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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l17f
         (658 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g32050.1 68414.m03943 secretory carrier membrane protein (SCA...    58   5e-09
At2g20840.1 68415.m02456 secretory carrier membrane protein (SCA...    54   6e-08
At1g61250.1 68414.m06902 secretory carrier membrane protein (SCA...    54   8e-08
At1g11180.1 68414.m01281 secretory carrier membrane protein (SCA...    48   5e-06
At1g03550.1 68414.m00336 secretory carrier membrane protein (SCA...    46   2e-05
At5g14460.1 68418.m01692 pseudouridylate synthase TruB family pr...    32   0.29 
At1g61080.1 68414.m06877 proline-rich family protein                   31   0.51 
At3g51330.1 68416.m05619 aspartyl protease family protein contai...    30   1.6  
At5g60920.1 68418.m07642 phytochelatin synthetase, putative / CO...    29   2.1  
At4g27850.1 68417.m03999 proline-rich family protein contains pr...    29   2.1  
At5g05090.1 68418.m00540 myb family transcription factor contain...    29   2.7  
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f...    28   4.8  
At4g24250.1 68417.m03480 seven transmembrane MLO family protein ...    28   4.8  
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex...    28   4.8  
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex...    28   4.8  
At2g44110.2 68415.m05486 seven transmembrane MLO family protein ...    28   4.8  
At2g44110.1 68415.m05485 seven transmembrane MLO family protein ...    28   4.8  
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro...    28   6.3  
At2g18915.2 68415.m02208 F-box family protein / LOV kelch protei...    28   6.3  
At2g18915.1 68415.m02207 F-box family protein / LOV kelch protei...    28   6.3  
At1g12580.1 68414.m01461 protein kinase family protein contains ...    28   6.3  
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic...    25   7.7  
At4g11380.1 68417.m01835 beta-adaptin, putative strong similarit...    27   8.3  
At4g04720.1 68417.m00693 calcium-dependent protein kinase, putat...    27   8.3  
At1g72250.1 68414.m08353 kinesin motor protein-related                 27   8.3  
At1g66080.1 68414.m07500 expressed protein                             27   8.3  

>At1g32050.1 68414.m03943 secretory carrier membrane protein (SCAMP)
           family protein contains Pfam domain, PF04144: SCAMP
           family
          Length = 264

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
 Frame = +2

Query: 188 NWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXXXXX 367
           NWPP   F PI    + DI  +IP+  Q++    +  W+   L L  N++  M       
Sbjct: 93  NWPP---FFPI---IHHDIAKEIPVHAQKLQYLAFASWLGIVLCLVFNVIATMVCWIKGG 146

Query: 368 XXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTVVQSIG- 544
                     Y ++  P S+V WYRP+Y+A R+DS+                 +V +I  
Sbjct: 147 GVKIFFLATIYALIGCPLSYVLWYRPLYRAMRTDSALKFGWFFFTYLIHIGFCIVAAIAP 206

Query: 545 --FSDGGS-CGLITSISQFKTNIAVGI 616
             F  G S  G++ +I     ++  GI
Sbjct: 207 PIFFHGKSLTGVLAAIDVISDSLLAGI 233


>At2g20840.1 68415.m02456 secretory carrier membrane protein (SCAMP)
           family protein contains Pfam domain, PF04144: SCAMP
           family
          Length = 282

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
 Frame = +2

Query: 188 NWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXXXXX 367
           NWPP   F P+    + DI+ +IP+  QRI    +   +   + L  NIV          
Sbjct: 93  NWPP---FFPL---IHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIKGE 146

Query: 368 XXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSSXXXXXXXXXXXXXXXXTVVQSIG- 544
                     YF+   P ++V WYRP+Y+A R+DS+                 V  ++  
Sbjct: 147 GPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCVFAAVAP 206

Query: 545 ---FSDGGSCGLITSISQFKTNIAVGIITLMVTIGF 643
              F      G++ +I     NI VGI    +  GF
Sbjct: 207 PIIFKGKSLTGILPAIDVLSGNILVGIF-YFIGFGF 241


>At1g61250.1 68414.m06902 secretory carrier membrane protein (SCAMP)
           family protein (SC3) contains Pfam domain, PF04144:
           SCAMP family
          Length = 289

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 30/96 (31%), Positives = 45/96 (46%)
 Frame = +2

Query: 188 NWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXXXXX 367
           NWPP   F P+    + DI  +IP+  QR+    +  ++   L L  NI+          
Sbjct: 100 NWPP---FFPL---IHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGE 153

