7 U64859-11|AAC69097.2| 337|Caenorhabditis elegans Hypothetical p... 29 2.2 AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 29 2.2 Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 2.9 Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 29 2.9 AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical ... 29 2.9 AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 2.9 Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 3.8 AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical ... 29 3.8 U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 28 5.1 AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 28 5.1 AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 5.1 AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 5.1 AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 28 5.1 AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 28 5.1 Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 28 6.7 Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 28 6.7 Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 28 6.7 U80029-11|AAB37590.1| 155|Caenorhabditis elegans Hypothetical p... 28 6.7 U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 28 6.7 AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 28 6.7 AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 28 6.7 Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 27 8.9 Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 27 8.9 Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 27 8.9 Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 27 8.9 U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin... 27 8.9 U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 27 8.9 U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 27 8.9 M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 27 8.9 AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 27 8.9 >AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory carrier membrane protein protein. Length = 335 Score = 119 bits (287), Expect = 2e-27 Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 1/159 (0%) Frame = +2 Query: 170 SAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM- 346 +A R +NWPPLP PI+PCFYQDI V+IP++FQ+ V Y++++ Y L L +N++ + Sbjct: 112 NAPRPHNWPPLPTIIPIEPCFYQDIEVEIPVQFQKTVTFAYYVFLMYVLALVVNVLASLF 171 Query: 347 XXXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXT 526 LF+P SF+ W+RP+YKAFR+DSS T Sbjct: 172 YMIFAGGSIGQLFLACIQLALFSPCSFLFWFRPVYKAFRNDSSFNFMVFFFVLFFHCIFT 231 Query: 527 VVQSIGFSDGGSCGLITSISQFKTNIAVGIITLMVTIGF 643 VQ++G S+ +CG I ++ F ++ + ++ L+ I F Sbjct: 232 FVQTLGLSN-YACGWINALDTFNVSVPIALLMLISAITF 269 >AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic vesicle protein)homolog protein 1 protein. Length = 335 Score = 119 bits (287), Expect = 2e-27 Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 1/159 (0%) Frame = +2 Query: 170 SAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGM- 346 +A R +NWPPLP PI+PCFYQDI V+IP++FQ+ V Y++++ Y L L +N++ + Sbjct: 112 NAPRPHNWPPLPTIIPIEPCFYQDIEVEIPVQFQKTVTFAYYVFLMYVLALVVNVLASLF 171 Query: 347 XXXXXXXXXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXT 526 LF+P SF+ W+RP+YKAFR+DSS T Sbjct: 172 YMIFAGGSIGQLFLACIQLALFSPCSFLFWFRPVYKAFRNDSSFNFMVFFFVLFFHCIFT 231 Query: 527 VVQSIGFSDGGSCGLITSISQFKTNIAVGIITLMVTIGF 643 VQ++G S+ +CG I ++ F ++ + ++ L+ I F Sbjct: 232 FVQTLGLSN-YACGWINALDTFNVSVPIALLMLISAITF 269 >Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein ZK643.8 protein. Length = 774 Score = 31.5 bits (68), Expect = 0.54 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Frame = -3 Query: 302 STNGIDDGRSSGTRVVCRR*YPGRSTAVWDRSPGGAASYCGDP-PTPRGVPLPAAPTPRP 126 S+ G D G SSG Y G S++ + S GG + +P P P P + Sbjct: 412 SSGGGDAGASSGGESSSAGGYSGSSSSGGEASSGGYSGGSSEPAPAPEAAPASSGGYSGG 471 Query: 125 SVLAPLAASA 96 S AP AA A Sbjct: 472 SEAAPEAAPA 481 >Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein ZK643.8 protein. Length = 774 Score = 31.5 bits (68), Expect = 0.54 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Frame = -3 Query: 302 STNGIDDGRSSGTRVVCRR*YPGRSTAVWDRSPGGAASYCGDP-PTPRGVPLPAAPTPRP 126 