BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l15r (779 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.064 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.2 X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 21 9.7 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 28.7 bits (61), Expect = 0.064 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +3 Query: 231 DDSHSERGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAAR 350 D + ++ + + A L G++Q+S + PP GP PA + Sbjct: 354 DSAKLDKIFDIATKENAMLLSGRSQKSTTGPPPGPTPAQK 393 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 23.0 bits (47), Expect = 3.2 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 Query: 282 TTLHGQAQRSLSPPPRGPKPAARQ 353 +TL A R PPP P P++ Q Sbjct: 1343 STLERTAWRQQQPPPPPPPPSSGQ 1366 >X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor protein. Length = 168 Score = 21.4 bits (43), Expect = 9.7 Identities = 11/35 (31%), Positives = 15/35 (42%) Frame = +3 Query: 249 RGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAARQ 353 R A +RR + G + P PR P P R+ Sbjct: 28 RPARLRREAKPEAEPGNNRPIYIPQPRPPHPRLRR 62 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 175,883 Number of Sequences: 438 Number of extensions: 3423 Number of successful extensions: 13 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 24518154 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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