Query: 368 XXXXXXXXXXYFVLFTPFSFVCWYRPIYKAFRSDSS 475
                     YF+   P  +V WYRP+Y+AFR+DS+
Sbjct: 154 GVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTDSA 189


>At1g11180.1 68414.m01281 secretory carrier membrane protein (SCAMP)
           family protein contains Pfam domain, PF04144: SCAMP
           family
          Length = 291

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 25/84 (29%), Positives = 38/84 (45%)
 Frame = +2

Query: 224 PCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXXXXXXXXXXXXXXXYF 403
           P  + DI  +I +  QR+    +  ++   L L  NI+                    YF
Sbjct: 108 PLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIYF 167

Query: 404 VLFTPFSFVCWYRPIYKAFRSDSS 475
           +   P  +V WYRP+Y+AFRSDS+
Sbjct: 168 ISGVPGGYVLWYRPLYRAFRSDSA 191


>At1g03550.1 68414.m00336 secretory carrier membrane protein (SCAMP)
           family protein contains Pfam domain, PF04144: SCAMP
           family
          Length = 283

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 4/148 (2%)
 Frame = +2

Query: 224 PCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMXXXXXXXXXXXXXXXXXYF 403
           P  + DI  +IP+  Q+I    +   +     L  NIV                    YF
Sbjct: 100 PLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYF 159

Query: 404 VLFTPFSFVCWYRPIYKAFRSDSS----XXXXXXXXXXXXXXXXTVVQSIGFSDGGSCGL 571
           +   P ++V WYRP+Y+A R+DS+                     V   + F      G 
Sbjct: 160 LAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFCGFAAVAPPVIFQGKSLTGF 219

Query: 572 ITSISQFKTNIAVGIITLMVTIGFITCV 655
           + +I    TN AVGI+   +  GF  C+
Sbjct: 220 LPAIELLTTNAAVGIM-YFIGAGFF-CI 245


>At5g14460.1 68418.m01692 pseudouridylate synthase TruB family
           protein similar to SP|P09171 tRNA pseudouridine synthase
           B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase)
           (Pseudouridylate synthase) (Uracil hydrolyase)
           {Escherichia coli O157:H7}; contains Pfam profile
           PF01509: TruB family pseudouridylate synthase (N
           terminal domain)
          Length = 540

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -3

Query: 350 WTSLRLCSELRR---ARRTSTNGIDDGRSSGTRVVCRR*YPGRSTAVWDRSPGGAASYCG 180
           WTS  +C +LRR    ++    G  D  ++G  +VC     G++T V DR  G    Y G
Sbjct: 332 WTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVC----VGKATKVVDRYQGMIKGYSG 387


>At1g61080.1 68414.m06877 proline-rich family protein 
          Length = 907

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = -3

Query: 281 GRSSGTRVVCRR*YPGRSTAVWDRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAA 102
           G++S +RV+     P  S +    S G   S+CG P TPR V LP +    P  +   A 
Sbjct: 245 GKTSSSRVLS----PSESFSDSKSSFGSRNSFCGSPTTPRSV-LPESMMGSPGRVGDFAN 299

Query: 101 SA 96
           SA
Sbjct: 300 SA 301


>At3g51330.1 68416.m05619 aspartyl protease family protein contains
           Eukaryotic and viral aspartyl proteases active site,
           PROSITE:PS00141
          Length = 529

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 176 PPTPRGVPLPAAPTPRPSVLAPLAASAVRQ 87
           PP     P P+A TP PS+L P AA+   Q
Sbjct: 465 PPPETEAPSPSASTPLPSLLPPPAAATPPQ 494


>At5g60920.1 68418.m07642 phytochelatin synthetase, putative / COBRA
           cell expansion protein COB, putative similar to
           phytochelatin synthetase GI:29570314; similar to
           GB:AAK56072; identified in Roudier, et al, Plant Phys.
           (2002) 130:538-548 (PMID:12376623); identical to cDNA
           putative phytochelatin synthetase GI:3559804; contains
           Pfam profile PF04833: Phytochelatin synthetase-like
           conserved region
          Length = 456

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -3

Query: 215 DRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASAVRQQTFLTITLHYRNNKNTD 36
           +R+  GA   C DP TP    + + PT + +VL PL     R    + +  H + N    
Sbjct: 258 NRTESGA---CLDPDTPHLASVVSPPTKKGTVLPPL-VQCTRHMCPIRVHWHVKQNYKEY 313

Query: 35  RRAKCT 18
            R K T
Sbjct: 314 WRVKIT 319


>At4g27850.1 68417.m03999 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 577