S+ G D G SSG Y G S++ + S GG + +P P P P + Sbjct: 412 SSGGGDAGASSGGESSSAGGYSGSSSSGGEASSGGYSGGSSEPAPAPEAAPASSGGYSGG 471 Query: 125 SVLAPLAASA 96 S AP AA A Sbjct: 472 SEAAPEAAPA 481 >U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction molecule protein1, isoform b protein. Length = 944 Score = 30.3 bits (65), Expect = 1.3 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -3 Query: 176 PPTPRGVPL-PAAPTPRPSVLAPLAASAVRQQTFLTITLHY 57 PP P V L P+AP P P PL+++ V T T T HY Sbjct: 15 PPPPASVVLHPSAPPPPPP---PLSSTEVVGNTTTTTTTHY 52 >U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction molecule protein1, isoform c protein. Length = 1148 Score = 30.3 bits (65), Expect = 1.3 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -3 Query: 176 PPTPRGVPL-PAAPTPRPSVLAPLAASAVRQQTFLTITLHY 57 PP P V L P+AP P P PL+++ V T T T HY Sbjct: 15 PPPPASVVLHPSAPPPPPP---PLSSTEVVGNTTTTTTTHY 52 >U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction molecule protein1, isoform d protein. Length = 1439 Score = 30.3 bits (65), Expect = 1.3 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -3 Query: 176 PPTPRGVPL-PAAPTPRPSVLAPLAASAVRQQTFLTITLHY 57 PP P V L P+AP P P PL+++ V T T T HY Sbjct: 15 PPPPASVVLHPSAPPPPPP---PLSSTEVVGNTTTTTTTHY 52 >U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction molecule protein1, isoform a protein. Length = 1480 Score = 30.3 bits (65), Expect = 1.3 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -3 Query: 176 PPTPRGVPL-PAAPTPRPSVLAPLAASAVRQQTFLTITLHY 57 PP P V L P+AP P P PL+++ V T T T HY Sbjct: 15 PPPPASVVLHPSAPPPPPP---PLSSTEVVGNTTTTTTTHY 52 >AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical protein Y37H9A.3 protein. Length = 792 Score = 29.9 bits (64), Expect = 1.7 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -3 Query: 197 AASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASAV 93 AA G PP RG P PAAP P + L A+A+ Sbjct: 39 AAPARGAPPAARGRPAPAAPANVPGLDPRLLAAAL 73 >U64859-11|AAC69097.2| 337|Caenorhabditis elegans Hypothetical protein R09F10.8 protein. Length = 337 Score = 29.5 bits (63), Expect = 2.2 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = -1 Query: 445 RPVPAHETERREQDEIQYGEAEGREATSREQYGH 344 RP+ E E +QD+ +Y E E +E+ +++ H Sbjct: 239 RPIKKFEREEEDQDDDEYSEVEEKESHPKKRREH 272 >AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein 102 protein. Length = 460 Score = 29.5 bits (63), Expect = 2.2 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -3 Query: 239 PGRS-TAVWDRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASA 96 PG+ A D +PG A+YC P PR L A P+ AP AA+A Sbjct: 253 PGKDGDAGADGAPGTDAAYC--PCPPRSAALGAGGGAEPAGAAPEAAAA 299 >Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical protein T13F2.3b protein. Length = 1076 Score = 29.1 bits (62), Expect = 2.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -3 Query: 242 YPGRSTAVWDRSPGGAASYCGDPPTPRGVPLPAAPTPRP 126 YP ++ A +PG A G P TP+ P P+P Sbjct: 283 YPAQAPAAPRTTPGSAGPGTGPPGTPQRPQYPQGTNPQP 321 >Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical protein T13F2.3a protein. Length = 1074 Score = 29.1 bits (62), Expect = 2.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -3 Query: 242 YPGRSTAVWDRSPGGAASYCGDPPTPRGVPLPAAPTPRP 126 YP ++ A +PG A G P TP+ P P+P Sbjct: 281 YPAQAPAAPRTTPGSAGPGTGPPGTPQRPQYPQGTNPQP 319 >AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical protein C54G6.2 protein. Length = 700 Score = 29.1 bits (62), Expect = 2.9 Identities = 14/48 (29%), Positives = 29/48 (60%) Frame = -2 Query: 432 HTKLNGVNRTKYSMERPKVVKPPPENSMDIPPTMFRAKTSA*NIHKWY 289 H + N +++ +++PKV+ PPP N + PT +R ++S H+++ Sbjct: 52 HVQHNHISQN--GIQQPKVILPPP-NPYNTAPTHYRRRSST-EAHRYH 95 >AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical protein F41E6.11 protein. Length = 316 Score = 29.1 bits (62), Expect = 2.9 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -3 Query: 191 SYCGDPP--TPRGVPLPAAPTPRP-SVLAPLAASA 96 +YC PP P P+ A P PRP V AP A A Sbjct: 184 TYCAVPPCPAPAATPVYAQPAPRPMPVYAPAPACA 218 >Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical protein F47B8.13 protein. Length = 245 Score = 28.7 bits (61), Expect = 3.8 