BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10l15f (616 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 27 0.36 AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 24 3.4 AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 24 3.4 AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 24 3.4 AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 24 3.4 AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 5.9 AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 7.8 >AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp protein. Length = 474 Score = 27.5 bits (58), Expect = 0.36 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +3 Query: 21 GTVVSLERSASAPGFPLKCV 80 G + LER+ S PG P KCV Sbjct: 60 GAIEELERALSCPGQPSKCV 79 >AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. Length = 285 Score = 24.2 bits (50), Expect = 3.4 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 111 SERSQKTPSSRSEVEINEELQR 176 S+ S +TP S +++ NE LQR Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175 >AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. Length = 285 Score = 24.2 bits (50), Expect = 3.4 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 111 SERSQKTPSSRSEVEINEELQR 176 S+ S +TP S +++ NE LQR Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175 >AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. Length = 285 Score = 24.2 bits (50), Expect = 3.4 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 111 SERSQKTPSSRSEVEINEELQR 176 S+ S +TP S +++ NE LQR Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175 >AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. Length = 285 Score = 24.2 bits (50), Expect = 3.4 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 111 SERSQKTPSSRSEVEINEELQR 176 S+ S +TP S +++ NE LQR Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175 >AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. Length = 3398 Score = 23.4 bits (48), Expect = 5.9 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +1 Query: 517 VCETCGRCRCEQCARPRPLPSRW 585 VC + C E+ A+ R LPSRW Sbjct: 553 VCASWPLCG-EKSAKKRKLPSRW 574 >AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium channel alpha subunitprotein. Length = 2139 Score = 23.0 bits (47), Expect = 7.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +3 Query: 114 ERSQKTPSSRSEVEINEELQRGSGDDEGTGRRRP 215 E +K +S+ ++ I+EEL DDEG G P Sbjct: 1217 EGEEKRDASKEDLGIDEEL-----DDEGEGDEGP 1245 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 476,205 Number of Sequences: 2352 Number of extensions: 7029 Number of successful extensions: 30 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 30 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 60132501 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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