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -3

Query: 239 PGRSTAVWDRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPL 108
           PG  + +    P       G PP+P   P P +P P P   +PL
Sbjct: 184 PGPDSPLPSPGPDSPLPLPGPPPSPSPTPGPDSPLPSPGPDSPL 227



 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 182 GDPPTPRGVPLPAAPTPRPSVLAPL 108
           G PP+P   P P +P P P   +PL
Sbjct: 250 GPPPSPSPTPGPDSPLPSPGPDSPL 274


>At5g05090.1 68418.m00540 myb family transcription factor contains
           Pfam profile: PF00249 myb-like DNA-binding domain
          Length = 266

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 134 PRPSVLAPLAASAVRQQTFLTITLHYRNNKNTDRRAKCTSP 12
           P P  L PL+ S +     +   LH  NN N+ +    T+P
Sbjct: 17  PSPEELIPLSQSLITPDLAIAFDLHRNNNSNSGQPLPQTTP 57


>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
           family protein / zinc finger (MYND type) family protein
           similar to ubiquitin-specific protease 15 (UBP15)
           [Arabidopsis thaliana] GI:11993475; contains Pfam
           profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
           PF01753: MYND finger
          Length = 631

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 185 CGDPPTPRGVPLPA-APTPRPSVLAPLAASAVRQ 87
           C   P+P   P P+ +P+P PSVLA    S V +
Sbjct: 529 CEQSPSPSPSPSPSPSPSPSPSVLASECCSEVER 562


>At4g24250.1 68417.m03480 seven transmembrane MLO family protein /
           MLO-like protein 13 (MLO13) identical to membrane
           protein Mlo13 [Arabidopsis thaliana]
           gi|14091596|gb|AAK53806; similar to MLO protein
           SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum
           vulgare][Barley]
          Length = 478

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +2

Query: 254 IPLEFQRIVRHLYHLWMFYALVLALNIVG 340
           + ++F+++V   ++LW+F  + L LN+ G
Sbjct: 270 LEIDFKKVVSISWYLWLFVVVFLLLNVGG 298


>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 839

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -3

Query: 209 SPGGAASYCGDPPTPRGVPLPAAPTPRP 126
           SP    S  G PP+P  VP P + TP P
Sbjct: 438 SPPTTPSPGGSPPSPSIVPSPPSTTPSP 465


>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 956

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 215 DRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAP 111
           D+  GG     G  P+P+  P P AP P+  +  P
Sbjct: 395 DKCAGGGGG--GSNPSPKPTPTPKAPEPKKEINPP 427


>At2g44110.2 68415.m05486 seven transmembrane MLO family protein /
           MLO-like protein 15 (MLO15) identical to MLO-like
           protein 15 (AtMlo15) SP:O80580 from [Arabidopsis
           thaliana]; similar to MLO protein SWISS-PROT:P93766,
           NCBI_gi:1877221 [Hordeum vulgare][Barley]
          Length = 497

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 263 EFQRIVRHLYHLWMFYALVLALNIV 337
           +F+++V   ++LW+F  L L LNIV
Sbjct: 270 DFKKVVGISWYLWVFVVLFLLLNIV 294


>At2g44110.1 68415.m05485 seven transmembrane MLO family protein /
           MLO-like protein 15 (MLO15) identical to MLO-like
           protein 15 (AtMlo15) SP:O80580 from [Arabidopsis
           thaliana]; similar to MLO protein SWISS-PROT:P93766,
           NCBI_gi:1877221 [Hordeum vulgare][Barley]
          Length = 496

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 263 EFQRIVRHLYHLWMFYALVLALNIV 337
           +F+++V   ++LW+F  L L LNIV
Sbjct: 269 DFKKVVGISWYLWVFVVLFLLLNIV 293


>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
           protein similar to PIR|JC7196 phytocyanin-related
           protein Pn14 {Ipomoea nil}; contains Pfam profile
           PF02298: Plastocyanin-like domain
          Length = 349

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 18/53 (33%), Positives = 22/53 (41%)
 Frame = -3

Query: 239 PGRSTAVWDRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASAVRQQT 81
           PG ST      PGGA S     P       P + TP     +P ++SAV   T
Sbjct: 145 PGSSTPGSMTPPGGAHSPKSSSPVSPTTSPPGSTTPPGGAHSPKSSSAVSPAT 197