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = -3 Query: 242 YPGRSTAVW-DRSPGGAASYCGDPPTPRGVPLP-AAPTPRPSVLAPLAAS 99 YP + V D + GGAA P P P P AAP P P LA S Sbjct: 85 YPTKKRRVARDYAEGGAAPTAPAEPVPAPAPEPEAAPAPAPVAEPALAPS 134 Score = 28.7 bits (61), Expect = 3.8 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 242 YPGRSTAVW-DRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASA 96 YP + V D + GGAA P P P P AP P + LAP A A Sbjct: 159 YPAKKRRVARDYAEGGAAPAAPAEPAPEPAPAP-APAPE-AALAPETAPA 206 >AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical protein Y71F9AL.9 protein. Length = 314 Score = 28.7 bits (61), Expect = 3.8 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -3 Query: 176 PPTPRGVPLPAAPTPRPSVLAPLAASAVR 90 P T + P PA P P+V AP ++S + Sbjct: 86 PETTQSAPAPAKAAPAPTVAAPASSSVTK 114 >U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon guidance protein 2,isoform a protein. Length = 2886 Score = 28.3 bits (60), Expect = 5.1 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +1 Query: 280 PSSIPFVDVLRARLSSEHSRRDVHTVLGRWLHDLRPLHTV 399 P + F+D +R L S+H RD+ V LH + +H + Sbjct: 1134 PHVVDFIDSMRVNLESDHD-RDITVVTKLRLHFAKLIHLI 1172 >AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. Length = 2914 Score = 28.3 bits (60), Expect = 5.1 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +1 Query: 280 PSSIPFVDVLRARLSSEHSRRDVHTVLGRWLHDLRPLHTV 399 P + F+D +R L S+H RD+ V LH + +H + Sbjct: 1134 PHVVDFIDSMRVNLESDHD-RDITVVTKLRLHFAKLIHLI 1172 >AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily assigned gene nameprotein 343, isoform b protein. Length = 774 Score = 28.3 bits (60), Expect = 5.1 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 173 PTPRGVPLPAAPTPRPSVLAPL 108 PT R P+PA+P PRP P+ Sbjct: 98 PTIRPPPIPASPPPRPPASEPV 119 >AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily assigned gene nameprotein 343, isoform a protein. Length = 996 Score = 28.3 bits (60), Expect = 5.1 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 173 PTPRGVPLPAAPTPRPSVLAPL 108 PT R P+PA+P PRP P+ Sbjct: 320 PTIRPPPIPASPPPRPPASEPV 341 >AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical protein Y71H2AM.15a protein. Length = 933 Score = 28.3 bits (60), Expect = 5.1 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -3 Query: 176 PPTPRGVPLPAAPTPRPSVLAP 111 PP+P P+P P P P +L P Sbjct: 782 PPSPLTAPIPPPPPPPPPMLPP 803 >AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical protein Y71H2AM.15b protein. Length = 832 Score = 28.3 bits (60), Expect = 5.1 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -3 Query: 176 PPTPRGVPLPAAPTPRPSVLAP 111 PP+P P+P P P P +L P Sbjct: 681 PPSPLTAPIPPPPPPPPPMLPP 702 >Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical protein W01G7.1 protein. Length = 627 Score = 27.9 bits (59), Expect = 6.7 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -3 Query: 185 CGDPPTPRGVPLPAAPTPRPSVLAPLA 105 C PP P P P P P+P+ + P++ Sbjct: 509 CNRPPLPPLPPPPPPPKPKPAPVQPIS 535 >Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical protein F36A2.13 protein. Length = 2944 Score = 27.9 bits (59), Expect = 6.7 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -3 Query: 167 PRGVPL--PAAPTPRPSVLAPLAASAVRQQTFL 75 P VP+ P A P PS++A +AAS+ ++ L Sbjct: 1822 PANVPIVRPVAENPSPSIMASIAASSAARERAL 1854 >Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein F36A2.13 protein. Length = 2944 Score = 27.9 bits (59), Expect = 6.7 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -3 Query: 167 PRGVPL--PAAPTPRPSVLAPLAASAVRQQTFL 75 P VP+ P A P PS++A +AAS+ ++ L Sbjct: 1822 PANVPIVRPVAENPSPSIMASIAASSAARERAL 1854 >U80029-11|AAB37590.1| 155|Caenorhabditis elegans Hypothetical protein T20D4.7 protein. Length = 155 Score = 27.9 bits (59), Expect = 6.7 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%) Frame = +2 Query: 188 NW-PPLPGFCPIQPCFYQDINVDIPLEF 268 +W PP GF PI FY+++N + + F Sbjct: 49 HWCPPCRGFTPILKDFYEEVNEEFEIVF 76 >U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abnormality protein 6 protein. Length = 492 Score = 27.9 bits (59), Expect = 6.7 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -3 Query: 209 SPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASAVRQ 87 S G + S +P G P P+ P PRP LAP A R+ Sbjct: 297 SNGASPSVSPASTSPSG-PAPSIPPPRPPALAPPPPVAPRR 336 >AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer Formation DAF-5,a Ski oncogene homolog involved in a neuronal TGF betapathway (71.0 kD) (daf-5) protein. Length = 627 Score = 27.9 bits (59), Expect = 6.7 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -3 Query: 185 CGDPPTPRGVPLPAAPTPRPSVLAPLA 105 C PP P P P P P+P+ + P++ Sbjct: 509 CNRPPLPPLPPPPPPPKPKPAPVQPIS 535 >AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate adaptor protein CED-6 protein. Length = 492 Score = 27.9 bits (59), Expect = 6.7 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -3 Query: 209 SPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASAVRQ 87 S G + S +P G P P+ P PRP LAP A R+ Sbjct: 297 SNGASPSVSPASTSPSG-PAPSIPPPRPPALAPPPPVAPRR 336 >Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical protein F54F12.1 protein. Length = 1217 Score = 27.5 bits (58), Expect = 8.9 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = -3 Query: 179 DPPTPRGVPLPAAPTPRPSVLAP 111 DPP P V P P P P V AP Sbjct: 775 DPPAPLPVLPPVVPAPAPVVPAP 797 >Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical protein F53C11.5c protein. Length = 830 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = -3 Query: 176 PPTPRGVPLPAAPTPRPSVL-APLAASAVRQQTFLT 72 P +P P+ P+PRPS L AP + + T LT Sbjct: 418 PSQSSNIPPPSLPSPRPSALPAPGFSRQISSATTLT 453 >Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical protein F53C11.5b protein. Length = 891 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = -3 Query: 176 PPTPRGVPLPAAPTPRPSVL-APLAASAVRQQTFLT 72 P +P P+ P+PRPS L AP + + T LT Sbjct: 479 PSQSSNIPPPSLPSPRPSALPAPGFSRQISSATTLT 514 >Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical protein F53C11.5a protein. Length = 855 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = -3 Query: 176 PPTPRGVPLPAAPTPRPSVL-APLAASAVRQQTFLT 72 P +P P+ P+PRPS L AP + + T LT Sbjct: 443 PSQSSNIPPPSLPSPRPSALPAPGFSRQISSATTLT 478 >U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin converting enzyme)-like non-peptidase protein 1, isoform a protein. Length = 906 Score = 27.5 bits (58), Expect = 8.9 Identities = 11/34 (32%), Positives = 17/34 (50%) Frame = +2 Query: 224 PCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLA 325 PC Q I++D ++ L HLW+ Y +A Sbjct: 296 PCALQKIDMDSIFRNEKDASRLQHLWVSYVTAIA 329 >U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein F42C5.10 protein. Length = 1292 Score = 27.5 bits (58), Expect = 8.9 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%) Frame = +1 Query: 574 HKYQSVQN*HSRWHH-HADGDXRLHH 648 H Y +V H HH H DG +HH Sbjct: 938 HHYDTVHVQHHHHHHYHTDGSEHVHH 963 >U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein 173 protein. Length = 325 Score = 27.5 bits (58), Expect = 8.9 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -3 Query: 239 PGRSTAVWDRSPGGAASYCGDPPTPRG 159 PG+S A R P G ++C +P T G Sbjct: 298 PGKSGAAGARGPAGPCNHCPNPRTAPG 324 >M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.elegans heat shockprotein 4 gene, 3' end. ). Length = 288 Score = 27.5 bits (58), Expect = 8.9 Identities = 13/30 (43%), Positives = 13/30 (43%) Frame = -3 Query: 242 YPGRSTAVWDRSPGGAASYCGDPPTPRGVP 153 Y G V D G G PP PRGVP Sbjct: 99 YEGERPMVMDNHKLGNFDVTGIPPAPRGVP 128 >AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock protein protein 4 protein. Length = 657 Score = 27.5 bits (58), Expect = 8.9 Identities = 13/30 (43%), Positives = 13/30 (43%) Frame = -3 Query: 242 YPGRSTAVWDRSPGGAASYCGDPPTPRGVP 153 Y G V D G G PP PRGVP Sbjct: 468 YEGERPMVMDNHKLGNFDVTGIPPAPRGVP 497 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,966,078 Number of Sequences: 27780 Number of extensions: 308567 Number of successful extensions: 1710 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 1454 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1686 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1465835342 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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