Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10l09r
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...   262   1e-70
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...   262   1e-70
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...   262   1e-70
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...   258   4e-69
Z66511-6|CAA91318.1|  343|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z66515-1|CAA91347.1|  218|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81521-4|CAB04229.1|  367|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score =  262 bits (643), Expect = 1e-70
 Identities = 127/220 (57%), Positives = 155/220 (70%), Gaps = 4/220 (1%)
 Frame = -3

Query: 743 LCKVAEAAPXDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXA 564
           LCKV   AP +KV LLGCG+ TGYGA LNT KVE GS  A++                 A
Sbjct: 160 LCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGA 219

Query: 563 NRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEYTFECIGNV 396
            +I+G+D+   KFE AK FG  E +NPK  + P     Q  LV+  DGG +YTFECIGNV
Sbjct: 220 KKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNV 279

Query: 395 GTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLV 216
            TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWKGTAFGG+KS ESVP+LV
Sbjct: 280 HTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLV 339

Query: 215 DEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRAVV 96
           D+Y+ KKL +DEF+TH   + +IN AF ++H G+S+R+V+
Sbjct: 340 DDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVL 379


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score =  262 bits (643), Expect = 1e-70
 Identities = 127/220 (57%), Positives = 155/220 (70%), Gaps = 4/220 (1%)
 Frame = -3

Query: 743 LCKVAEAAPXDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXA 564
           LCKV   AP +KV LLGCG+ TGYGA LNT KVE GS  A++                 A
Sbjct: 160 LCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGA 219

Query: 563 NRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEYTFECIGNV 396
            +I+G+D+   KFE AK FG  E +NPK  + P     Q  LV+  DGG +YTFECIGNV
Sbjct: 220 KKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNV 279

Query: 395 GTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLV 216
            TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWKGTAFGG+KS ESVP+LV
Sbjct: 280 HTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLV 339

Query: 215 DEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRAVV 96
           D+Y+ KKL +DEF+TH   + +IN AF ++H G+S+R+V+
Sbjct: 340 DDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVL 379


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score =  262 bits (643), Expect = 1e-70
 Identities = 127/220 (57%), Positives = 155/220 (70%), Gaps = 4/220 (1%)
 Frame = -3

Query: 743 LCKVAEAAPXDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXA 564
           LCKV   AP +KV LLGCG+ TGYGA LNT KVE GS  A++                 A
Sbjct: 162 LCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGA 221

Query: 563 NRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEYTFECIGNV 396
            +I+G+D+   KFE AK FG  E +NPK  + P     Q  LV+  DGG +YTFECIGNV
Sbjct: 222 KKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNV 281

Query: 395 GTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLV 216
            TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWKGTAFGG+KS ESVP+LV
Sbjct: 282 HTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLV 341

Query: 215 DEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRAVV 96
           D+Y+ KKL +DEF+TH   + +IN AF ++H G+S+R+V+
Sbjct: 342 DDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVL 381


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score =  258 bits (631), Expect = 4e-69
 Identities = 124/218 (56%), Positives = 151/218 (69%), Gaps = 4/218 (1%)
 Frame = -3

Query: 743 LCKVAEAAPXDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXA 564
           LCKV   AP +KV LLGCG+ TGYGA LNT KVE GS  A++                 A
Sbjct: 333 LCKVNPQAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGA 392

Query: 563 NRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEYTFECIGNV 396
            +I+G+D+   KFE AK FG  E +NPK  + P     Q  LV+  DGG +YTFECIGNV
Sbjct: 393 KKIVGIDLIESKFEKAKMFGATECINPKSVELPEGKSFQSWLVEQFDGGFDYTFECIGNV 452

Query: 395 GTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLV 216
            TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWKGTAFGG+KS ESVP+LV
Sbjct: 453 HTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLV 512

Query: 215 DEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKSIRA 102
           D+Y+ KKL +DEF+TH   + +IN AF ++  G+ +R+
Sbjct: 513 DDYMNKKLLIDEFITHRCNIDDINAAFDVLRKGEGLRS 550


>Z66511-6|CAA91318.1|  343|Caenorhabditis elegans Hypothetical
           protein F07A11.5 protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 539 NPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTD 435
           N   FE+A+  GV  F+NP   D  + + +++L D
Sbjct: 179 NRRAFEIARSHGVTTFLNPAPGDPNMDKTILELVD 213


>Z66515-1|CAA91347.1|  218|Caenorhabditis elegans Hypothetical
           protein R53.2 protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 233 SVPKLVDEYLEKKLPLDEFVTH 168
           S+ KL+D+YL K++ +DE   H
Sbjct: 59  SIGKLIDQYLRKEIDMDEHALH 80


>Z81521-4|CAB04229.1|  367|Caenorhabditis elegans Hypothetical
           protein F32A11.6 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +1

Query: 250 PPKAVPFQVRPVTSWNGRVLISSPAAATPMITDTPHPLWQASSAALMVP 396
           P   +  Q  P+ S +    + SP A     T  PHP W   S++  +P
Sbjct: 246 PMGGLEMQSSPMKSSSDSSHMRSPMAQMNCETTRPHPSWPLESSSFFLP 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,382,381
Number of Sequences: 27780
Number of extensions: 334197
Number of successful extensions: 911
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)