>At2g18915.2 68415.m02208 F-box family protein / LOV kelch protein 2
           (LKP2) / adagio 2 (ADO2) E3 ubiquitin ligase SCF complex
           F-box subunit; identical to Adagio 2 GI:13487070 from
           [Arabidopsis thaliana]; contains Pfam profiles PF01344:
           Kelch motif and PF00646: F-box domain; identical to cDNA
           LOV kelch protein 2 GI:18146957; identical to cDNA
           Adagio 2 (ADO2) GI:13487069
          Length = 611

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 166 GVGGS-PQ*LAAPPGLLSHTAVLLPG 240
           G G S P  +AAPP  L H A+ LPG
Sbjct: 500 GYGSSLPGGMAAPPPRLDHVAISLPG 525


>At2g18915.1 68415.m02207 F-box family protein / LOV kelch protein 2
           (LKP2) / adagio 2 (ADO2) E3 ubiquitin ligase SCF complex
           F-box subunit; identical to Adagio 2 GI:13487070 from
           [Arabidopsis thaliana]; contains Pfam profiles PF01344:
           Kelch motif and PF00646: F-box domain; identical to cDNA
           LOV kelch protein 2 GI:18146957; identical to cDNA
           Adagio 2 (ADO2) GI:13487069
          Length = 601

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 166 GVGGS-PQ*LAAPPGLLSHTAVLLPG 240
           G G S P  +AAPP  L H A+ LPG
Sbjct: 490 GYGSSLPGGMAAPPPRLDHVAISLPG 515


>At1g12580.1 68414.m01461 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069; contains similarity
           to calcium-dependent protein kinase GI:5162877 from
           [Marchantia polymorpha]
          Length = 522

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 475 RGVAPERLVYRPVPAHETERREQDEIQYGEAEGREATSREQ 353
           R  +P+RL+  P  + + ERR++      EA G+  T RE+
Sbjct: 426 RDSSPKRLLPSPDSSSQLERRDEAGENQTEAGGKSETRRER 466


>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
           to gi_11935088_gb_AAG41964
          Length = 209

 Score = 25.4 bits (53), Expect(2) = 7.7
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = -3

Query: 209 SPGGAASYCGDPPTPRGVPLPAAPTPRPS 123
           SP   A     PP P   P+   P P PS
Sbjct: 104 SPPVPAPVADSPPAPVAAPVADVPAPAPS 132



 Score = 20.6 bits (41), Expect(2) = 7.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 146 AAPTPRPSVLAPLA 105
           AAP P P +L P A
Sbjct: 146 AAPAPAPELLGPPA 159


>At4g11380.1 68417.m01835 beta-adaptin, putative strong similarity
           to SP|Q10567 Adapter-related protein complex 1 beta 1
           subunit (Beta-adaptin 1) [Homo sapiens], beta-adaptin
           [Drosophila melanogaster] GI:434902; contains Pfam
           profile: PF01602 Adaptin N terminal region
          Length = 894

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 197 AASYCGDPPTPRG-VPLPAAPTPRPSVLAPL 108
           AAS  G+ P P G  P PA P P P +L  L
Sbjct: 615 AASPPGNIPQPSGRQPAPAVPAPVPDLLGDL 645


>At4g04720.1 68417.m00693 calcium-dependent protein kinase, putative
           / CDPK, putative similar to calcium-dependent protein
           kinase(CDPK) [Carrot] SWISS-PROT:P28582
          Length = 531

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +1

Query: 262 RVPEDRPSSIPFVDVLRARLSSEHSRRDVHTVLGRWLHDLRPLHTVFRPVHAVQFRV 432
           + P  +P + P    +    S+  S RD  T+LG+   D+R  +++ + +   QF +
Sbjct: 37  QTPTPKPMTQPIHQQISTPSSNPVSVRDPDTILGKPFEDIRKFYSLGKELGRGQFGI 93


>At1g72250.1 68414.m08353 kinesin motor protein-related
          Length = 1195

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 152  LPAAPTPRPSVLAPLAASAVRQQTFLT 72
            +P+AP PR S LAP   S  R+  +LT
Sbjct: 994  IPSAPAPRRSSLAP-TTSTSREMVYLT 1019


>At1g66080.1 68414.m07500 expressed protein
          Length = 190

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -3

Query: 239 PGRSTAVWDRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAASA 96
           P ++ AV+ +SPG A  +CG     R   + +   P P   A +  +A
Sbjct: 56  PDKALAVYVQSPGSAFVFCGAVTLARPSAVLSLQWPEPGSAAKMQLTA 103


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,135,956
Number of Sequences: 28952
Number of extensions: 281842
Number of successful extensions: 1447
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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